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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:1977164..1979353- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_19245-T1 ID=CAN33_19245-T1|Name=CAN33_19245-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2190bp|location=Sequence derived from alignment at NKJJ01000011.1:1977164..1979353- (Aspergillus niger FDAARGOS_311)
ATGGTGCTCTCCCTATCTGTCCCCAGCTTCTCTAGATCCACCACCTCCTC
TGCGCTTCGTGCCAGTGAAAGCAGCAATTCCACAACCATCAGCGAGGCTC
TCCGCAATAATCCTTTTGGAATAACCTCACGCTCACGCTCCCTCGCCGCC
TCGAATACCACCTCTGAGGAACAGAAACGAGAACAGGAGGAGCTGAATCA
GGCCCTGCAGACCCTAGCTCGAATCTTTCCCGATATTCGCATCGAAGTCT
TCCGAGAACTCCTGGTCCGATTCGATGGGCAGAGCCGTCTCCATGTCTGC
GTCGAGCAGTTGCTACGTCACAAAGAGACGTGGGTAGCCGGGCGGTGGAA
CGTGCCAGCTGGGGTTGGGGGAACGGAAGAAGATGGCAAAAATGATCTAC
GACATACCGGACACGATCAATCAGTTCCGCCTGAGGAGTTGTTCCGGACA
AATGAATATAAGGCTGCCGTGAAGGCGGCTCTCACAAAGGAGTTTAATGG
TCTGAGTAAGAGTACGGTGGAAGCAGTGCTGGCAGAAGTGAATTTCTGTT
ACTTGCGAGCCCGTCCGACTCTGCAAGATCTTTCCCGGAGAACCTGGCGT
GCGACCTTCAACAGCATTCTTCCTTCGTTCAAGCGCAGTAAAGATAAGAA
CGAGCACCCGCTAATCGTGTGGCAGCGTCAACCAGATGGTGACGAGATCC
CGCGGCTGAAAAAGACGGAGTGCCCGGAGTTGGACCGGGAGCTATACCGA
GCCCTGCTGGCACCACTGCTTCGAACCAGACGGGAAGAGAGGCTGGATAG
AGACCAGAAGTTAGCGGAGGAGCTGAACGAAACGGAAGCCAAAGAGGCTG
ATGCTGTGTATGAGTGCGAGTGCTGTTTGGATGATGTGACATTCGAGCAA
ATCTCAACATGCTCGGACAATACGCACATTATCTGCTATGGCTGCATCCG
GCGAACCATCCACGAGGCTCTGTTCGGTCAGGGCTGGGGTAAATCGGTCG
ATGTGGAAAAGTCGACGTTGAAATGCCTGGCGCCGTTCGACCACGACAGC
TGCCCTGGGACCTTGGACCCAGCGATCGTCAAGCAGGCTATCTTGCTTGA
CAAGGCCGGGCTTGAGACATTTACCAAATTCGAGACGCGACTTTCCTCCG
AGGTTCTGCTCAAGTCCCAGCTGAAGCTCATTCGATGTCCCTTTTGTTCG
TATGCCGAAGTTGATCCGGTTTACCACCCGTCTGCTCAAGGCCGTGTGTG
GCGCTTTCGGCGCGACGGGTTTATCTCCACGCTTCTGATCACCATCTTCT
TACTCGACTTGATACCCATACTTATCATTCCTATAGCGATCCTTTATTTT
GTCAACTCTTCTGCTGTCTTTACTATCTTTCAGAACGCCCTTCTCAACCT
CTGCCTCAAAACCCGACCCAAAAAATTCACCTGCGCGCACCCTGCCTGCC
GCCGCGTCAGCTGCATCACCTGCCAGAAGCCATGGCGTGACCCTCACGTG
TGCCATGAGCCGCTCCTCCTCGACCTGCGGGCCACCGTCGAGGCCGCTCG
CACTGCAGCTGTGAAGCGCACCTGTCCGCGCTGCGGCCTCTCATTCGTCA
AGTCTTCTGGCTGTAACAAGCTAACCTGCGTCTGCGGCTACTCCATGTGC
TACCTCTGCCGCAAGGCTCTTGGACCTCCAATCAAGTCCGCAAACCGATT
GGGACGACTTCGACCACGCCGTCGCGCCAACCTCGTCGAGAACGTTGATC
CCGCGGCCGGACCAGACGCCATCAACGATGAACTAGAAGCCGGCAACGAC
GACGAATTCGAAGAAATGGAAGGCTACAAGCACTTCTGCGAGCACTTCCG
CATCGATCCCGGCTCGCGCTGCACGGAATGCAACAAATGCGAGCTCTACC
AAGACGAAGACGAAGAAGCTGTGGCGCGTCGTGCCGGCGAGAAAGCCGAA
CGCGAATGGCACGCTCGTCAAGGCACCGCCGGTGTGGGCATCGGGACTCT
TCGCGTGAATAATGATTTCTCCAAGGCGGAGGGTAAACGTCGCGGCAATG
GTGGGTTGAGTCTTCATCATCAGGGCAAGGGCATGAGCTATTGGCTGGAT
GAGGTGTGGCGGGATGGTCGATGGCGAATAGAGGGACAGACTTTTGTTGA
