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CAN33_18975-T1, CAN33_18975-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_18975-T1
Unique NameCAN33_18975-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1807707..1810691+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_18975-T1 ID=CAN33_18975-T1|Name=CAN33_18975-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2985bp|location=Sequence derived from alignment at NKJJ01000011.1:1807707..1810691+ (Aspergillus niger FDAARGOS_311)
ATGGATAACCCACATAAGACCCCCAGCCGACCGAGTGGTATTCCTCGCTT
GGCCTCCAGATTACCTCTACCGACGTCTGCCGCCAGTAAACCCCTGCGTC
CCTCCCCCTCACGCGAGAAGCTACAAACCGACCCGGGTCTCCACGCCAGC
CGGTTGAGCAGACCTTCTCAAGAGCCGGTGTTCAAAAAGCCCTTACCGAA
GTATACGGTGCCGAAGAAGTCCTTAGGTACCCAGCGTCAAGAAAGAGAGA
TTTCTCAGACAAGGACAAGCGATACGGGGATAACAGAACCCGAAGGGGCA
CTGAACAACAAATCCCTGTATCTGGAGGCCGACAATGTACCAGCCCATGA
TGCAGAGTTTCGAGGTCGCACACGACCATCGCTCTCTGAGCGAACAATTG
AGACTCTTTCCCAGATCCCCCCTTCGCCTAGACCTCAGAGCAGACAGTCT
AGTAGTTTCTTCGGCGCAACTAGTCCCATGCGCTCGCCGTCTCGTCCGCC
GTCTGCAATGACAAGCTATTCAAGGTCGCCGTCAAGATCATCTTCTCGTC
AACCCAGTGGAAGCGACTATCTTTCCCGCCCGCCTTCGTCCATGCGCCTT
CCATCGAGGAGTGGTCCATCGTTTTCTGCGAACAGTGCAACATCCGATCA
AAGCTCCATTCCAAATACAGATAGTCCATCGAAATTGAAACCGCCCTCTA
CTAGGATCACACCCTACGCCCGGAAAAATGACGTGACATTGTCATCCAAT
CCTCGTCATGCACCTACCAGGGTGTCTACGAGGCCCACAGAACCGACTGT
AGATGCTCCGCAGCAACGCCTCGAAGTGAGGAAAACCCGGAAGGTCCAGC
AGGGTCTCTCGGGCCAGAAGCCATCCTTGATGGGTTCACGGTCGCCATCG
GCAAAATCCACTTCATCAGATCTTACTCCGGAACAGCAGACTGAGATGGA
AACTCGAAAGGTCTCGAAATCGTCTAGCGCTTTGAGGGAAAGTATCGCGA
AGGCGAAGGCCGCGCGGAAGGCTGAGGCTCAGAAAACCACGGAGTCAACA
ACTGCTGCCGGTGGATTCAATTTCGATACGGACGATCCCTTCAACCAAGG
TCCTAAGGATCCAAACCATGGACTTCTGCGGAAGCGCATCGATGCAGGTC
GAACTTCTGGTCACTTGAATATCGCGGCTATGTCTCTTAAAGAACTGCCC
AAAGAAGTCATGACGATGTACGATTTCGATTCCAACTCCACCACCGATTG
GTATGAGAGTGTGGATCTTGTTAAACTTATCGCTGCGGATAACGAGTTCA
CGGAGCTCCCCGATGACGCTTTCCCCGATATCGATGCACACGAGCTAGAC
CCAGAGGTTGACGAAAGAGGAAATCAATTTGGCGGGCTTGAGCTTCTAGA
TCTTCATGGCAATATCTTACAATCACTACCAGTAGGCCTCAGAAGGCTGG
AGCGGCTGCACACTCTGAATCTATCAAACAACAATCTCAATATGGACGAC
ATAAATGTTGTTATGGAACTAGAAACTCTCAGGGATCTGAGACTCGCCAA
GAACAAGCTTCAAGGAGGCCTTACTCCAGATATCGGACGCCTCAGCAACC
TGGAAGTACTGGACTTGCACGAGAACTCCTTGACAGAGCTTCCGGGAGAG
CTTGCAAAACTGGCCTCCCTCCGAGTCTTAAACGTGGGCAATAACCAATT
AAGCGCATTACCATTCGAGCAATTGTACATGCTCCCGCTTAAGGAGCTCC
ACGCCCCGAGGAACAAGTTGAAGGGAACTCTTTTGCCAGCGTCTGTGCAA
AAGTTCGAGACACTACAGATCTTGGACGTAGCCAGCAACGCCTTGGTGAG
GCTCTCGGAGAACGAAGACCTCGAACTTCCCAATCTGCAGAGTCTAGCAA
TCAATACGAACCGCATTCAATCTCTACCCGATGTTTCATCGTGGCAAGCT
