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CAN33_18760-T1, CAN33_18760-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18760-T1
Unique NameCAN33_18760-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1600514..1601431-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18760-T1 ID=CAN33_18760-T1|Name=CAN33_18760-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=918bp|location=Sequence derived from alignment at NKJJ01000011.1:1600514..1601431- (Aspergillus niger FDAARGOS_311)
ATGAATATCTTCAGGTTATTAGGTGAGTTGTTTGTTCGCTCTCAGTTCAA
TTGACGCACCATGCTAATTCTTACAAACAAGCCGACTTTTCCCATCTTGC
GTCTATATTCATATTATTGCAGAAGATGAAGTCTTCAAGTGTATGCTGTC
ATTAAAACGGATTCTTAGCATTTTTCTGACTGGATCCAGAGTTGCTCAGG
GCTTTCATTCAAGTCCCAGGCGCTATATTTGATGGTTTTTGTAACGCGTT
ATCTTGGTAAGCTTCAGGGATTCAATACTCGATTGTATAGGTCTAGCTCT
CTGACTGGTTTCTGATCACAGATTTATTCTGGGCTTTCACGGACTCTTTC
TATAATACGACTTTTAAAATCCTGTTCATCGGCTCGTCAGCTTATATCAT
CTACCTCATGCTCAACGACTATAAGCCAACGCATGACCCCAACACTGATA
CCTTTAAAGTGCAGTATCTCCTCGGGTTCAGTGCTTTGTTGGCTCTCCTT
TTCCCGCACGACTATAGCGTCTCAGAGGTAAACCCCCTGGCAGGACATTT
GTCACACCTCATCTGACCTTTCTAGATTCTTTGGACGTTCTCTATATGGC
TCGAGTCCGTGGCTATTTTGCCCCAGCTTTTCATGCTTCAGCGCACTGGG
GAGGCGGACACCATAACAACGCATTATCTTTTCGCTTTGGGATTGTATCG
TGCCCTTTACATCCCCAATTGGATTTATCGCTATTTCGCAGAGAGCCACT
TTCAGCCTATCCCTGTTGTAGCCGGTATCATCCAGACACTCTTATATTCT
GATTTCTTTTATATCTATTACACCAAGTGAGTCCCAGCAAGTTTCCTCTA
TCAGTACCCAGGGGCGCTAACTGTCATACAGGGTTATGAAGGGTAAGAAG
TTCTCATTGCCTGTTTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1600514..1601431-

>CAN33_18760-T1 ID=CAN33_18760-T1|Name=CAN33_18760-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3852bp|location=Sequence derived from alignment at NKJJ01000011.1:1600514..1601431- (Aspergillus niger FDAARGOS_311)
GGTTATGAAGGGTAAGAAGTTCTCATTGCCTGTTTAAATTCTTTGGACGT
TCTCTATATGGCTCGAGTCCGTGGCTATTTTGCCCCAGCTTTTCATGCTT
CAGCGCACTGGGGAGGCGGACACCATAACAACGCATTATCTTTTCGCTTT
GGGATTGTATCGTGCCCTTTACATCCCCAATTGGATTTATCGCTATTTCG
CAGAGAGCCACTTTCAGCCTATCCCTGTTGTAGCCGGTATCATCCAGACA
CTCTTATATTCTGATTTCTTTTATATCTATTACACCAAATTTATTCTGGG
CTTTCACGGACTCTTTCTATAATACGACTTTTAAAATCCTGTTCATCGGC
TCGTCAGCTTATATCATCTACCTCATGCTCAACGACTATAAGCCAACGCA
TGACCCCAACACTGATACCTTTAAAGTGCAGTATCTCCTCGGGTTCAGTG
CTTTGTTGGCTCTCCTTTTCCCGCACGACTATAGCGTCTCAGAGAGTTGC
