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CAN33_18765-T1, CAN33_18765-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18765-T1
Unique NameCAN33_18765-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1604471..1605589-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18765-T1 ID=CAN33_18765-T1|Name=CAN33_18765-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1119bp|location=Sequence derived from alignment at NKJJ01000011.1:1604471..1605589- (Aspergillus niger FDAARGOS_311)
ATGTGTTCAAAACGAAAATCAGTATTTTCGCTACCCTCTGATAGCGAAAA
AAAGAAAGCAAAGGTAAACATAAATGCTCGTTTATCTCGGCTTACACTGA
CATCTTGGAAGTACAATGATGACTTGCAGCTTGCGAAAGATTCAATCCCC
TCCACCCACAGCCCGCAAAGCAAAGAGAATAATTTCGTCCTTCTGAGAAC
ATTGCTTCAGGATATTATACAGAGCCACGGCGATACTCAAAGCCACGGAT
CCCAGACCGACACCGATATCTTTACTGCAGCTACTGAGCTCGACGCTGCA
TTACAGCGTGCAGCAGGTACCATAAAATCTACTACCAAACCCTATGAGGG
TGCAACACTAGCGCTAGAGACATCGGAAGCCAATGTGGAGTGTTCTTTGC
CCCCTTTACCTCCAATATTGGATGACATGCTTGAGAGGGCAGTTTTCACA
CACCCGGGTGTCAGCAACAACTCCGGAGCTACTTACGATCGGCTCGAGGT
TCTTGGAGATGCATATATTGAACTTATCTCCACGAAGCTCATCTGGGACA
GATTCCAGGATATTCCTTCGGGTCAAATATCTCAAATACGCGAGAGACTT
GTAAAGAATGAGACACTGTCTGATTATGCGTCTAAGTACGGACTCGACAG
CAGGGCTTCCGTACCTCCGGACTATCGGAAGCAACCCAAAAGATGGCTTA
AAACCAAGGCGGACATCTTTGAGGCTTATGTAGCTGCCGTTGTCCTGTCA
GATACCAGCAATGGTTATTGTGTGGCTGAAGAATGGCTAAGACAATTGTG
GTCTCCGAAGCTTGAAAAGCTTGAAAAACCAAAATCCGCCTTGCATGCCA
AAGAAGCACTCGCAAAGAAAATCATGGGCAAGGGGATTAAGCTCAATTAC
ATCGATGAGCGCCCTCCTGCTCAGCGCGGCAGGGGGCTACAGACATATTT
TATCGGAGTTTATCTCACTGGCTGGGGCTGGAACCATAAGCACCTTGGCT
CTGGTCAAGGTTCTAATAAAGCAATTGCAGGAAATGAGGCGGCCGAGCAG
GCATTGTTAAATGAACCTCTAATCGAAAAGATCATGGAAGTTAAGAAAGC
ACATCTAGCACAAAGATAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1604471..1605589-

>CAN33_18765-T1 ID=CAN33_18765-T1|Name=CAN33_18765-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2142bp|location=Sequence derived from alignment at NKJJ01000011.1:1604471..1605589- (Aspergillus niger FDAARGOS_311)
TACAATGATGACTTGCAGCTTGCGAAAGATTCAATCCCCTCCACCCACAG
CCCGCAAAGCAAAGAGAATAATTTCGTCCTTCTGAGAACATTGCTTCAGG
ATATTATACAGAGCCACGGCGATACTCAAAGCCACGGATCCCAGACCGAC
ACCGATATCTTTACTGCAGCTACTGAGCTCGACGCTGCATTACAGCGTGC
AGCAGGTACCATAAAATCTACTACCAAACCCTATGAGGGTGCAACACTAG
CGCTAGAGACATCGGAAGCCAATGTGGAGTGTTCTTTGCCCCCTTTACCT
CCAATATTGGATGACATGCTTGAGAGGGCAGTTTTCACACACCCGGGTGT
CAGCAACAACTCCGGAGCTACTTACGATCGGCTCGAGGTTCTTGGAGATG
CATATATTGAACTTATCTCCACGAAGCTCATCTGGGACAGATTCCAGGAT
ATTCCTTCGGGTCAAATATCTCAAATACGCGAGAGACTTGTAAAGAATGA