CTCTTGACCCTGTTAGCGGAAGACAACAGTTTATCGGATCTTCCTCACGG
GTTCACTGGCCTGAAGAATATCAGGAATGTTGACTTCACTGGTAACGATA
TTTCCAAGCTGGACGAGAAGATCGGCCTAATGGAGAGTCTCGTCAACTTC
CGCATAGCCAATAATCCCCTGCGGGAACGCAAGTTTCTGAGCATGAACAC
GGAGGACCTGAAGCGCGATTTGCGTCACCGATGCGAACCGGAACCGCAAG
ATACAGACGATGAAGGCTCTGTTGCGACTCAGTTTACGTTGGCGCCAGAA
ACACCGGTCCAAACGGCCTCCTGGCAAATCAAGTCTGGTGGTGTCCTCGA
CAAGTCATACACTGATCTGCGGGAGATAGAAGTACAGGAGTTGGAACGCA
TCGATTTCCACGAAGTCCGATGCCTCCAATTACAACACAACGAGCTAGAA
TGCTTTCCTGTTCCGGCTCTCAGCATGCTCGCATCTAACCTAGCTGATCT
GGATCTTTCAAATAACCCGCTCAATAGCGGATCTCTCTTCTCAGGACCCG
TTACCCTCCCCAGTCTTCAGAATCTCACCATTACCGCTGCCGGCTTGACT
ACACTTGAGCCGCTACTAAGTTATCTTACTGCGCCAGGCCTCATCTACCT
TGATGTTTCATCCAACCGTCTCTCCGGATCCCTTCCGGTTGTGCGCCGGA
GCTACCCGAACCTGACAACATTATTGGCTTCTGATAACCGAATCAGCAAT
CTCGACTTTGAAGCGGTGCAAGGTCTACAGGTTCTAGACGTAGGGAACAA
CGATATTGGCGTTCTGCCGCCGAAGCTCGGCCTTTTGAGGACCGAAGGTT
CTAGCAAGAATTGGGGCAACGGCTCACCCCTGCGACGCTTCGAAGTAGCA
GGGAATAGTTTTCGGGTTCCCCGCTGGCAGGTGGTAGCCAAGGGGACCGA
TGCGGTCCTCGAATGGCTCAAAGATCGTATCCCTGAAGAAGAACTTCGTG
AGTGGGAAACGGGCGACGAGTCAAATGACGAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1807707..1810691+

>CAN33_18975-T1 ID=CAN33_18975-T1|Name=CAN33_18975-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2985bp|location=Sequence derived from alignment at NKJJ01000011.1:1807707..1810691+ (Aspergillus niger FDAARGOS_311)
ATGGATAACCCACATAAGACCCCCAGCCGACCGAGTGGTATTCCTCGCTT
GGCCTCCAGATTACCTCTACCGACGTCTGCCGCCAGTAAACCCCTGCGTC
CCTCCCCCTCACGCGAGAAGCTACAAACCGACCCGGGTCTCCACGCCAGC
CGGTTGAGCAGACCTTCTCAAGAGCCGGTGTTCAAAAAGCCCTTACCGAA
GTATACGGTGCCGAAGAAGTCCTTAGGTACCCAGCGTCAAGAAAGAGAGA
TTTCTCAGACAAGGACAAGCGATACGGGGATAACAGAACCCGAAGGGGCA
CTGAACAACAAATCCCTGTATCTGGAGGCCGACAATGTACCAGCCCATGA
TGCAGAGTTTCGAGGTCGCACACGACCATCGCTCTCTGAGCGAACAATTG
AGACTCTTTCCCAGATCCCCCCTTCGCCTAGACCTCAGAGCAGACAGTCT
AGTAGTTTCTTCGGCGCAACTAGTCCCATGCGCTCGCCGTCTCGTCCGCC
GTCTGCAATGACAAGCTATTCAAGGTCGCCGTCAAGATCATCTTCTCGTC
AACCCAGTGGAAGCGACTATCTTTCCCGCCCGCCTTCGTCCATGCGCCTT
CCATCGAGGAGTGGTCCATCGTTTTCTGCGAACAGTGCAACATCCGATCA
AAGCTCCATTCCAAATACAGATAGTCCATCGAAATTGAAACCGCCCTCTA
CTAGGATCACACCCTACGCCCGGAAAAATGACGTGACATTGTCATCCAAT
CCTCGTCATGCACCTACCAGGGTGTCTACGAGGCCCACAGAACCGACTGT
AGATGCTCCGCAGCAACGCCTCGAAGTGAGGAAAACCCGGAAGGTCCAGC
AGGGTCTCTCGGGCCAGAAGCCATCCTTGATGGGTTCACGGTCGCCATCG
GCAAAATCCACTTCATCAGATCTTACTCCGGAACAGCAGACTGAGATGGA
AACTCGAAAGGTCTCGAAATCGTCTAGCGCTTTGAGGGAAAGTATCGCGA
AGGCGAAGGCCGCGCGGAAGGCTGAGGCTCAGAAAACCACGGAGTCAACA
ACTGCTGCCGGTGGATTCAATTTCGATACGGACGATCCCTTCAACCAAGG
TCCTAAGGATCCAAACCATGGACTTCTGCGGAAGCGCATCGATGCAGGTC
