|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:1437922..1438800- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_18510-T1 ID=CAN33_18510-T1|Name=CAN33_18510-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=879bp|location=Sequence derived from alignment at NKJJ01000011.1:1437922..1438800- (Aspergillus niger FDAARGOS_311)
ATGCCTCCCCACATGAAAAAGCGCAAGGTTCTCGAGTCGTTGCAGGCCGG
CCCTAAGAAGAAGTTCAGAAAGCAGCGCGAATACCACAGCAGCTCCGAAG
AAGAGTCCGAAGCCGATGAACCTACCGATTTCAAGGCTGTCAGCTTGGCA
GACTCTGACGCTGAAGATGAAGTCCAAGTGAAGAAGCCCAAGAAGCAGAC
CAAGGCGATCGGCGCCTCTACGAAGAGAAAAGCGGAGGAGAAAGACGAAA
GCTCCGACGAGGAGGTAGCCGACGATGACGAGGACGACGAGGAGGATGGT
GATGTTGAGTCTGAAATCGACTCTGAAGGATCCGACGATGAAGAAGGTGC
CGACTCCGATACTTCTGCACCTGCGACAACGGGTCGCAGAGCTGTCTCTA
AGCGCAATGATCCCTCGGCCTTCTCTACCTCTATCGCAAAAATTCTGTCC
ACCAAACTCCCCACATCCGTTCGAGACGATCCCGTGCTGGCGCGCAGCAA
AGCCGCTGCCCAGAAGAGCACCGACGTTGCAGAGGAGAAGCTGGATCGGC
AAGCGCGGGCCAAGCTTCGTGCGGAGAAGAAGGAAGAGCTGGACCGTGGT
CGTATTCGCGATGTCATGGGTCTTCAGCGTGGTCAGGCGGGTGCGGTTGC
GGAGGAGGAGAAGCGTCTGCGCAAGATTGCCCAGCGTGGTGTGGTGAAGC
TGTTCAATGCCGTCCGCGCCGCCCAGGTGCGCGGAGAGGAAGCAGCCAAG
GCAGAGCGCAAGAAGGGTACCGTTGGTATTGACGAGCGCGAGAAGGCCGT
GAACGAAGTCAGCAAGCAGGGATTCTTGGACTTGATTAGCGGGAAGAAGG
GCAAGGCGTTGAAGATTGAGGAGGCTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:1437922..1438800- >CAN33_18510-T1 ID=CAN33_18510-T1|Name=CAN33_18510-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1494bp|location=Sequence derived from alignment at NKJJ01000011.1:1437922..1438800- (Aspergillus niger FDAARGOS_311)
TCTGAAATCGACTCTGAAGGATCCGACGATGAAGAAGGTGCCGACTCCGA
TACTTCTGCACCTGCGACAACGGGTCGCAGAGCTGTCTCTAAGCGCAATG
ATCCCTCGGCCTTCTCTACCTCTATCGCAAAAATTCTGTCCACCAAACTC
CCCACATCCGTTCGAGACGATCCCGTGCTGGCGCGCAGCAAAGCCGCTGC
CCAGAAGAGCACCGACGTTGCAGAGGAGAAGCTGGATCGGCAAGCGCGGG
CCAAGCTTCGTGCGGAGAAGAAGGAAGAGCTGGACCGTGGTCGTATTCGC
GATGTCATGGGTCTTCAGCGTGGTCAGGCGGGTGCGGTTGCGGAGGAGGA
GAAGCGTCTGCGCAAGATTGCCCAGCGTGGTGTGGTGAAGCTGTTCAATG
CCGTCCGCGCCGCCCAGGTGCGCGGAGAGGAAGCAGCCAAGGCAGAGCGC
AAGAAGGGTACCGTTGGTATTGACGAGCGCGAGAAGGCCGTGAACGAAGT
CAGCAAGCAGGGATTCTTGGACTTGATTAGCGGGAAGAAGGGCAAGGCGT
TGAAGATTGAGGAGGCTTAAATGCCTCCCCACATGAAAAAGCGCAAGGTT
CTCGAGTCGTTGCAGGCCGGCCCTAAGAAGAAGTTCAGAAAGCAGCGCGA
ATACCACAGCAGCTCCGAAGAAGAGTCCGAAGCCGATGAACCTACCGATT
TCAAGGCTGTCAGCTTGGCAGACTCTGACGCTGAAGATGAAGTCCAATCT
GAAATCGACTCTGAAGGATCCGACGATGAAGAAGGTGCCGACTCCGATAC
TTCTGCACCTGCGACAACGGGTCGCAGAGCTGTCTCTAAGCGCAATGATC
CCTCGGCCTTCTCTACCTCTATCGCAAAAATTCTGTCCACCAAACTCCCC
ACATCCGTTCGAGACGATCCCGTGCTGGCGCGCAGCAAAGCCGCTGCCCA
GAAGAGCACCGACGTTGCAGAGGAGAAGCTGGATCGGCAAGCGCGGGCCA
AGCTTCGTGCGGAGAAGAAGGAAGAGCTGGACCGTGGTCGTATTCGCGAT
GTCATGGGTCTTCAGCGTGGTCAGGCGGGTGCGGTTGCGGAGGAGGAGAA
GCGTCTGCGCAAGATTGCCCAGCGTGGTGTGGTGAAGCTGTTCAATGCCG
TCCGCGCCGCCCAGGTGCGCGGAGAGGAAGCAGCCAAGGCAGAGCGCAAG
AAGGGTACCGTTGGTATTGACGAGCGCGAGAAGGCCGTGAACGAAGTCAG
CAAGCAGGGATTCTTGGACTTGATTAGCGGGAAGAAGGGCAAGGCGTTGA
AGATTGAGGAGGCTTAAATGCCTCCCCACATGAAAAAGCGCAAGGTTCTC
GAGTCGTTGCAGGCCGGCCCTAAGAAGAAGTTCAGAAAGCAGCGCGAATA
CCACAGCAGCTCCGAAGAAGAGTCCGAAGCCGATGAACCTACCGATTTCA
AGGCTGTCAGCTTGGCAGACTCTGACGCTGAAGATGAAGTCCAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006364 | rRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092653LT |
| DBxref | InterPro:IPR012459 |
| DBxref | PFAM:PF07890 |
| Product | Rrp15p family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:1437922..1438800 - |
|
