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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:1572191..1572889+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_18730-T1 ID=CAN33_18730-T1|Name=CAN33_18730-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=699bp|location=Sequence derived from alignment at NKJJ01000011.1:1572191..1572889+ (Aspergillus niger FDAARGOS_311)
ATGGTCGATTCCGATGAAGAGTACATAGGAGAAATCTCTGAGGATGAGGA
TGAAAACAATCTTCTACCAGGGTCTCGCGGAGAGACTACGTCCGCATCCC
GCTCCAAGAGGAGAAAGCACCGTGGAGGCGCAGAATGGGAGGTCTCGAGA
ACATGGGAAACCTTAGTTGAAGGTGCCGACGGTACAATCAGCTCTACAGT
TGAAGGGCTTCTCGAGGCTGGGAAAAGGAAAAGGTAGGGTGTACTTTCAA
GCCGAGTTAGTCTCAGTTTTGATAACGGTTCGAGCTGAGTTCCATGTCTT
CGCGCTTGCAGGCTCCTCAGAGATACGACTCCTTTACAACGGGGTATAAT
CCGTCATCTCATCTTGATTATAGATCTGTCACAATCTATGACCGAGAAAG
ATCTCCGACCGACACGTTACTTATTGTCCTTACGGTATGCACAAGAGTTC
GTGAGGGAATTTTTCGAGCAAAATCCCATCTCTCAACTCGGCGTTCTTGG
CCTCAAAGATGGACTGGCGGTCAGAGTCAGTGATATGAGTGGAAACCCTA
CTGAGCATATTAGTGCCATCCAATCACTGCGAGACCAGGATCCGAAAGGT
CTTCCTAGTCTGCAAAATGGCTTCGAAATGGCTCGTGGTGCCTTGTTGTA
TGTCTTTTCCACGGTAGCGTCGTACACACTCAATGATAAGGTGGACTAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:1572191..1572889+ >CAN33_18730-T1 ID=CAN33_18730-T1|Name=CAN33_18730-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1242bp|location=Sequence derived from alignment at NKJJ01000011.1:1572191..1572889+ (Aspergillus niger FDAARGOS_311)
ATGGTCGATTCCGATGAAGAGTACATAGGAGAAATCTCTGAGGATGAGGA
TGAAAACAATCTTCTACCAGGGTCTCGCGGAGAGACTACGTCCGCATCCC
GCTCCAAGAGGAGAAAGCACCGTGGAGGCGCAGAATGGGAGGTCTCGAGA
ACATGGGAAACCTTAGTTGAAGGTGCCGACGGTACAATCAGCTCTACAGT
TGAAGGGCTTCTCGAGGCTGGGAAAAGGAAAAGGCTCCTCAGAGATACGA
CTCCTTTACAACGGGGTATAATCCGTCATCTCATCTTGATTATAGATCTG
TCACAATCTATGACCGAGAAAGATCTCCGACCGACACGTTACTTATTGTC
CTTACGGTATGCACAAGAGTTCGTGAGGGAATTTTTCGAGCAAAATCCCA
TCTCTCAACTCGGCGTTCTTGGCCTCAAAGATGGACTGGCGGTCAGAGTC
AGTGATATGAGTGGAAACCCTACTGAGCATATTAGTGCCATCCAATCACT
GCGAGACCAGGATCCGAAAGGTCTTCCTAGTCTGCAAAATGGCTTCGAAA
TGGCTCGTGGTGCCTTGTTGTATGTCTTTTCCACGGTAGCGTCGTACACA
CTCAATGATAAGGTGGACTAAATGGTCGATTCCGATGAAGAGTACATAGG
AGAAATCTCTGAGGATGAGGATGAAAACAATCTTCTACCAGGGTCTCGCG
GAGAGACTACGTCCGCATCCCGCTCCAAGAGGAGAAAGCACCGTGGAGGC
GCAGAATGGGAGGTCTCGAGAACATGGGAAACCTTAGTTGAAGGTGCCGA
CGGTACAATCAGCTCTACAGTTGAAGGGCTTCTCGAGGCTGGGAAAAGGA
AAAGGCTCCTCAGAGATACGACTCCTTTACAACGGGGTATAATCCGTCAT
CTCATCTTGATTATAGATCTGTCACAATCTATGACCGAGAAAGATCTCCG
ACCGACACGTTACTTATTGTCCTTACGGTATGCACAAGAGTTCGTGAGGG
AATTTTTCGAGCAAAATCCCATCTCTCAACTCGGCGTTCTTGGCCTCAAA
GATGGACTGGCGGTCAGAGTCAGTGATATGAGTGGAAACCCTACTGAGCA
TATTAGTGCCATCCAATCACTGCGAGACCAGGATCCGAAAGGTCTTCCTA
GTCTGCAAAATGGCTTCGAAATGGCTCGTGGTGCCTTGTTGTATGTCTTT
TCCACGGTAGCGTCGTACACACTCAATGATAAGGTGGACTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036465 |
| DBxref | InterPro:IPR007198 |
| DBxref | PFAM:PF13519 |
| DBxref | PFAM:PF04056 |
| Product | Ssl1-like family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:1572191..1572889 + |
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