You are here

Home

CAN33_19225-T1, CAN33_19225-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_19225-T1
Unique NameCAN33_19225-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1966940..1968003+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_19225-T1 ID=CAN33_19225-T1|Name=CAN33_19225-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1064bp|location=Sequence derived from alignment at NKJJ01000011.1:1966940..1968003+ (Aspergillus niger FDAARGOS_311)
ATGCCTCGGAACGCGCTCTCCTCCGAAGCGCCTCTCCCCATGTCCGCCAT
CACAGAGCAGTCCATATCGTCAGATTGGAATACCAACCGTTTAGGGGCGC
GACTGGGAGTCGATATCGCCAGCGCCGCAACTGCGGGTGCCTTGACATGT
CCTGTCATCACCGTTATTGATCGGTATGCTACTTACTACCTACCCCGATA
CATCATCCTCCTATCGTCGAGAGAGATAGCGAGAGAAAGAGCTATAAGCT
AATGAAATCAATTCCTTGAACCAGCGCGATCATCGAGAAAGCAGCCAAGG
GTGTCCCCATCCGCCAGACCATCACATCCTGCTTCCGATCCATGTTCACA
AAACCGGGGAGCTTCTTCCTCAGCACCCCATTCCTCCTTATCTACACCCT
GTACACGTCCACCTACCTCACTGCGAACACCATTGACACCTTCACCTCCA
CCGTGCGCGACAAGCCCTTCTCAACCGTCTTCCCCGGTACCGCCAAATTC
CTCACCACCACCGCAGTGAACATGGGTATTTGCGTATACAAGGACGCCAG
GTTTGCGCGCATCTTCGGTGCAAAACCTTCTCCTGCTGCTACACCTGGAT
CTACATCTACGCCCCAGCCCGCTTCCAGATCTACATCCGCATCCACCCCA
GCCTCCTGCCACCCCTCCGGCGCCGCCAAAGTCCCCAAGATCTCCTACGG
CCTCTTCTGTCTCCGCGACAGCATCACCATCTTTGCCTCCTTCAACATCC
CCGCCCTTGTCGCCCCCTCCATCCCCGATTCTATCGCCGCCACGCCCGGA
ATGAAGGCTGCGCTCGCGCAATTCTCCTGTCCGGCTCTGATGCAGTTCGC
TAGCACGCCTATGCATCTGCTCGGATTGGATCTGTATAACCGGCAACCGC
CAGGCGGATTGGGATGGCGTGAGCGCGCTTCGCGCATCAGACGCGACTAC
ATCCCCAGTTGCTTTGCGCGCATGGGCAAGATCGTTCCGGCGTATGGTGT
GGGTGGTGTGGTGAATGTGCGGATGAGAGCTTCGCTAATGGAGTATCTGG
AGGGCGGGAAGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:1966940..1968003+