CTGGGTTGTGGAACGAGTCTTAGTGATTGATGAATTTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:1977164..1979353- >CAN33_19245-T1 ID=CAN33_19245-T1|Name=CAN33_19245-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2190bp|location=Sequence derived from alignment at NKJJ01000011.1:1977164..1979353- (Aspergillus niger FDAARGOS_311)
ATGGTGCTCTCCCTATCTGTCCCCAGCTTCTCTAGATCCACCACCTCCTC
TGCGCTTCGTGCCAGTGAAAGCAGCAATTCCACAACCATCAGCGAGGCTC
TCCGCAATAATCCTTTTGGAATAACCTCACGCTCACGCTCCCTCGCCGCC
TCGAATACCACCTCTGAGGAACAGAAACGAGAACAGGAGGAGCTGAATCA
GGCCCTGCAGACCCTAGCTCGAATCTTTCCCGATATTCGCATCGAAGTCT
TCCGAGAACTCCTGGTCCGATTCGATGGGCAGAGCCGTCTCCATGTCTGC
GTCGAGCAGTTGCTACGTCACAAAGAGACGTGGGTAGCCGGGCGGTGGAA
CGTGCCAGCTGGGGTTGGGGGAACGGAAGAAGATGGCAAAAATGATCTAC
GACATACCGGACACGATCAATCAGTTCCGCCTGAGGAGTTGTTCCGGACA
AATGAATATAAGGCTGCCGTGAAGGCGGCTCTCACAAAGGAGTTTAATGG
TCTGAGTAAGAGTACGGTGGAAGCAGTGCTGGCAGAAGTGAATTTCTGTT
ACTTGCGAGCCCGTCCGACTCTGCAAGATCTTTCCCGGAGAACCTGGCGT
GCGACCTTCAACAGCATTCTTCCTTCGTTCAAGCGCAGTAAAGATAAGAA
CGAGCACCCGCTAATCGTGTGGCAGCGTCAACCAGATGGTGACGAGATCC
CGCGGCTGAAAAAGACGGAGTGCCCGGAGTTGGACCGGGAGCTATACCGA
GCCCTGCTGGCACCACTGCTTCGAACCAGACGGGAAGAGAGGCTGGATAG
AGACCAGAAGTTAGCGGAGGAGCTGAACGAAACGGAAGCCAAAGAGGCTG
ATGCTGTGTATGAGTGCGAGTGCTGTTTGGATGATGTGACATTCGAGCAA
ATCTCAACATGCTCGGACAATACGCACATTATCTGCTATGGCTGCATCCG
GCGAACCATCCACGAGGCTCTGTTCGGTCAGGGCTGGGGTAAATCGGTCG
ATGTGGAAAAGTCGACGTTGAAATGCCTGGCGCCGTTCGACCACGACAGC
TGCCCTGGGACCTTGGACCCAGCGATCGTCAAGCAGGCTATCTTGCTTGA
CAAGGCCGGGCTTGAGACATTTACCAAATTCGAGACGCGACTTTCCTCCG
AGGTTCTGCTCAAGTCCCAGCTGAAGCTCATTCGATGTCCCTTTTGTTCG
TATGCCGAAGTTGATCCGGTTTACCACCCGTCTGCTCAAGGCCGTGTGTG
GCGCTTTCGGCGCGACGGGTTTATCTCCACGCTTCTGATCACCATCTTCT
TACTCGACTTGATACCCATACTTATCATTCCTATAGCGATCCTTTATTTT
GTCAACTCTTCTGCTGTCTTTACTATCTTTCAGAACGCCCTTCTCAACCT
CTGCCTCAAAACCCGACCCAAAAAATTCACCTGCGCGCACCCTGCCTGCC
GCCGCGTCAGCTGCATCACCTGCCAGAAGCCATGGCGTGACCCTCACGTG
TGCCATGAGCCGCTCCTCCTCGACCTGCGGGCCACCGTCGAGGCCGCTCG
CACTGCAGCTGTGAAGCGCACCTGTCCGCGCTGCGGCCTCTCATTCGTCA
AGTCTTCTGGCTGTAACAAGCTAACCTGCGTCTGCGGCTACTCCATGTGC
TACCTCTGCCGCAAGGCTCTTGGACCTCCAATCAAGTCCGCAAACCGATT
GGGACGACTTCGACCACGCCGTCGCGCCAACCTCGTCGAGAACGTTGATC
CCGCGGCCGGACCAGACGCCATCAACGATGAACTAGAAGCCGGCAACGAC
GACGAATTCGAAGAAATGGAAGGCTACAAGCACTTCTGCGAGCACTTCCG
CATCGATCCCGGCTCGCGCTGCACGGAATGCAACAAATGCGAGCTCTACC
AAGACGAAGACGAAGAAGCTGTGGCGCGTCGTGCCGGCGAGAAAGCCGAA
CGCGAATGGCACGCTCGTCAAGGCACCGCCGGTGTGGGCATCGGGACTCT
TCGCGTGAATAATGATTTCTCCAAGGCGGAGGGTAAACGTCGCGGCAATG
GTGGGTTGAGTCTTCATCATCAGGGCAAGGGCATGAGCTATTGGCTGGAT
GAGGTGTGGCGGGATGGTCGATGGCGAATAGAGGGACAGACTTTTGTTGA
CTGGGTTGTGGAACGAGTCTTAGTGATTGATGAATTTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR002867 |
| DBxref | PFAM:PF01485 |
| Product | IBR domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:1977164..1979353 - |
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