GAACTTCTGGTCACTTGAATATCGCGGCTATGTCTCTTAAAGAACTGCCC
AAAGAAGTCATGACGATGTACGATTTCGATTCCAACTCCACCACCGATTG
GTATGAGAGTGTGGATCTTGTTAAACTTATCGCTGCGGATAACGAGTTCA
CGGAGCTCCCCGATGACGCTTTCCCCGATATCGATGCACACGAGCTAGAC
CCAGAGGTTGACGAAAGAGGAAATCAATTTGGCGGGCTTGAGCTTCTAGA
TCTTCATGGCAATATCTTACAATCACTACCAGTAGGCCTCAGAAGGCTGG
AGCGGCTGCACACTCTGAATCTATCAAACAACAATCTCAATATGGACGAC
ATAAATGTTGTTATGGAACTAGAAACTCTCAGGGATCTGAGACTCGCCAA
GAACAAGCTTCAAGGAGGCCTTACTCCAGATATCGGACGCCTCAGCAACC
TGGAAGTACTGGACTTGCACGAGAACTCCTTGACAGAGCTTCCGGGAGAG
CTTGCAAAACTGGCCTCCCTCCGAGTCTTAAACGTGGGCAATAACCAATT
AAGCGCATTACCATTCGAGCAATTGTACATGCTCCCGCTTAAGGAGCTCC
ACGCCCCGAGGAACAAGTTGAAGGGAACTCTTTTGCCAGCGTCTGTGCAA
AAGTTCGAGACACTACAGATCTTGGACGTAGCCAGCAACGCCTTGGTGAG
GCTCTCGGAGAACGAAGACCTCGAACTTCCCAATCTGCAGAGTCTAGCAA
TCAATACGAACCGCATTCAATCTCTACCCGATGTTTCATCGTGGCAAGCT
CTCTTGACCCTGTTAGCGGAAGACAACAGTTTATCGGATCTTCCTCACGG
GTTCACTGGCCTGAAGAATATCAGGAATGTTGACTTCACTGGTAACGATA
TTTCCAAGCTGGACGAGAAGATCGGCCTAATGGAGAGTCTCGTCAACTTC
CGCATAGCCAATAATCCCCTGCGGGAACGCAAGTTTCTGAGCATGAACAC
GGAGGACCTGAAGCGCGATTTGCGTCACCGATGCGAACCGGAACCGCAAG
ATACAGACGATGAAGGCTCTGTTGCGACTCAGTTTACGTTGGCGCCAGAA
ACACCGGTCCAAACGGCCTCCTGGCAAATCAAGTCTGGTGGTGTCCTCGA
CAAGTCATACACTGATCTGCGGGAGATAGAAGTACAGGAGTTGGAACGCA
TCGATTTCCACGAAGTCCGATGCCTCCAATTACAACACAACGAGCTAGAA
TGCTTTCCTGTTCCGGCTCTCAGCATGCTCGCATCTAACCTAGCTGATCT
GGATCTTTCAAATAACCCGCTCAATAGCGGATCTCTCTTCTCAGGACCCG
TTACCCTCCCCAGTCTTCAGAATCTCACCATTACCGCTGCCGGCTTGACT
ACACTTGAGCCGCTACTAAGTTATCTTACTGCGCCAGGCCTCATCTACCT
TGATGTTTCATCCAACCGTCTCTCCGGATCCCTTCCGGTTGTGCGCCGGA
GCTACCCGAACCTGACAACATTATTGGCTTCTGATAACCGAATCAGCAAT
CTCGACTTTGAAGCGGTGCAAGGTCTACAGGTTCTAGACGTAGGGAACAA
CGATATTGGCGTTCTGCCGCCGAAGCTCGGCCTTTTGAGGACCGAAGGTT
CTAGCAAGAATTGGGGCAACGGCTCACCCCTGCGACGCTTCGAAGTAGCA
GGGAATAGTTTTCGGGTTCCCCGCTGGCAGGTGGTAGCCAAGGGGACCGA
TGCGGTCCTCGAATGGCTCAAAGATCGTATCCCTGAAGAAGAACTTCGTG
AGTGGGAAACGGGCGACGAGTCAAATGACGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_18975CAN33_18975Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18975-T1.exon1CAN33_18975-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18975-T1.cdsCAN33_18975-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_18975-T1CAN33_18975-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR001611
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR003591
DBxrefPFAM:PF13855
DBxrefPFAM:PF12799
ProductLeucine Rich repeats (2 copies) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1807707..1810691 +
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