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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:1728342..1730122- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_18825-T1 ID=CAN33_18825-T1|Name=CAN33_18825-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1781bp|location=Sequence derived from alignment at NKJJ01000011.1:1728342..1730122- (Aspergillus niger FDAARGOS_311)
ATGCCACCCAAGAAAAGCGCACCCAAGCCGGCTGCGGCATCAGCTGCGAC
GGCAAAGGGTAAACGGGCCACATCTACTACAACTACTACGACGAAGGCAG
CTACGAAAGCAACTACAAAGGCAACCACCAGAACAACAACGAAAGCGAAT
AAGACAACCGCCACGACCACTACTGCTCGCAAAGTTCCAATTGACAAGCG
AGAGACCCCTTCGAAGCCCAAGAAGACCACCAAGAGACAACCCGTGAAAT
CCACCACAGCTACCAAAGGTGGAACAGTCGACAACCTTGCAAGCAAGAAG
CATGAAGCTGAGCCTGCGAGACGTGAGAAGCGGAAAGCAGAAGTTATCGA
TGAAGCTCCTGCTCGCGATTTGAAGAAAGCTCGTGTTGCTAAACCCCGGG
TTACTAAACTGAAGCCGAAGGTGGTCATCAACCATGCGCCAACCACTCGA
TTAAATGTCTATGTGTGCGGTGAAGGCAGCTCAGGCGAGTTGGGGCTAGG
ATCTGCTAAGAATGCAGTTGATGTGAAGCGGCCTCGGTTGAATGCCAACT
TGCCAGCGGACCGTGTCGGTGCTGTCCAGGTCGCTGTTGGTGGCATGCAT
TGCGTTGCGCTTACGTATGACAACAGGATCCTTACATGGGGCGTCAACGA
TCAAGGAGCCCTTGGCAGAGATACTGCTTGGGATGGTGGGTACAAAGATA
TCGACGAAGCCAACAATGGGTCAGACTCGGAATCCGATGATGACATTGCT
CTAAACCCCTACGAATCAACTCCCACCGCTATTCCGTCAGAGGCTTTCCC
GAAAGACACCGTCTTCGTTCAAGTCGCTGCTGGCGACAGCTCAAGCTTTG
CCCTTACAGATGATGGTCAAGTTTATGGTTGGGGAACATTCAGAGTAAGT
CAAGCTTTGCACGCCCTTGTATACAGAGCTGCTTGAGCTAAGAGGCGATT
TAGAGCAATGATGGTATCTTAGGTTTTGATGCCGCCAATAAAGTCCAACA
TACGCCTAGTCTGATACCGTCTTTGAAGAAAATCAAACACCTGGCATGTG
GCGATAATCACGTCTTAGCACTGAATGATAAAGGTGCTGTGTTATCATGG
GGTTCGGGTCAGCAAAACCAATTGGGCCGTCGTATCATTGAGCGAAACAG
GCTGAACGGTCTGCAGCCGCGCGAGTTTGGCCTGCCGAAGAATATTGTGC
ATATTGGCTGTGGTGCTTTCCATTCATTCGCTGTTCATCAGTCTGGAAAG
GTTTACGCATGGGGTCTGAACAGTTTCGGCGAAACGGGTATCAGGGCTGG
TGCCGGTGATGACGAAGCTGCGATTGTGCACCCCACCGTCGTGGATTCGC
TATCTGGAAAAGCAGTCACACAAATCTGCGGCGGCGCCCATCATTCGCTT
GCTATCGCTAATGATGGCGAGTGCCTTGTATGGGGACGATTGGATGGCTA
CCAGACAGGTCTGAAAATCGATAGTCTAGCCGAGGATGCGGTCATCAAGG
ACGAGCGTGGGCGGCCTCGTATCTTGATAGATCCCAAAGCTGTTCCTGGA
GTCAAGGCCATTGCTGTTGCAGCCGGTTCAGACCATTCACTCGTCATTGA
TGTAGAGGGTCGTCCTTGGTCGTGGGGCTTTTCCGCCACCTATCAAACGG
GCCAAGGTACACCTGATGACATCGAAGTAGCGACTGTCATCGAGAATACT
