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CAN33_18400-T1, CAN33_18400-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18400-T1
Unique NameCAN33_18400-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1383021..1384578-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18400-T1 ID=CAN33_18400-T1|Name=CAN33_18400-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1558bp|location=Sequence derived from alignment at NKJJ01000011.1:1383021..1384578- (Aspergillus niger FDAARGOS_311)
ATGGTCTACATTGGGATCCCCCAGCACTACACGACGTCGCCGTCCTCTTT
CATGGGGACCCCGTCCTTGACGATCAACCATGAGGCAACCCAGGATCTTG
ATTCCACCAACGCCTTCGAAGGTATGTGGCTGTGATACTAGTGGCTCTAT
GTTGGAAAAAAATACTGACGTGAATGAAGGCCCCGAGAAGCTTCTGGAGG
TTTGGTTTGCCCCGTCCGCTCAGGAACTGGGTTCTGCCGGTCCTGCCGGC
TTGAAGGCTGTGCCTGAAGAGATCTGGAAGGATATGCTTGACCTCGTCAA
CTGCCAAGTGCTCTCCATCGTCTCGTCCGAGGATGTCGACGCCTATCTCT
TGTCCGAGTCCAGCATGTTCGTCTGGCCGCACAAGTTGATCCTGAAGACC
TGTGGTACGACGACCCTGCTGTCGGGACTTCCGCGCATTCTCGAAGTTGC
CGCTCTGTTTGGTGGCTTCCCTCGCGCTACCGCACCTGCTTCCCGCGGCA
TCTCCGTCGCTGCGGCCCCGTACCGTGTGTTCTACAGCCGCAAGAACTTC
CTCTTCCCCGACCGTCAGCGCGGTCCCCACCGCAGCTGGAGAGACGAGGT
TCGCACCATGGACAAACTCTTCCTCAACGGCAGCGCCTACATGATTGGCA
AGATGAACGGCGAGCACTGGTACCTCTACCTGACTGAGCCCAACACCTTG
CTCACTCCCCCGACCAGCCCTCGCGTCGAGTCGGAGGATCCGGTGACCGA
GACCAAGGTGCTTCAAGTGCCCGCAGCTGGTGCCTACCAGACGCGCGAAG
ACCAGGACGAGACTCTGGAGGTGTTGATGACCGACCTGGATGAGGAGAAC
GCCAAGCAGTTCTACCTGGACCACGCTACTGCTGTTGCCGAGAAGCGTTA
CTGCAACTTCGAAGCCGACAATGATGACCACGTTGATGTCTTCAGCAACA
ACTCCGACATGGATGATGTGTCGTCCAACGGCAGCCGCGTCTTGCCCCCT
GAGCTGACTACCGAGGGTCATGCTTTGGGAACGGTCGTGTCGGAGTCGTG
TGGTCTTTCGGACGTCTATCCGAAGTCCAAGTTCCCCGAGTCTCGGATCG
ACGCCTACCTGTTTACCCCGTGCGGATTCTCCGCCAACGGCGTCATCCCC
ACGCCTGACCAGAACACCGGAACGCACTACTTCACGGTGCATGTGACTCC
GGAGCCTCACTGCTCGTATGCGTCGTTTGAGACCAACGTGCCGCACTCGC
AGAACGGCCAGACTACGCAGGAGATTATTCAGCAGGTGGTGAACATCTTC
AAGCCTGGACGCTTTACGGTGACCTTGTTCGAGGCTAAGCCTGAGACTAC
TACCGCCGACGGCGAGTTGGACCACATCAAGGAGGTCAAGTACATTGAGC
GGCAGGCGGCTCGTCGCACCAAGATGGAAAATGTGGCAGGATATCGTCGG
GTGGATCGGATCGTGCATGACTTGGACGGATATGACCTCGTGTTCCGCTA
CTACGAACGTCTTGACTGGAAAGGGGGGGCCCCTCGGCTCGGAGAAGAGC
