|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:1493207..1494362+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_18600-T1 ID=CAN33_18600-T1|Name=CAN33_18600-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1156bp|location=Sequence derived from alignment at NKJJ01000011.1:1493207..1494362+ (Aspergillus niger FDAARGOS_311)
ATGAACGCCGCCTCCCTCGGCGACACCGCCCTCCAACAGTCCGACCCCCA
CACCGCAACAATCCACTACACGACCGCCCTCCTCACGCACCCCCGCTCGC
CCAGCTACTTCATCAAACGCTCAACAGCCTTCTCACGCCTAAAGCCCACA
CCGAACCTCTCCGCCGCCCTCCGCGATGCCGAATCCGCCGTTCTTCTCGC
CCGCGAGCGGGGGAAACGCGAGCTGATCGTCGAGGCGCAGATGCGGAGAG
CCATCGTTTTGTTTCTCATGGGGAGATACGTTGCTGCGGAGGGGGTGGTA
GGCGTGGTGGAGGGTATGATTGGATTGGATAAGGACGGTAATGGTGGGGA
AGATAAGGAGGAGAAGGTGAGGAAGGCGATGGGGGTGGTGCTGGGAAGGG
TATTGAGGCGGAGGTGAGGATTTGGGGGGCGAAGATTAGGGCGAAGGTCA
ACGGTTTGGGCGAGCAGAGTGGTGAGCGTGGGGAGAAGGTGGAGGAGGTT
CCGGTGGGGGTTAAAGTGCCGGGGGAGAAGGAGTTGAGGGGACAGTTGGA
GGAGTTGAGGGGAGGGAAGGTTGGTGAGGGTATTGGTGGTGAAGAGAAGC
AGAGTCAGAAGGTTGAGGATAAGGTGGAGGAGAAGGGGAGAGCTGAGGTC
AAGGAGACTCAGCAGCAGCAACAACAGCAGCAGCAGCAGGTCAAGGTCCG
TCATGAATGGTACCAGTCCGGTGAGACGGTTGTTGTGACGCTTTACGTGA
AAGGCGTGCCCAAGGATAAAGTGGCTATTGAGCTGAAAGAGGACTCGGTA
TGTATTCACTCCCCTTGACTCAAACATGCAAGTCACTAACCTATATACAT
AGACATCCATCCAATTCCCCCTCCCCTCCGGCGCCGAATACGACTTCACT
CTCGACCCGCTCTTCGCTCCCATCGACCCCTCCACCTCTAAAGTCTCCGT
CTTCTCCACAAAGATCGAAATCTCCCTGCGCAAGAAAACTCCCGGCCAGA
AATGGAGCGCCCTGGAATCTACCACCGGACCTGTCATCTCTACTCCCCAG
CCCACGGTTACACCCACCACTACCACCACACAAGCCCAAGCCCCATCATA
CCCCACCTCCTCCCGCCACGGCGCCAAAGACTGGGACAAGCTCGCCTCCA
GCCTAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:1493207..1494362+ >CAN33_18600-T1 ID=CAN33_18600-T1|Name=CAN33_18600-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2880bp|location=Sequence derived from alignment at NKJJ01000011.1:1493207..1494362+ (Aspergillus niger FDAARGOS_311)
ATGAACGCCGCCTCCCTCGGCGACACCGCCCTCCAACAGTCCGACCCCCA
CACCGCAACAATCCACTACACGACCGCCCTCCTCACGCACCCCCGCTCGC
CCAGCTACTTCATCAAACGCTCAACAGCCTTCTCACGCCTAAAGCCCACA
CCGAACCTCTCCGCCGCCCTCCGCGATGCCGAATCCGCCGTTCTTCTCGC
CCGCGAGCGGGGGAAACGCGAGCTGATCGTCGAGGCGCAGATGCGGAGAG
CCATCGTTTTGTTTCTCATGGGGAGATACGTTGCTGCGGAGGGGGTGGTA
GGCGTGGTGGAGGGTATGATTGGATTGGATAAGGACGGTAATGGTGGGGA
AGATAAGGAGGAGAAGGTCCGTCATGAATGGTACCAGTCCGGTGAGACGG
TTGTTGTGACGCTTTACGTGAAAGGCGTGCCCAAGGATAAAGTGGCTATT
GAGCTGAAAGAGGACTCGACATCCATCCAATTCCCCCTCCCCTCCGGCGC
CGAATACGACTTCACTCTCGACCCGCTCTTCGCTCCCATCGACCCCTCCA
CCTCTAAAGTCTCCGTCTTCTCCACAAAGATCGAAATCTCCCTGCGCAAG
AAAACTCCCGGCCAGAAATGGAGCGCCCTGGAATCTACCACCGGACCTCC
CAAGCCCCATCATACCCCACCTCCTCCCGCCACGGCGCCAAAGACTGGGA