GCCGTTCGTGGTAAGAAGTTAAACTGGGCAGGTGGTGGTGGTCAATTCTC
TGTGTTCACAGAGCCTGCAGCATTAGCATAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:1728342..1730122- >CAN33_18825-T1 ID=CAN33_18825-T1|Name=CAN33_18825-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3444bp|location=Sequence derived from alignment at NKJJ01000011.1:1728342..1730122- (Aspergillus niger FDAARGOS_311)
AGCAATGATGGTATCTTAGGTTTTGATGCCGCCAATAAAGTCCAACATAC
GCCTAGTCTGATACCGTCTTTGAAGAAAATCAAACACCTGGCATGTGGCG
ATAATCACGTCTTAGCACTGAATGATAAAGGTGCTGTGTTATCATGGGGT
TCGGGTCAGCAAAACCAATTGGGCCGTCGTATCATTGAGCGAAACAGGCT
GAACGGTCTGCAGCCGCGCGAGTTTGGCCTGCCGAAGAATATTGTGCATA
TTGGCTGTGGTGCTTTCCATTCATTCGCTGTTCATCAGTCTGGAAAGGTT
TACGCATGGGGTCTGAACAGTTTCGGCGAAACGGGTATCAGGGCTGGTGC
CGGTGATGACGAAGCTGCGATTGTGCACCCCACCGTCGTGGATTCGCTAT
CTGGAAAAGCAGTCACACAAATCTGCGGCGGCGCCCATCATTCGCTTGCT
ATCGCTAATGATGGCGAGTGCCTTGTATGGGGACGATTGGATGGCTACCA
GACAGGTCTGAAAATCGATAGTCTAGCCGAGGATGCGGTCATCAAGGACG
AGCGTGGGCGGCCTCGTATCTTGATAGATCCCAAAGCTGTTCCTGGAGTC
AAGGCCATTGCTGTTGCAGCCGGTTCAGACCATTCACTCGTCATTGATGT
AGAGGGTCGTCCTTGGTCGTGGGGCTTTTCCGCCACCTATCAAACGGGCC
AAGGTACACCTGATGACATCGAAGTAGCGACTGTCATCGAGAATACTGCC
GTTCGTGGTAAGAAGTTAAACTGGGCAGGTGGTGGTGGTCAATTCTCTGT
GTTCACAGAGCCTGCAGCATTAGCATAAATGCCACCCAAGAAAAGCGCAC
CCAAGCCGGCTGCGGCATCAGCTGCGACGGCAAAGGGTAAACGGGCCACA
TCTACTACAACTACTACGACGAAGGCAGCTACGAAAGCAACTACAAAGGC
AACCACCAGAACAACAACGAAAGCGAATAAGACAACCGCCACGACCACTA
CTGCTCGCAAAGTTCCAATTGACAAGCGAGAGACCCCTTCGAAGCCCAAG
AAGACCACCAAGAGACAACCCGTGAAATCCACCACAGCTACCAAAGGTGG
AACAGTCGACAACCTTGCAAGCAAGAAGCATGAAGCTGAGCCTGCGAGAC
GTGAGAAGCGGAAAGCAGAAGTTATCGATGAAGCTCCTGCTCGCGATTTG
AAGAAAGCTCGTGTTGCTAAACCCCGGGTTACTAAACTGAAGCCGAAGGT
GGTCATCAACCATGCGCCAACCACTCGATTAAATGTCTATGTGTGCGGTG
AAGGCAGCTCAGGCGAGTTGGGGCTAGGATCTGCTAAGAATGCAGTTGAT
GTGAAGCGGCCTCGGTTGAATGCCAACTTGCCAGCGGACCGTGTCGGTGC
TGTCCAGGTCGCTGTTGGTGGCATGCATTGCGTTGCGCTTACGTATGACA
ACAGGATCCTTACATGGGGCGTCAACGATCAAGGAGCCCTTGGCAGAGAT
ACTGCTTGGGATGGTGGGTACAAAGATATCGACGAAGCCAACAATGGGTC
AGACTCGGAATCCGATGATGACATTGCTCTAAACCCCTACGAATCAACTC
CCACCGCTATTCCGTCAGAGGCTTTCCCGAAAGACACCGTCTTCGTTCAA
GTCGCTGCTGGCGACAGCTCAAGCTTTGCCCTTACAGATGATGGTCAAGT