GCGTTTGA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1383021..1384578-

>CAN33_18400-T1 ID=CAN33_18400-T1|Name=CAN33_18400-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3000bp|location=Sequence derived from alignment at NKJJ01000011.1:1383021..1384578- (Aspergillus niger FDAARGOS_311)
GCCCCGAGAAGCTTCTGGAGGTTTGGTTTGCCCCGTCCGCTCAGGAACTG
GGTTCTGCCGGTCCTGCCGGCTTGAAGGCTGTGCCTGAAGAGATCTGGAA
GGATATGCTTGACCTCGTCAACTGCCAAGTGCTCTCCATCGTCTCGTCCG
AGGATGTCGACGCCTATCTCTTGTCCGAGTCCAGCATGTTCGTCTGGCCG
CACAAGTTGATCCTGAAGACCTGTGGTACGACGACCCTGCTGTCGGGACT
TCCGCGCATTCTCGAAGTTGCCGCTCTGTTTGGTGGCTTCCCTCGCGCTA
CCGCACCTGCTTCCCGCGGCATCTCCGTCGCTGCGGCCCCGTACCGTGTG
TTCTACAGCCGCAAGAACTTCCTCTTCCCCGACCGTCAGCGCGGTCCCCA
CCGCAGCTGGAGAGACGAGGTTCGCACCATGGACAAACTCTTCCTCAACG
GCAGCGCCTACATGATTGGCAAGATGAACGGCGAGCACTGGTACCTCTAC
CTGACTGAGCCCAACACCTTGCTCACTCCCCCGACCAGCCCTCGCGTCGA
GTCGGAGGATCCGGTGACCGAGACCAAGGTGCTTCAAGTGCCCGCAGCTG
GTGCCTACCAGACGCGCGAAGACCAGGACGAGACTCTGGAGGTGTTGATG
ACCGACCTGGATGAGGAGAACGCCAAGCAGTTCTACCTGGACCACGCTAC
TGCTGTTGCCGAGAAGCGTTACTGCAACTTCGAAGCCGACAATGATGACC
ACGTTGATGTCTTCAGCAACAACTCCGACATGGATGATGTGTCGTCCAAC
GGCAGCCGCGTCTTGCCCCCTGAGCTGACTACCGAGGGTCATGCTTTGGG
AACGGTCGTGTCGGAGTCGTGTGGTCTTTCGGACGTCTATCCGAAGTCCA
AGTTCCCCGAGTCTCGGATCGACGCCTACCTGTTTACCCCGTGCGGATTC
TCCGCCAACGGCGTCATCCCCACGCCTGACCAGAACACCGGAACGCACTA
CTTCACGGTGCATGTGACTCCGGAGCCTCACTGCTCGTATGCGTCGTTTG
AGACCAACGTGCCGCACTCGCAGAACGGCCAGACTACGCAGGAGATTATT
CAGCAGGTGGTGAACATCTTCAAGCCTGGACGCTTTACGGTGACCTTGTT
CGAGGCTAAGCCTGAGACTACTACCGCCGACGGCGAGTTGGACCACATCA
AGGAGGTCAAGTACATTGAGCGGCAGGCGGCTCGTCGCACCAAGATGGAA
AATGTGGCAGGATATCGTCGGGTGGATCGGATCGTGCATGACTTGGACGG
ATATGACCTCGTGTTCCGCTACTACGAACGTCTTGACTGGAAAGGGGGGG
CCCCTCGGCTCGGAGAAGAGCGCGTTTGAATGGTCTACATTGGGATCCCC
CAGCACTACACGACGTCGCCGTCCTCTTTCATGGGGACCCCGTCCTTGAC
GATCAACCATGAGGCAACCCAGGATCTTGATTCCACCAACGCCTTCGAAG
GCCCCGAGAAGCTTCTGGAGGTTTGGTTTGCCCCGTCCGCTCAGGAACTG
GGTTCTGCCGGTCCTGCCGGCTTGAAGGCTGTGCCTGAAGAGATCTGGAA
GGATATGCTTGACCTCGTCAACTGCCAAGTGCTCTCCATCGTCTCGTCCG
AGGATGTCGACGCCTATCTCTTGTCCGAGTCCAGCATGTTCGTCTGGCCG
CACAAGTTGATCCTGAAGACCTGTGGTACGACGACCCTGCTGTCGGGACT
TCCGCGCATTCTCGAAGTTGCCGCTCTGTTTGGTGGCTTCCCTCGCGCTA
CCGCACCTGCTTCCCGCGGCATCTCCGTCGCTGCGGCCCCGTACCGTGTG
