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CAN33_19080-T1, CAN33_19080-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_19080-T1
Unique NameCAN33_19080-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1883727..1885057-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_19080-T1 ID=CAN33_19080-T1|Name=CAN33_19080-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1331bp|location=Sequence derived from alignment at NKJJ01000011.1:1883727..1885057- (Aspergillus niger FDAARGOS_311)
ATGGCCATTCATCCGAATTTCCCATCTGAAGTGAACCCGAGAGGATCCCT
CTCACCACAGCAGGCTCGCGCTATCTCCGTCTGGACTGAACAGGCAGCTG
CATCCTTGGAGAGTCTGACTCTCTCCGAGTCAGTGCCGGTCGCCGATTCC
AATGTGGCCTTTGCCCAGTCCACTCCTACGCGCGCAGGCGTTCGCGGCAC
CACAGTCTCGTTATCAATTCCCTTAGATGACCCAGTCCCGACAGCGGGAA
GCCCTTCCGCGCCTAAGGTCAAGGTCTTAGGCCAGCCAACCAAGGAGACT
CAGGTGGCGTCGGTGACCTTTCGGCGCCGCGAGCCGATTCGCCGTGATAG
TCTCAAGAGGCGCGAAGCCTTGTTGAAGGGAAAGGATGGTAGTCGTCGCA
GGCAGCGTTGGGAGAATGGTATGTCTTGACATATCGGATACACGCCAGTG
GCTGGGCTTCCGCGCTTTTCCTGGGCCGGACGTGCCTTATCATTGCACTC
GATAGATGCTGACAGAATGTGCTTTCTTGCAAAGATCGTCTTCTGAACAA
TCCGTGGGCCGAGCCGCCATCCTCAAAGGATTGGGATATCCAAGCCACTC
ACACTCGTCACGACCCTTTGCCTTACTACCTTGCACCTCTCTGGGACAAT
CACTATGCGCATCTGGACCATAGGTCATCCCAGCAGATGGAGACACGGAC
CGAGAAGCATCGTGTTCCTAAGGAGCTGCGACAGAGACTAAAGCATGCAC
GTGCAGCACGCGGTATACTTCAAGATATCGAAGAGGACATCAGACAATTC
ATCCAGCGATGGAACGAGAAGCAAAGTTTACTGAAGCAGGAGGGTCTGGC
AGATGCCCCGCAATCATCCGACAGTGAATCTGAAGATGAGATCGTGTTTG
TGGGTCGAAACGGCCTGATGCACGACTCGCCTCAGAGAAGAGCAAGACTC
CAAAAGATGCGTGAGGCAATGAGTGCTCATCATGAGCATGATGGGCAGAA
GATGGTGTTTGAGAGCCTGGTTGACGACCGGGCAGCTGGATTCGGGTAAG
TGTAGACTCACCTATTCAAATCGCCGATCCATGCTTACCATAATGTTCTC
ACCTTCAGTCGCTGGCTCGTCCATTCCATCGCGTCGTATTATGGCCTGCA
CACTTGGTCTGTCACCGTCGGGGAACCTGCCCGCCGCGAGGCTTACGTTG
GCTTCTATCCGCCAGCCCCAAGCAGTCGAGCAGGACCCATATCCCCACCG
GCCGGATCGAAGGCTTGCCGTCAGGAAGCGATGATACAGCCCGGCGACGA
ACTGCCTCAACCGCTCTGGACGCAGGTTTGA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1883727..1885057-

>CAN33_19080-T1 ID=CAN33_19080-T1|Name=CAN33_19080-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3456bp|location=Sequence derived from alignment at NKJJ01000011.1:1883727..1885057- (Aspergillus niger FDAARGOS_311)