TCAGGGCTTTCATTCAAGTCCCAGGCGCTATATTTGATGGTTTTTGTAAC
GCGTTATCTTGCCGACTTTTCCCATCTTGCGTCTATATTCATATTATTGC
AGAAGATGAAGTCTTCAAGTATGAATATCTTCAGGTTATTAGGGTTATGA
AGGGTAAGAAGTTCTCATTGCCTGTTTAAATTCTTTGGACGTTCTCTATA
TGGCTCGAGTCCGTGGCTATTTTGCCCCAGCTTTTCATGCTTCAGCGCAC
TGGGGAGGCGGACACCATAACAACGCATTATCTTTTCGCTTTGGGATTGT
ATCGTGCCCTTTACATCCCCAATTGGATTTATCGCTATTTCGCAGAGAGC
CACTTTCAGCCTATCCCTGTTGTAGCCGGTATCATCCAGACACTCTTATA
TTCTGATTTCTTTTATATCTATTACACCAAATTTATTCTGGGCTTTCACG
GACTCTTTCTATAATACGACTTTTAAAATCCTGTTCATCGGCTCGTCAGC
TTATATCATCTACCTCATGCTCAACGACTATAAGCCAACGCATGACCCCA
ACACTGATACCTTTAAAGTGCAGTATCTCCTCGGGTTCAGTGCTTTGTTG
GCTCTCCTTTTCCCGCACGACTATAGCGTCTCAGAGAGTTGCTCAGGGCT
TTCATTCAAGTCCCAGGCGCTATATTTGATGGTTTTTGTAACGCGTTATC
TTGCCGACTTTTCCCATCTTGCGTCTATATTCATATTATTGCAGAAGATG
AAGTCTTCAAGTATGAATATCTTCAGGTTATTAGGGTTATGAAGGGTAAG
AAGTTCTCATTGCCTGTTTAAATTCTTTGGACGTTCTCTATATGGCTCGA
GTCCGTGGCTATTTTGCCCCAGCTTTTCATGCTTCAGCGCACTGGGGAGG
CGGACACCATAACAACGCATTATCTTTTCGCTTTGGGATTGTATCGTGCC
CTTTACATCCCCAATTGGATTTATCGCTATTTCGCAGAGAGCCACTTTCA
GCCTATCCCTGTTGTAGCCGGTATCATCCAGACACTCTTATATTCTGATT
TCTTTTATATCTATTACACCAAATTTATTCTGGGCTTTCACGGACTCTTT
CTATAATACGACTTTTAAAATCCTGTTCATCGGCTCGTCAGCTTATATCA
TCTACCTCATGCTCAACGACTATAAGCCAACGCATGACCCCAACACTGAT
ACCTTTAAAGTGCAGTATCTCCTCGGGTTCAGTGCTTTGTTGGCTCTCCT
TTTCCCGCACGACTATAGCGTCTCAGAGAGTTGCTCAGGGCTTTCATTCA
AGTCCCAGGCGCTATATTTGATGGTTTTTGTAACGCGTTATCTTGCCGAC
TTTTCCCATCTTGCGTCTATATTCATATTATTGCAGAAGATGAAGTCTTC
AAGTATGAATATCTTCAGGTTATTAGGGTTATGAAGGGTAAGAAGTTCTC
ATTGCCTGTTTAAATTCTTTGGACGTTCTCTATATGGCTCGAGTCCGTGG
CTATTTTGCCCCAGCTTTTCATGCTTCAGCGCACTGGGGAGGCGGACACC
ATAACAACGCATTATCTTTTCGCTTTGGGATTGTATCGTGCCCTTTACAT
CCCCAATTGGATTTATCGCTATTTCGCAGAGAGCCACTTTCAGCCTATCC
CTGTTGTAGCCGGTATCATCCAGACACTCTTATATTCTGATTTCTTTTAT
ATCTATTACACCAAATTTATTCTGGGCTTTCACGGACTCTTTCTATAATA
CGACTTTTAAAATCCTGTTCATCGGCTCGTCAGCTTATATCATCTACCTC
ATGCTCAACGACTATAAGCCAACGCATGACCCCAACACTGATACCTTTAA
AGTGCAGTATCTCCTCGGGTTCAGTGCTTTGTTGGCTCTCCTTTTCCCGC
ACGACTATAGCGTCTCAGAGAGTTGCTCAGGGCTTTCATTCAAGTCCCAG
GCGCTATATTTGATGGTTTTTGTAACGCGTTATCTTGCCGACTTTTCCCA
TCTTGCGTCTATATTCATATTATTGCAGAAGATGAAGTCTTCAAGTATGA
ATATCTTCAGGTTATTAGGGTTATGAAGGGTAAGAAGTTCTCATTGCCTG
TTTAAATTCTTTGGACGTTCTCTATATGGCTCGAGTCCGTGGCTATTTTG
CCCCAGCTTTTCATGCTTCAGCGCACTGGGGAGGCGGACACCATAACAAC
GCATTATCTTTTCGCTTTGGGATTGTATCGTGCCCTTTACATCCCCAATT