GACACTGTCTGATTATGCGTCTAAGTACGGACTCGACAGCAGGGCTTCCG
TACCTCCGGACTATCGGAAGCAACCCAAAAGATGGCTTAAAACCAAGGCG
GACATCTTTGAGGCTTATGTAGCTGCCGTTGTCCTGTCAGATACCAGCAA
TGGTTATTGTGTGGCTGAAGAATGGCTAAGACAATTGTGGTCTCCGAAGC
TTGAAAAGCTTGAAAAACCAAAATCCGCCTTGCATGCCAAAGAAGCACTC
GCAAAGAAAATCATGGGCAAGGGGATTAAGCTCAATTACATCGATGAGCG
CCCTCCTGCTCAGCGCGGCAGGGGGCTACAGACATATTTTATCGGAGTTT
ATCTCACTGGCTGGGGCTGGAACCATAAGCACCTTGGCTCTGGTCAAGGT
TCTAATAAAGCAATTGCAGGAAATGAGGCGGCCGAGCAGGCATTGTTAAA
TGAACCTCTAATCGAAAAGATCATGGAAGTTAAGAAAGCACATCTAGCAC
AAAGATAAATGTGTTCAAAACGAAAATCAGTATTTTCGCTACCCTCTGAT
AGCGAAAAAAAGAAAGCAAAGTACAATGATGACTTGCAGCTTGCGAAAGA
TTCAATCCCCTCCACCCACAGCCCGCAAAGCAAAGAGAATAATTTCGTCC
TTCTGAGAACATTGCTTCAGGATATTATACAGAGCCACGGCGATACTCAA
AGCCACGGATCCCAGACCGACACCGATATCTTTACTGCAGCTACTGAGCT
CGACGCTGCATTACAGCGTGCAGCAGGTACCATAAAATCTACTACCAAAC
CCTATGAGGGTGCAACACTAGCGCTAGAGACATCGGAAGCCAATGTGGAG
TGTTCTTTGCCCCCTTTACCTCCAATATTGGATGACATGCTTGAGAGGGC
AGTTTTCACACACCCGGGTGTCAGCAACAACTCCGGAGCTACTTACGATC
GGCTCGAGGTTCTTGGAGATGCATATATTGAACTTATCTCCACGAAGCTC
ATCTGGGACAGATTCCAGGATATTCCTTCGGGTCAAATATCTCAAATACG
CGAGAGACTTGTAAAGAATGAGACACTGTCTGATTATGCGTCTAAGTACG
GACTCGACAGCAGGGCTTCCGTACCTCCGGACTATCGGAAGCAACCCAAA
AGATGGCTTAAAACCAAGGCGGACATCTTTGAGGCTTATGTAGCTGCCGT
TGTCCTGTCAGATACCAGCAATGGTTATTGTGTGGCTGAAGAATGGCTAA
GACAATTGTGGTCTCCGAAGCTTGAAAAGCTTGAAAAACCAAAATCCGCC
TTGCATGCCAAAGAAGCACTCGCAAAGAAAATCATGGGCAAGGGGATTAA
GCTCAATTACATCGATGAGCGCCCTCCTGCTCAGCGCGGCAGGGGGCTAC
AGACATATTTTATCGGAGTTTATCTCACTGGCTGGGGCTGGAACCATAAG
CACCTTGGCTCTGGTCAAGGTTCTAATAAAGCAATTGCAGGAAATGAGGC
GGCCGAGCAGGCATTGTTAAATGAACCTCTAATCGAAAAGATCATGGAAG
TTAAGAAAGCACATCTAGCACAAAGATAAATGTGTTCAAAACGAAAATCA
GTATTTTCGCTACCCTCTGATAGCGAAAAAAAGAAAGCAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0004525ribonuclease III activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_18765CAN33_18765Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18765-T1CAN33_18765-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18765-T1.cdsCAN33_18765-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18765-T1.exon2CAN33_18765-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_18765-T1.exon1CAN33_18765-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036389
DBxrefInterPro:IPR000999
DBxrefPFAM:PF14622
DBxrefPFAM:PF00636
ProductRibonuclease III domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1604471..1605589 -
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