>CAN33_19225-T1 ID=CAN33_19225-T1|Name=CAN33_19225-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2637bp|location=Sequence derived from alignment at NKJJ01000011.1:1966940..1968003+ (Aspergillus niger FDAARGOS_311)
ATGCCTCGGAACGCGCTCTCCTCCGAAGCGCCTCTCCCCATGTCCGCCAT
CACAGAGCAGTCCATATCGTCAGATTGGAATACCAACCGTTTAGGGGCGC
GACTGGGAGTCGATATCGCCAGCGCCGCAACTGCGGGTGCCTTGACATGT
CCTGTCATCACCGTTATTGATCGCGCGATCATCGAGAAAGCAGCCAAGGG
TGTCCCCATCCGCCAGACCATCACATCCTGCTTCCGATCCATGTTCACAA
AACCGGGGAGCTTCTTCCTCAGCACCCCATTCCTCCTTATCTACACCCTG
TACACGTCCACCTACCTCACTGCGAACACCATTGACACCTTCACCTCCAC
CGTGCGCGACAAGCCCTTCTCAACCGTCTTCCCCGGTACCGCCAAATTCC
TCACCACCACCGCAGTGAACATGGGTATTTGCGTATACAAGGACGCCAGG
TTTGCGCGCATCTTCGCCTCCTGCCACCCCTCCGGCGCCGCCAAAGTCCC
CAAGATCTCCTACGGCCTCTTCTGTCTCCGCGACAGCATCACCATCTTTG
CCTCCTTCAACATCCCCGCCCTTGTCGCCCCCTCCATCCCCGATTCTATC
GCCGCCACGCCCGGAATGAAGGCTGCGCTCGCGCAATTCTCCTGTCCGGC
TCTGATGCAGTTCGCTAGCACGCCTATGCATCTGCTCGGATTGGATCTGT
ATAACCGGCAACCGCCAGGCGGATTGGGATGGCGTGAGCGCGCTTCGCGC
ATCAGACGCGACTACATCCCCAGTTGCTTTGCGCGCATGGGCAAGATCGT
TCCGGCGTATGGTGTGGGTGGTGTGGTGAATGTGCGGATGAGAGCTTCGC
TAATGGAGTATCTGGAGGGCGGGAAGTAAATGCCTCGGAACGCGCTCTCC
TCCGAAGCGCCTCTCCCCATGTCCGCCATCACAGAGCAGTCCATATCGTC
AGATTGGAATACCAACCGTTTAGGGGCGCGACTGGGAGTCGATATCGCCA
GCGCCGCAACTGCGGGTGCCTTGACATGTCCTGTCATCACCGTTATTGAT
CGCGCGATCATCGAGAAAGCAGCCAAGGGTGTCCCCATCCGCCAGACCAT
CACATCCTGCTTCCGATCCATGTTCACAAAACCGGGGAGCTTCTTCCTCA
GCACCCCATTCCTCCTTATCTACACCCTGTACACGTCCACCTACCTCACT
GCGAACACCATTGACACCTTCACCTCCACCGTGCGCGACAAGCCCTTCTC
AACCGTCTTCCCCGGTACCGCCAAATTCCTCACCACCACCGCAGTGAACA
TGGGTATTTGCGTATACAAGGACGCCAGGTTTGCGCGCATCTTCGCCTCC
TGCCACCCCTCCGGCGCCGCCAAAGTCCCCAAGATCTCCTACGGCCTCTT
CTGTCTCCGCGACAGCATCACCATCTTTGCCTCCTTCAACATCCCCGCCC
TTGTCGCCCCCTCCATCCCCGATTCTATCGCCGCCACGCCCGGAATGAAG
GCTGCGCTCGCGCAATTCTCCTGTCCGGCTCTGATGCAGTTCGCTAGCAC
GCCTATGCATCTGCTCGGATTGGATCTGTATAACCGGCAACCGCCAGGCG
GATTGGGATGGCGTGAGCGCGCTTCGCGCATCAGACGCGACTACATCCCC
AGTTGCTTTGCGCGCATGGGCAAGATCGTTCCGGCGTATGGTGTGGGTGG
TGTGGTGAATGTGCGGATGAGAGCTTCGCTAATGGAGTATCTGGAGGGCG
GGAAGTAAATGCCTCGGAACGCGCTCTCCTCCGAAGCGCCTCTCCCCATG
TCCGCCATCACAGAGCAGTCCATATCGTCAGATTGGAATACCAACCGTTT
AGGGGCGCGACTGGGAGTCGATATCGCCAGCGCCGCAACTGCGGGTGCCT
TGACATGTCCTGTCATCACCGTTATTGATCGCGCGATCATCGAGAAAGCA
GCCAAGGGTGTCCCCATCCGCCAGACCATCACATCCTGCTTCCGATCCAT
GTTCACAAAACCGGGGAGCTTCTTCCTCAGCACCCCATTCCTCCTTATCT
ACACCCTGTACACGTCCACCTACCTCACTGCGAACACCATTGACACCTTC
ACCTCCACCGTGCGCGACAAGCCCTTCTCAACCGTCTTCCCCGGTACCGC
CAAATTCCTCACCACCACCGCAGTGAACATGGGTATTTGCGTATACAAGG
ACGCCAGGTTTGCGCGCATCTTCGCCTCCTGCCACCCCTCCGGCGCCGCC
AAAGTCCCCAAGATCTCCTACGGCCTCTTCTGTCTCCGCGACAGCATCAC
CATCTTTGCCTCCTTCAACATCCCCGCCCTTGTCGCCCCCTCCATCCCCG
ATTCTATCGCCGCCACGCCCGGAATGAAGGCTGCGCTCGCGCAATTCTCC
TGTCCGGCTCTGATGCAGTTCGCTAGCACGCCTATGCATCTGCTCGGATT
GGATCTGTATAACCGGCAACCGCCAGGCGGATTGGGATGGCGTGAGCGCG
CTTCGCGCATCAGACGCGACTACATCCCCAGTTGCTTTGCGCGCATGGGC
AAGATCGTTCCGGCGTATGGTGTGGGTGGTGTGGTGAATGTGCGGATGAG
AGCTTCGCTAATGGAGTATCTGGAGGGCGGGAAGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_19225CAN33_19225Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19225-T1.exon1CAN33_19225-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_19225-T1.exon2CAN33_19225-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_19225-T1.exon3CAN33_19225-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19225-T1.cdsCAN33_19225-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19225-T1CAN33_19225-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
Productputative integral membrane protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1966940..1968003 +
Powered by Drupal