TCGCTGGCTCGTCCATTCCATCGCGTCGTATTATGGCCTGCACACTTGGT
CTGTCACCGTCGGGGAACCTGCCCGCCGCGAGGCTTACGTTGGCTTCTAT
CCGCCAGCCCCAAGCAGTCGAGCAGGACCCATATCCCCACCGGCCGGATC
GAAGGCTTGCCGTCAGGAAGCGATGATACAGCCCGGCGACGAACTGCCTC
AACCGCTCTGGACGCAGGTTTGAATCGTCTTCTGAACAATCCGTGGGCCG
AGCCGCCATCCTCAAAGGATTGGGATATCCAAGCCACTCACACTCGTCAC
GACCCTTTGCCTTACTACCTTGCACCTCTCTGGGACAATCACTATGCGCA
TCTGGACCATAGGTCATCCCAGCAGATGGAGACACGGACCGAGAAGCATC
GTGTTCCTAAGGAGCTGCGACAGAGACTAAAGCATGCACGTGCAGCACGC
GGTATACTTCAAGATATCGAAGAGGACATCAGACAATTCATCCAGCGATG
GAACGAGAAGCAAAGTTTACTGAAGCAGGAGGGTCTGGCAGATGCCCCGC
AATCATCCGACAGTGAATCTGAAGATGAGATCGTGTTTGTGGGTCGAAAC
GGCCTGATGCACGACTCGCCTCAGAGAAGAGCAAGACTCCAAAAGATGCG
TGAGGCAATGAGTGCTCATCATGAGCATGATGGGCAGAAGATGGTGTTTG
AGAGCCTGGTTGACGACCGGGCAGCTGGATTCGGATGGCCATTCATCCGA
ATTTCCCATCTGAAGTGAACCCGAGAGGATCCCTCTCACCACAGCAGGCT
CGCGCTATCTCCGTCTGGACTGAACAGGCAGCTGCATCCTTGGAGAGTCT
GACTCTCTCCGAGTCAGTGCCGGTCGCCGATTCCAATGTGGCCTTTGCCC
AGTCCACTCCTACGCGCGCAGGCGTTCGCGGCACCACAGTCTCGTTATCA
ATTCCCTTAGATGACCCAGTCCCGACAGCGGGAAGCCCTTCCGCGCCTAA
GGTCAAGGTCTTAGGCCAGCCAACCAAGGAGACTCAGGTGGCGTCGGTGA
CCTTTCGGCGCCGCGAGCCGATTCGCCGTGATAGTCTCAAGAGGCGCGAA
GCCTTGTTGAAGGGAAAGGATGGTAGTCGTCGCAGGCAGCGTTGGGAGAA
TGTCGCTGGCTCGTCCATTCCATCGCGTCGTATTATGGCCTGCACACTTG
GTCTGTCACCGTCGGGGAACCTGCCCGCCGCGAGGCTTACGTTGGCTTCT
ATCCGCCAGCCCCAAGCAGTCGAGCAGGACCCATATCCCCACCGGCCGGA
TCGAAGGCTTGCCGTCAGGAAGCGATGATACAGCCCGGCGACGAACTGCC
TCAACCGCTCTGGACGCAGGTTTGAATCGTCTTCTGAACAATCCGTGGGC
CGAGCCGCCATCCTCAAAGGATTGGGATATCCAAGCCACTCACACTCGTC
ACGACCCTTTGCCTTACTACCTTGCACCTCTCTGGGACAATCACTATGCG
CATCTGGACCATAGGTCATCCCAGCAGATGGAGACACGGACCGAGAAGCA
TCGTGTTCCTAAGGAGCTGCGACAGAGACTAAAGCATGCACGTGCAGCAC
GCGGTATACTTCAAGATATCGAAGAGGACATCAGACAATTCATCCAGCGA
TGGAACGAGAAGCAAAGTTTACTGAAGCAGGAGGGTCTGGCAGATGCCCC
GCAATCATCCGACAGTGAATCTGAAGATGAGATCGTGTTTGTGGGTCGAA
ACGGCCTGATGCACGACTCGCCTCAGAGAAGAGCAAGACTCCAAAAGATG
CGTGAGGCAATGAGTGCTCATCATGAGCATGATGGGCAGAAGATGGTGTT
TGAGAGCCTGGTTGACGACCGGGCAGCTGGATTCGGATGGCCATTCATCC
GAATTTCCCATCTGAAGTGAACCCGAGAGGATCCCTCTCACCACAGCAGG
CTCGCGCTATCTCCGTCTGGACTGAACAGGCAGCTGCATCCTTGGAGAGT
CTGACTCTCTCCGAGTCAGTGCCGGTCGCCGATTCCAATGTGGCCTTTGC