CAAGCTCGCCTCCAGCCTAAATGAACGCCGCCTCCCTCGGCGACACCGCC
CTCCAACAGTCCGACCCCCACACCGCAACAATCCACTACACGACCGCCCT
CCTCACGCACCCCCGCTCGCCCAGCTACTTCATCAAACGCTCAACAGCCT
TCTCACGCCTAAAGCCCACACCGAACCTCTCCGCCGCCCTCCGCGATGCC
GAATCCGCCGTTCTTCTCGCCCGCGAGCGGGGGAAACGCGAGCTGATCGT
CGAGGCGCAGATGCGGAGAGCCATCGTTTTGTTTCTCATGGGGAGATACG
TTGCTGCGGAGGGGGTGGTAGGCGTGGTGGAGGGTATGATTGGATTGGAT
AAGGACGGTAATGGTGGGGAAGATAAGGAGGAGAAGGTCCGTCATGAATG
GTACCAGTCCGGTGAGACGGTTGTTGTGACGCTTTACGTGAAAGGCGTGC
CCAAGGATAAAGTGGCTATTGAGCTGAAAGAGGACTCGACATCCATCCAA
TTCCCCCTCCCCTCCGGCGCCGAATACGACTTCACTCTCGACCCGCTCTT
CGCTCCCATCGACCCCTCCACCTCTAAAGTCTCCGTCTTCTCCACAAAGA
TCGAAATCTCCCTGCGCAAGAAAACTCCCGGCCAGAAATGGAGCGCCCTG
GAATCTACCACCGGACCTCCCAAGCCCCATCATACCCCACCTCCTCCCGC
CACGGCGCCAAAGACTGGGACAAGCTCGCCTCCAGCCTAAATGAACGCCG
CCTCCCTCGGCGACACCGCCCTCCAACAGTCCGACCCCCACACCGCAACA
ATCCACTACACGACCGCCCTCCTCACGCACCCCCGCTCGCCCAGCTACTT
CATCAAACGCTCAACAGCCTTCTCACGCCTAAAGCCCACACCGAACCTCT
CCGCCGCCCTCCGCGATGCCGAATCCGCCGTTCTTCTCGCCCGCGAGCGG
GGGAAACGCGAGCTGATCGTCGAGGCGCAGATGCGGAGAGCCATCGTTTT
GTTTCTCATGGGGAGATACGTTGCTGCGGAGGGGGTGGTAGGCGTGGTGG
AGGGTATGATTGGATTGGATAAGGACGGTAATGGTGGGGAAGATAAGGAG
GAGAAGGTCCGTCATGAATGGTACCAGTCCGGTGAGACGGTTGTTGTGAC
GCTTTACGTGAAAGGCGTGCCCAAGGATAAAGTGGCTATTGAGCTGAAAG
AGGACTCGACATCCATCCAATTCCCCCTCCCCTCCGGCGCCGAATACGAC
TTCACTCTCGACCCGCTCTTCGCTCCCATCGACCCCTCCACCTCTAAAGT
CTCCGTCTTCTCCACAAAGATCGAAATCTCCCTGCGCAAGAAAACTCCCG
GCCAGAAATGGAGCGCCCTGGAATCTACCACCGGACCTCCCAAGCCCCAT
CATACCCCACCTCCTCCCGCCACGGCGCCAAAGACTGGGACAAGCTCGCC
TCCAGCCTAAATGAACGCCGCCTCCCTCGGCGACACCGCCCTCCAACAGT
CCGACCCCCACACCGCAACAATCCACTACACGACCGCCCTCCTCACGCAC
CCCCGCTCGCCCAGCTACTTCATCAAACGCTCAACAGCCTTCTCACGCCT
AAAGCCCACACCGAACCTCTCCGCCGCCCTCCGCGATGCCGAATCCGCCG
TTCTTCTCGCCCGCGAGCGGGGGAAACGCGAGCTGATCGTCGAGGCGCAG
ATGCGGAGAGCCATCGTTTTGTTTCTCATGGGGAGATACGTTGCTGCGGA
GGGGGTGGTAGGCGTGGTGGAGGGTATGATTGGATTGGATAAGGACGGTA
ATGGTGGGGAAGATAAGGAGGAGAAGGTCCGTCATGAATGGTACCAGTCC
GGTGAGACGGTTGTTGTGACGCTTTACGTGAAAGGCGTGCCCAAGGATAA
AGTGGCTATTGAGCTGAAAGAGGACTCGACATCCATCCAATTCCCCCTCC
CCTCCGGCGCCGAATACGACTTCACTCTCGACCCGCTCTTCGCTCCCATC
GACCCCTCCACCTCTAAAGTCTCCGTCTTCTCCACAAAGATCGAAATCTC
CCTGCGCAAGAAAACTCCCGGCCAGAAATGGAGCGCCCTGGAATCTACCA
CCGGACCTCCCAAGCCCCATCATACCCCACCTCCTCCCGCCACGGCGCCA
AAGACTGGGACAAGCTCGCCTCCAGCCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000111.10 |
| DBxref | InterPro:IPR007052 |
| DBxref | InterPro:IPR008978 |
| DBxref | InterPro:IPR011990 |
| DBxref | PFAM:PF04969 |
| Product | CS domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:1493207..1494362 + |
|
