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CAN33_18495-T1, CAN33_18495-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18495-T1
Unique NameCAN33_18495-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1432471..1433958+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18495-T1 ID=CAN33_18495-T1|Name=CAN33_18495-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1488bp|location=Sequence derived from alignment at NKJJ01000011.1:1432471..1433958+ (Aspergillus niger FDAARGOS_311)
ATGGCCACTCCAGCAGCTCCCTCACTCGCCCCTGCGCCCGGTCCAGCTCC
GTTGGCACCCGCATTGGCCGCCAAGCCAGCCATCTCACCGTCTCCCGGTC
CGGGCACACCCGGTTCCGTCACCTCCAAGGAATGGGTGATTCCCCCTCGT
CCCAAGCCCGGCCGCAAGCCCGCCACAGACACGCCCCCTACCAAACGCAA
AGCGCAGAATCGAGCTGCCCAGAGAGCTTTCCGCGAGCGTAGAGCAGCCC
GCGTCAACGAACTCGAGGACCAGATCAAGAAGATTGAAGACGACCATGAG
ATCCATGTGTTGCAACTCAAGGAGCAGATTTCGAACCTTTCCCATGAGGT
CGAACAATGTCGGAGCGAAATGGCCTGGTGGCGTGACCGTTGCCACGCTT
TGGAAAAAGAGGTCTCCGTCGAGCGCAGCGCTAAAGAAAGCCTCGTGAAG
GAGTTCCGCTCCTCGTTGTCCGACAAGAATGCCTCTCGCTCCGACAAGGC
ACCCTTGACACGCATACCCAGAGACTCATCTGCAGCTCATGCGGCAGTTG
AGAACAACATGCACGAGGAGCGGGAGGAGGTGCCCCTGGGCTGTAGTAAC
TGCTCGAACGTGCACTGTCAGTGCATTGAAGACGCCTTTAGTGGCATGCC
CGGCATCGAACGGACTTCAGCCCAGTCAAAGCGTCCTGATAACTCGAGCC
AGTCTCATGCCGAACCTGAAATCAAGCCCGAGCCAGAGGAGATGGAGATC
GATTTCACAACGCGATTCGCGGCCCCTCATCACGTCCAGGACGACACTGT
CACTAACGTTTCCTCCCCCGCCGTCGATCCTTGTGGTTTCTGCCAGGATG
GCACGCCATGCATTTGTGCTGAAATGGCTGCCCAGGAAGAGGAGCGCCGG
CGGCGCAACTCGTTCGAGAACAACCGCCTGGCACCCATCCAGAACCTGTC
GCAGTTCACGCCGCCCCCTTCCGACGGCGATGTGCGGTCCGAGGTGACCC
TCCCCCCCATTAGCCAAGCGACAAATCCCTGCGCCAATGGCCCGGGTACT
TGTGCCCAATGTCTCGCCGATCCCAGGCGGACCCTTTTTTGCAAGACGCT
GGCGGCCTCCCGCCCCGCCAGCGCTGCTCCCTCCGGATGTTGCGGCGGTA
AAGGCGCTGATGGTGGATGCTGCATGTCACGCAACTCCAACCCTCAACGC
AGCGGGTCGACTCAACAACAATCACAGACTTCCAGCTCGCGCCGCTCGGC
GACTCCATCCCTGACTCTCTCCTGTGCCGACGCCTTCACTACCCTCTCCC
GCCACCCGAACTTCTCTCGAGCTAGCGATGATATCTCTTCCTGGCTTCCC
AAACTTCACACTCTGCCTAATCCTAGTCAGAGCCAAAAGGAGGTTATGCA
ACCAGGCTCCCGAGCCGCATTGGAAGTCGAAGCCGCCAGTGTCATGGGTG
TGCTACGCTACTTTGATCGGAGATTCGCCGACAAGTGA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1432471..1433958+

>CAN33_18495-T1 ID=CAN33_18495-T1|Name=CAN33_18495-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1488bp|location=Sequence derived from alignment at NKJJ01000011.1:1432471..1433958+ (Aspergillus niger FDAARGOS_311)
