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CAN33_18505-T1, CAN33_18505-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18505-T1
Unique NameCAN33_18505-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1436862..1437602+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18505-T1 ID=CAN33_18505-T1|Name=CAN33_18505-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=741bp|location=Sequence derived from alignment at NKJJ01000011.1:1436862..1437602+ (Aspergillus niger FDAARGOS_311)
ATGTCGTTCTGGAAAGAAGCGTGCTTGAACCTGCGTCATGCCGTCCCCAA
GTCCGGGAACAGCATCGGTCGCGCCCAATCCAAGAGATTCCTCACTTCTT
ACTCGACTCAGACGCCGCGAGTGATTGCCTCAAGTCGACTCCCCATCAAT
GCCCGGAGGGACTTCCTGAACCAACAGTCATGGATGGCTCGTCGCAGCTT
TTCCGTCACGGCCTGTGCTCAGCACGGCCATATCACGCCGCCAAAGCCCG
GGGAGGAGTGAGTCATTGCGGACGCTGGCTTCGTATACTACCCATGTTGA
TTTTTGATGCGCAGGATCAACGTGACTTTCATCGACAAGGACGGCGTGAA
GATTGAACTGCAGGTCTCCGAGGGTGACAACCTGCTAGACATCGCACAGG
CAAATGACATCGAGATGGAAGGTGCGTAATGCCAGTTATCGGGAGATACG
CGGAATGCTAGGGCTACCGTGACTAACGGACGCTGGAATACTTTAGGTGC
CTGTGGTGGTTCTTGCGCCTGCTCGACTTGCCATGTGATCGTCGAGGACC
CGGACATGTTCGACAAGATGGAAGAGCCGTCGGACGACGAGAACGACATG
CTGGATCTGGCGTTCGGTCTGACAGAGACCTCCCGGTTGGGTTGTCAAGT
GGCCATGAGCAAGGACCTCGATGGCCTCGTGGTCCGGCTGCCGTCGATGA
CTCGGAACTTGCAGGCAAGCGACTTCGAGCCCAAGAAATGA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1436862..1437602+

>CAN33_18505-T1 ID=CAN33_18505-T1|Name=CAN33_18505-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1827bp|location=Sequence derived from alignment at NKJJ01000011.1:1436862..1437602+ (Aspergillus niger FDAARGOS_311)
ATGTCGTTCTGGAAAGAAGCGTGCTTGAACCTGCGTCATGCCGTCCCCAA
GTCCGGGAACAGCATCGGTCGCGCCCAATCCAAGAGATTCCTCACTTCTT
ACTCGACTCAGACGCCGCGAGTGATTGCCTCAAGTCGACTCCCCATCAAT
GCCCGGAGGGACTTCCTGAACCAACAGTCATGGATGGCTCGTCGCAGCTT
TTCCGTCACGGCCTGTGCTCAGCACGGCCATATCACGCCGCCAAAGCCCG
GGGAGGAGATCAACGTGACTTTCATCGACAAGGACGGCGTGAAGATTGAA
CTGCAGGTCTCCGAGGGTGACAACCTGCTAGACATCGCACAGGCAAATGA
CATCGAGATGGAAGGTGCCTGTGGTGGTTCTTGCGCCTGCTCGACTTGCC
ATGTGATCGTCGAGGACCCGGACATGTTCGACAAGATGGAAGAGCCGTCG
GACGACGAGAACGACATGCTGGATCTGGCGTTCGGTCTGACAGAGACCTC
CCGGTTGGGTTGTCAAGTGGCCATGAGCAAGGACCTCGATGGCCTCGTGG
TCCGGCTGCCGTCGATGACTCGGAACTTGCAGGCAAGCGACTTCGAGCCC
AAGAAATGAATGTCGTTCTGGAAAGAAGCGTGCTTGAACCTGCGTCATGC
CGTCCCCAAGTCCGGGAACAGCATCGGTCGCGCCCAATCCAAGAGATTCC
TCACTTCTTACTCGACTCAGACGCCGCGAGTGATTGCCTCAAGTCGACTC
CCCATCAATGCCCGGAGGGACTTCCTGAACCAACAGTCATGGATGGCTCG
TCGCAGCTTTTCCGTCACGGCCTGTGCTCAGCACGGCCATATCACGCCGC
CAAAGCCCGGGGAGGAGATCAACGTGACTTTCATCGACAAGGACGGCGTG
AAGATTGAACTGCAGGTCTCCGAGGGTGACAACCTGCTAGACATCGCACA
GGCAAATGACATCGAGATGGAAGGTGCCTGTGGTGGTTCTTGCGCCTGCT
CGACTTGCCATGTGATCGTCGAGGACCCGGACATGTTCGACAAGATGGAA
GAGCCGTCGGACGACGAGAACGACATGCTGGATCTGGCGTTCGGTCTGAC
AGAGACCTCCCGGTTGGGTTGTCAAGTGGCCATGAGCAAGGACCTCGATG
GCCTCGTGGTCCGGCTGCCGTCGATGACTCGGAACTTGCAGGCAAGCGAC
TTCGAGCCCAAGAAATGAATGTCGTTCTGGAAAGAAGCGTGCTTGAACCT
GCGTCATGCCGTCCCCAAGTCCGGGAACAGCATCGGTCGCGCCCAATCCA
AGAGATTCCTCACTTCTTACTCGACTCAGACGCCGCGAGTGATTGCCTCA
AGTCGACTCCCCATCAATGCCCGGAGGGACTTCCTGAACCAACAGTCATG
GATGGCTCGTCGCAGCTTTTCCGTCACGGCCTGTGCTCAGCACGGCCATA
TCACGCCGCCAAAGCCCGGGGAGGAGATCAACGTGACTTTCATCGACAAG
GACGGCGTGAAGATTGAACTGCAGGTCTCCGAGGGTGACAACCTGCTAGA
CATCGCACAGGCAAATGACATCGAGATGGAAGGTGCCTGTGGTGGTTCTT
GCGCCTGCTCGACTTGCCATGTGATCGTCGAGGACCCGGACATGTTCGAC
AAGATGGAAGAGCCGTCGGACGACGAGAACGACATGCTGGATCTGGCGTT
CGGTCTGACAGAGACCTCCCGGTTGGGTTGTCAAGTGGCCATGAGCAAGG
ACCTCGATGGCCTCGTGGTCCGGCTGCCGTCGATGACTCGGAACTTGCAG
GCAAGCGACTTCGAGCCCAAGAAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
GO:0009055electron transfer activity
GO:00515372 iron, 2 sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YAH1CAN33_18505Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18505-T1.exon1CAN33_18505-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_18505-T1.exon2CAN33_18505-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_18505-T1.exon3CAN33_18505-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18505-T1.cdsCAN33_18505-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18505-T1CAN33_18505-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036010
DBxrefInterPro:IPR018298
DBxrefInterPro:IPR012675
DBxrefInterPro:IPR001041
DBxrefInterPro:IPR001055
DBxrefPFAM:PF00111
Productmitochondrial matrix iron-sulfur protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1436862..1437602 +
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