CCAGTCCACTCCTACGCGCGCAGGCGTTCGCGGCACCACAGTCTCGTTAT
CAATTCCCTTAGATGACCCAGTCCCGACAGCGGGAAGCCCTTCCGCGCCT
AAGGTCAAGGTCTTAGGCCAGCCAACCAAGGAGACTCAGGTGGCGTCGGT
GACCTTTCGGCGCCGCGAGCCGATTCGCCGTGATAGTCTCAAGAGGCGCG
AAGCCTTGTTGAAGGGAAAGGATGGTAGTCGTCGCAGGCAGCGTTGGGAG
AATGTCGCTGGCTCGTCCATTCCATCGCGTCGTATTATGGCCTGCACACT
TGGTCTGTCACCGTCGGGGAACCTGCCCGCCGCGAGGCTTACGTTGGCTT
CTATCCGCCAGCCCCAAGCAGTCGAGCAGGACCCATATCCCCACCGGCCG
GATCGAAGGCTTGCCGTCAGGAAGCGATGATACAGCCCGGCGACGAACTG
CCTCAACCGCTCTGGACGCAGGTTTGAATCGTCTTCTGAACAATCCGTGG
GCCGAGCCGCCATCCTCAAAGGATTGGGATATCCAAGCCACTCACACTCG
TCACGACCCTTTGCCTTACTACCTTGCACCTCTCTGGGACAATCACTATG
CGCATCTGGACCATAGGTCATCCCAGCAGATGGAGACACGGACCGAGAAG
CATCGTGTTCCTAAGGAGCTGCGACAGAGACTAAAGCATGCACGTGCAGC
ACGCGGTATACTTCAAGATATCGAAGAGGACATCAGACAATTCATCCAGC
GATGGAACGAGAAGCAAAGTTTACTGAAGCAGGAGGGTCTGGCAGATGCC
CCGCAATCATCCGACAGTGAATCTGAAGATGAGATCGTGTTTGTGGGTCG
AAACGGCCTGATGCACGACTCGCCTCAGAGAAGAGCAAGACTCCAAAAGA
TGCGTGAGGCAATGAGTGCTCATCATGAGCATGATGGGCAGAAGATGGTG
TTTGAGAGCCTGGTTGACGACCGGGCAGCTGGATTCGGATGGCCATTCAT
CCGAATTTCCCATCTGAAGTGAACCCGAGAGGATCCCTCTCACCACAGCA
GGCTCGCGCTATCTCCGTCTGGACTGAACAGGCAGCTGCATCCTTGGAGA
GTCTGACTCTCTCCGAGTCAGTGCCGGTCGCCGATTCCAATGTGGCCTTT
GCCCAGTCCACTCCTACGCGCGCAGGCGTTCGCGGCACCACAGTCTCGTT
ATCAATTCCCTTAGATGACCCAGTCCCGACAGCGGGAAGCCCTTCCGCGC
CTAAGGTCAAGGTCTTAGGCCAGCCAACCAAGGAGACTCAGGTGGCGTCG
GTGACCTTTCGGCGCCGCGAGCCGATTCGCCGTGATAGTCTCAAGAGGCG
CGAAGCCTTGTTGAAGGGAAAGGATGGTAGTCGTCGCAGGCAGCGTTGGG
AGAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_19080CAN33_19080Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19080-T1CAN33_19080-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19080-T1.cdsCAN33_19080-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19080-T1.exon3CAN33_19080-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_19080-T1.exon2CAN33_19080-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_19080-T1.exon1CAN33_19080-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036867
DBxrefInterPro:IPR025952
DBxrefPFAM:PF13902
ProductR3H-associated N-terminal domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1883727..1885057 -
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