ATGGCCACTCCAGCAGCTCCCTCACTCGCCCCTGCGCCCGGTCCAGCTCC
GTTGGCACCCGCATTGGCCGCCAAGCCAGCCATCTCACCGTCTCCCGGTC
CGGGCACACCCGGTTCCGTCACCTCCAAGGAATGGGTGATTCCCCCTCGT
CCCAAGCCCGGCCGCAAGCCCGCCACAGACACGCCCCCTACCAAACGCAA
AGCGCAGAATCGAGCTGCCCAGAGAGCTTTCCGCGAGCGTAGAGCAGCCC
GCGTCAACGAACTCGAGGACCAGATCAAGAAGATTGAAGACGACCATGAG
ATCCATGTGTTGCAACTCAAGGAGCAGATTTCGAACCTTTCCCATGAGGT
CGAACAATGTCGGAGCGAAATGGCCTGGTGGCGTGACCGTTGCCACGCTT
TGGAAAAAGAGGTCTCCGTCGAGCGCAGCGCTAAAGAAAGCCTCGTGAAG
GAGTTCCGCTCCTCGTTGTCCGACAAGAATGCCTCTCGCTCCGACAAGGC
ACCCTTGACACGCATACCCAGAGACTCATCTGCAGCTCATGCGGCAGTTG
AGAACAACATGCACGAGGAGCGGGAGGAGGTGCCCCTGGGCTGTAGTAAC
TGCTCGAACGTGCACTGTCAGTGCATTGAAGACGCCTTTAGTGGCATGCC
CGGCATCGAACGGACTTCAGCCCAGTCAAAGCGTCCTGATAACTCGAGCC
AGTCTCATGCCGAACCTGAAATCAAGCCCGAGCCAGAGGAGATGGAGATC
GATTTCACAACGCGATTCGCGGCCCCTCATCACGTCCAGGACGACACTGT
CACTAACGTTTCCTCCCCCGCCGTCGATCCTTGTGGTTTCTGCCAGGATG
GCACGCCATGCATTTGTGCTGAAATGGCTGCCCAGGAAGAGGAGCGCCGG
CGGCGCAACTCGTTCGAGAACAACCGCCTGGCACCCATCCAGAACCTGTC
GCAGTTCACGCCGCCCCCTTCCGACGGCGATGTGCGGTCCGAGGTGACCC
TCCCCCCCATTAGCCAAGCGACAAATCCCTGCGCCAATGGCCCGGGTACT
TGTGCCCAATGTCTCGCCGATCCCAGGCGGACCCTTTTTTGCAAGACGCT
GGCGGCCTCCCGCCCCGCCAGCGCTGCTCCCTCCGGATGTTGCGGCGGTA
AAGGCGCTGATGGTGGATGCTGCATGTCACGCAACTCCAACCCTCAACGC
AGCGGGTCGACTCAACAACAATCACAGACTTCCAGCTCGCGCCGCTCGGC
GACTCCATCCCTGACTCTCTCCTGTGCCGACGCCTTCACTACCCTCTCCC
GCCACCCGAACTTCTCTCGAGCTAGCGATGATATCTCTTCCTGGCTTCCC
AAACTTCACACTCTGCCTAATCCTAGTCAGAGCCAAAAGGAGGTTATGCA
ACCAGGCTCCCGAGCCGCATTGGAAGTCGAAGCCGCCAGTGTCATGGGTG
TGCTACGCTACTTTGATCGGAGATTCGCCGACAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_18495CAN33_18495Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18495-T1.exon1CAN33_18495-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18495-T1.cdsCAN33_18495-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18495-T1CAN33_18495-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018287
DBxrefInterPro:IPR004827
DBxrefPFAM:PF10297
DBxrefPFAM:PF00170
ProductMinimal binding motif of Hap4 for binding to Hap2/3/5 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1432471..1433958 +
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