GGATTTATCGCTATTTCGCAGAGAGCCACTTTCAGCCTATCCCTGTTGTA
GCCGGTATCATCCAGACACTCTTATATTCTGATTTCTTTTATATCTATTA
CACCAAATTTATTCTGGGCTTTCACGGACTCTTTCTATAATACGACTTTT
AAAATCCTGTTCATCGGCTCGTCAGCTTATATCATCTACCTCATGCTCAA
CGACTATAAGCCAACGCATGACCCCAACACTGATACCTTTAAAGTGCAGT
ATCTCCTCGGGTTCAGTGCTTTGTTGGCTCTCCTTTTCCCGCACGACTAT
AGCGTCTCAGAGAGTTGCTCAGGGCTTTCATTCAAGTCCCAGGCGCTATA
TTTGATGGTTTTTGTAACGCGTTATCTTGCCGACTTTTCCCATCTTGCGT
CTATATTCATATTATTGCAGAAGATGAAGTCTTCAAGTATGAATATCTTC
AGGTTATTAGGGTTATGAAGGGTAAGAAGTTCTCATTGCCTGTTTAAATT
CTTTGGACGTTCTCTATATGGCTCGAGTCCGTGGCTATTTTGCCCCAGCT
TTTCATGCTTCAGCGCACTGGGGAGGCGGACACCATAACAACGCATTATC
TTTTCGCTTTGGGATTGTATCGTGCCCTTTACATCCCCAATTGGATTTAT
CGCTATTTCGCAGAGAGCCACTTTCAGCCTATCCCTGTTGTAGCCGGTAT
CATCCAGACACTCTTATATTCTGATTTCTTTTATATCTATTACACCAAAT
TTATTCTGGGCTTTCACGGACTCTTTCTATAATACGACTTTTAAAATCCT
GTTCATCGGCTCGTCAGCTTATATCATCTACCTCATGCTCAACGACTATA
AGCCAACGCATGACCCCAACACTGATACCTTTAAAGTGCAGTATCTCCTC
GGGTTCAGTGCTTTGTTGGCTCTCCTTTTCCCGCACGACTATAGCGTCTC
AGAGAGTTGCTCAGGGCTTTCATTCAAGTCCCAGGCGCTATATTTGATGG
TTTTTGTAACGCGTTATCTTGCCGACTTTTCCCATCTTGCGTCTATATTC
ATATTATTGCAGAAGATGAAGTCTTCAAGTATGAATATCTTCAGGTTATT
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0046923ER retention sequence binding
Vocabulary: Biological Process
TermDefinition
GO:0006621protein retention in ER lumen
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KDELR2CAN33_18760Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18760-T1CAN33_18760-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18760-T1.cdsCAN33_18760-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18760-T1.exon6CAN33_18760-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_18760-T1.exon5CAN33_18760-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_18760-T1.exon4CAN33_18760-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_18760-T1.exon3CAN33_18760-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_18760-T1.exon2CAN33_18760-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_18760-T1.exon1CAN33_18760-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR000133
DBxrefPFAM:PF00810
ProductER lumen protein-retaining receptor 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1600514..1601431 -
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