TTCTACAGCCGCAAGAACTTCCTCTTCCCCGACCGTCAGCGCGGTCCCCA
CCGCAGCTGGAGAGACGAGGTTCGCACCATGGACAAACTCTTCCTCAACG
GCAGCGCCTACATGATTGGCAAGATGAACGGCGAGCACTGGTACCTCTAC
CTGACTGAGCCCAACACCTTGCTCACTCCCCCGACCAGCCCTCGCGTCGA
GTCGGAGGATCCGGTGACCGAGACCAAGGTGCTTCAAGTGCCCGCAGCTG
GTGCCTACCAGACGCGCGAAGACCAGGACGAGACTCTGGAGGTGTTGATG
ACCGACCTGGATGAGGAGAACGCCAAGCAGTTCTACCTGGACCACGCTAC
TGCTGTTGCCGAGAAGCGTTACTGCAACTTCGAAGCCGACAATGATGACC
ACGTTGATGTCTTCAGCAACAACTCCGACATGGATGATGTGTCGTCCAAC
GGCAGCCGCGTCTTGCCCCCTGAGCTGACTACCGAGGGTCATGCTTTGGG
AACGGTCGTGTCGGAGTCGTGTGGTCTTTCGGACGTCTATCCGAAGTCCA
AGTTCCCCGAGTCTCGGATCGACGCCTACCTGTTTACCCCGTGCGGATTC
TCCGCCAACGGCGTCATCCCCACGCCTGACCAGAACACCGGAACGCACTA
CTTCACGGTGCATGTGACTCCGGAGCCTCACTGCTCGTATGCGTCGTTTG
AGACCAACGTGCCGCACTCGCAGAACGGCCAGACTACGCAGGAGATTATT
CAGCAGGTGGTGAACATCTTCAAGCCTGGACGCTTTACGGTGACCTTGTT
CGAGGCTAAGCCTGAGACTACTACCGCCGACGGCGAGTTGGACCACATCA
AGGAGGTCAAGTACATTGAGCGGCAGGCGGCTCGTCGCACCAAGATGGAA
AATGTGGCAGGATATCGTCGGGTGGATCGGATCGTGCATGACTTGGACGG
ATATGACCTCGTGTTCCGCTACTACGAACGTCTTGACTGGAAAGGGGGGG
CCCCTCGGCTCGGAGAAGAGCGCGTTTGAATGGTCTACATTGGGATCCCC
CAGCACTACACGACGTCGCCGTCCTCTTTCATGGGGACCCCGTCCTTGAC
GATCAACCATGAGGCAACCCAGGATCTTGATTCCACCAACGCCTTCGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004014adenosylmethionine decarboxylase activity
Vocabulary: Biological Process
TermDefinition
GO:0006597spermine biosynthetic process
GO:0008295spermidine biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_18400CAN33_18400Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18400-T1CAN33_18400-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18400-T1.cdsCAN33_18400-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18400-T1.exon2CAN33_18400-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_18400-T1.exon1CAN33_18400-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000111.9
NoteBUSCO:EOG09263LNF
DBxrefInterPro:IPR016067
DBxrefInterPro:IPR018166
DBxrefInterPro:IPR001985
DBxrefPFAM:PF01536
ProductAdenosylmethionine decarboxylase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1383021..1384578 -
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