TTATGGTTGGGGAACATTCAGAAGCAATGATGGTATCTTAGGTTTTGATG
CCGCCAATAAAGTCCAACATACGCCTAGTCTGATACCGTCTTTGAAGAAA
ATCAAACACCTGGCATGTGGCGATAATCACGTCTTAGCACTGAATGATAA
AGGTGCTGTGTTATCATGGGGTTCGGGTCAGCAAAACCAATTGGGCCGTC
GTATCATTGAGCGAAACAGGCTGAACGGTCTGCAGCCGCGCGAGTTTGGC
CTGCCGAAGAATATTGTGCATATTGGCTGTGGTGCTTTCCATTCATTCGC
TGTTCATCAGTCTGGAAAGGTTTACGCATGGGGTCTGAACAGTTTCGGCG
AAACGGGTATCAGGGCTGGTGCCGGTGATGACGAAGCTGCGATTGTGCAC
CCCACCGTCGTGGATTCGCTATCTGGAAAAGCAGTCACACAAATCTGCGG
CGGCGCCCATCATTCGCTTGCTATCGCTAATGATGGCGAGTGCCTTGTAT
GGGGACGATTGGATGGCTACCAGACAGGTCTGAAAATCGATAGTCTAGCC
GAGGATGCGGTCATCAAGGACGAGCGTGGGCGGCCTCGTATCTTGATAGA
TCCCAAAGCTGTTCCTGGAGTCAAGGCCATTGCTGTTGCAGCCGGTTCAG
ACCATTCACTCGTCATTGATGTAGAGGGTCGTCCTTGGTCGTGGGGCTTT
TCCGCCACCTATCAAACGGGCCAAGGTACACCTGATGACATCGAAGTAGC
GACTGTCATCGAGAATACTGCCGTTCGTGGTAAGAAGTTAAACTGGGCAG
GTGGTGGTGGTCAATTCTCTGTGTTCACAGAGCCTGCAGCATTAGCATAA
ATGCCACCCAAGAAAAGCGCACCCAAGCCGGCTGCGGCATCAGCTGCGAC
GGCAAAGGGTAAACGGGCCACATCTACTACAACTACTACGACGAAGGCAG
CTACGAAAGCAACTACAAAGGCAACCACCAGAACAACAACGAAAGCGAAT
AAGACAACCGCCACGACCACTACTGCTCGCAAAGTTCCAATTGACAAGCG
AGAGACCCCTTCGAAGCCCAAGAAGACCACCAAGAGACAACCCGTGAAAT
CCACCACAGCTACCAAAGGTGGAACAGTCGACAACCTTGCAAGCAAGAAG
CATGAAGCTGAGCCTGCGAGACGTGAGAAGCGGAAAGCAGAAGTTATCGA
TGAAGCTCCTGCTCGCGATTTGAAGAAAGCTCGTGTTGCTAAACCCCGGG
TTACTAAACTGAAGCCGAAGGTGGTCATCAACCATGCGCCAACCACTCGA
TTAAATGTCTATGTGTGCGGTGAAGGCAGCTCAGGCGAGTTGGGGCTAGG
ATCTGCTAAGAATGCAGTTGATGTGAAGCGGCCTCGGTTGAATGCCAACT
TGCCAGCGGACCGTGTCGGTGCTGTCCAGGTCGCTGTTGGTGGCATGCAT
TGCGTTGCGCTTACGTATGACAACAGGATCCTTACATGGGGCGTCAACGA
TCAAGGAGCCCTTGGCAGAGATACTGCTTGGGATGGTGGGTACAAAGATA
TCGACGAAGCCAACAATGGGTCAGACTCGGAATCCGATGATGACATTGCT
CTAAACCCCTACGAATCAACTCCCACCGCTATTCCGTCAGAGGCTTTCCC
GAAAGACACCGTCTTCGTTCAAGTCGCTGCTGGCGACAGCTCAAGCTTTG
CCCTTACAGATGATGGTCAAGTTTATGGTTGGGGAACATTCAGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009091 |
| DBxref | InterPro:IPR000408 |
| DBxref | PFAM:PF13540 |
| DBxref | PFAM:PF00415 |
| Product | Regulator of chromosome condensation (RCC1) repeat family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:1728342..1730122 - |
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