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CAN33_18665-T1, CAN33_18665-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18665-T1
Unique NameCAN33_18665-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1531624..1532990-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18665-T1 ID=CAN33_18665-T1|Name=CAN33_18665-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1367bp|location=Sequence derived from alignment at NKJJ01000011.1:1531624..1532990- (Aspergillus niger FDAARGOS_311)
ATGTCTACCGCTACTGCCGCGACGGCCGCCACTGGCCAGAACAAGCTCGA
AAAGAAGCCCGTGAAGTTCAGCAACCTGCTACGTATGTAATCTCTGCTGC
AACCCCCGGACGGTTAGCTTTTGAGGGAAACTGGTTCTGATGGCATATGT
TACAGTGGGTGCTGGATTGAACCTCTTCGAGTATGTTTTCCCTTCTCACC
TGCTCCCAATCTATGCACCGTGCGTTTCCCTAACTAACATGGAATAGGGT
CACCACTTTGGGTCAGGTACGAAGCAATAACCGAGGCGGCAATTGTCGGC
TTATGCTAACTCAGTTCCTATAGCCGCTGGAAGTGATCAAGACGACCATG
GCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTCGAATTTGGGG
CCGTGGCGGGATCCTCGGTTGTAAGTGCTCCTTCCGCCTTGTTCGCTTTT
TCCGACTAGTGTGGGGTGGCATTGTCTGACACTAGTCACCTACTTTAGAT
TATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTCCACTAAGGGCGC
CGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTGCCAAGGTGCTTG
GTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATGGTCGGTGGTATT
GCACAGGCATACGCGACCATGGGCTTCTGTACCTGCATGAAGACAGTCGA
GATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGCCCCCCAGCACCT
TCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATTCGTGGTATCAAC
CGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAACTGGGGATCCCG
CTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCAGGGTCACCAACA
AGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATCCTGGCTTCCGGT
CTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGAGGTGATCCGTGT
CGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCAAGAACCTTACCG
TGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGCATCAAGGGATTG
TACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTGGCAGACCGTCTG
CATGGTGGCACTTGGTGACATGTAAGTGGAACAAACTTTCCCCTCTCTTG
CATTATCAATACCCCGGGCGGAGCACTTCCTATGGGGGTGGCGCCCCGAT
CTTCATGTGATAACCGAGGAGTGAACTGGAGCTAACGTGTGGGTCTCCGT
TACCCCGAACAGGGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAG
TCACCGCTAAGCACTAG
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1531624..1532990-

>CAN33_18665-T1 ID=CAN33_18665-T1|Name=CAN33_18665-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5706bp|location=Sequence derived from alignment at NKJJ01000011.1:1531624..1532990- (Aspergillus niger FDAARGOS_311)
GGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGCTAAGC
ACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTCCACTA
AGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTGCCAAG
GTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATGGTCGG
TGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCATGAAGA
CAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGCCCCCC
AGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATTCGTGG
TATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAACTGGG
GATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCAGGGTC
ACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATCCTGGC
TTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGAGGTGA
TCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCAAGAAC
CTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGCATCAA
GGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTGGCAGA
CCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAAGACGA
CCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTCGAATT
TGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGTGGGTG
CTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGCCGCCA
CTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACCTGCTA
CGGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGCTAAG
CACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTCCACT
AAGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTGCCAA
GGTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATGGTCG
GTGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCATGAAG
ACAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGCCCCC
CAGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATTCGTG
GTATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAACTGG
GGATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCAGGGT
CACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATCCTGG
CTTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGAGGTG
ATCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCAAGAA
CCTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGCATCA
AGGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTGGCAG
ACCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAAGACG
ACCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTCGAAT
TTGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGTGGGT
GCTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGCCGCC
ACTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACCTGCT
ACGGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGCTAA
GCACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTCCAC
TAAGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTGCCA
AGGTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATGGTC
GGTGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCATGAA
GACAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGCCCC
CCAGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATTCGT
GGTATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAACTG
GGGATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCAGGG
TCACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATCCTG
GCTTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGAGGT
GATCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCAAGA
ACCTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGCATC
AAGGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTGGCA
GACCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAAGAC
GACCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTCGAA
TTTGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGTGGG
TGCTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGCCGC
CACTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACCTGC
TACGGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGCTA
AGCACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTCCA
CTAAGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTGCC
AAGGTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATGGT
CGGTGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCATGA
AGACAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGCCC
CCCAGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATTCG
TGGTATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAACT
GGGGATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCAGG
GTCACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATCCT
GGCTTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGAGG
TGATCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCAAG
AACCTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGCAT
CAAGGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTGGC
AGACCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAAGA
CGACCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTCGA
ATTTGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGTGG
GTGCTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGCCG
CCACTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACCTG
CTACGGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGCT
AAGCACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTCC
ACTAAGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTGC
CAAGGTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATGG
TCGGTGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCATG
AAGACAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGCC
CCCCAGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATTC
GTGGTATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAAC
TGGGGATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCAG
GGTCACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATCC
TGGCTTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGAG
GTGATCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCAA
GAACCTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGCA
TCAAGGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTGG
CAGACCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAAG
ACGACCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTCG
AATTTGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGTG
GGTGCTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGCC
GCCACTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACCT
GCTACGGCCAAGGAAGCAGTCGAAAAACTGACGGGCGACAAAGTCACCGC
TAAGCACTAGATTATCAAGGTCTCATTCCGTGGGCCTGGATTGAGGCCTC
CACTAAGGGCGCCGTCCTCCTCTTCGTCGCATCGGAGGCGGAATTCCGTG
CCAAGGTGCTTGGTGCGCCCGACTTCGCCGCCGGTATCGCTGGAGGTATG
GTCGGTGGTATTGCACAGGCATACGCGACCATGGGCTTCTGTACCTGCAT
GAAGACAGTCGAGATCACCAAGCATAAGATGGCCGCCCAGGGCGTCAAGC
CCCCCAGCACCTTCGCGACTTTCATGGATATCTACCGCAAGGAGGGCATT
CGTGGTATCAACCGTGGTGTCAACGCCGTTGCCATTCGCCAGACCACCAA
CTGGGGATCCCGCTTCGGTTTCTCTCGCCTGGCTGAAACCGCTATTCGCA
GGGTCACCAACAAGGAGGAGGGTCAGAAGCTCAATGCATTTGAGAAGATC
CTGGCTTCCGGTCTCGGTGGTGGTCTCTCTGCCTGGAACCAGCCCATTGA
GGTGATCCGTGTCGAGATGCAGAGCAAGACTGATGACCCCAACCGCCCCA
AGAACCTTACCGTGGGCAAGGCCGCCAAGTACATCTACGACAACAACGGC
ATCAAGGGATTGTACCGGGGTGTGGCTCCCCGTGTGGGTCTGGGAATCTG
GCAGACCGTCTGCATGGTGGCACTTGGTGACATCCGCTGGAAGTGATCAA
GACGACCATGGCTGCAAACCGGGGCGATAGCTTCGCTGGTGCTATGGGTC
GAATTTGGGGCCGTGGCGGGATCCTCGGTTGGTCACCACTTTGGGTCAGT
GGGTGCTGGATTGAACCTCTTCGAATGTCTACCGCTACTGCCGCGACGGC
CGCCACTGGCCAGAACAAGCTCGAAAAGAAGCCCGTGAAGTTCAGCAACC
TGCTAC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YHM2CAN33_18665Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18665-T1CAN33_18665-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18665-T1.cdsCAN33_18665-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18665-T1.exon6CAN33_18665-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_18665-T1.exon5CAN33_18665-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_18665-T1.exon4CAN33_18665-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_18665-T1.exon3CAN33_18665-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_18665-T1.exon2CAN33_18665-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_18665-T1.exon1CAN33_18665-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09263HD8
DBxrefInterPro:IPR018108
DBxrefInterPro:IPR023395
DBxrefPFAM:PF00153
ProductMitochondrial DNA replication protein yhm2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1531624..1532990 -
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