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CAN33_19265-T1, CAN33_19265-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_19265-T1
Unique NameCAN33_19265-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:1989097..1989962+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_19265-T1 ID=CAN33_19265-T1|Name=CAN33_19265-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=866bp|location=Sequence derived from alignment at NKJJ01000011.1:1989097..1989962+ (Aspergillus niger FDAARGOS_311)
ATGGCTACTCGTCGAGGAGTTGGACTTGGCGCCTTCGCCAATCGCACTCA
AGCCAGCCAGTCATTTGCGAATCATGGCGCCAATCTACGCTCCTCGCATC
TCTCCTCTTTACAGACGCAACTGTCCGTATTCCAGTCATTACTCCACACC
TTCGCGCTGGAACACAGCTCAACGATCAAATCGAACCCGACGTTTCGAGC
AGAGTTTGCTCGTATGTGCAATGCTATCGGAGTCGATCCCCTCGCAGCCA
GCAATGTCAAAGGCAAGAATGCGCGCAAAGGGTTGGGGGAGATCGGGAGT
TTCTGGACGCAGATCATGGGTGGAGACATGAACGACTTCTACTTTGAAGT
AGCTGTTAGAGTGGTGGAACTTTGTCGAGCTACCAGAAGCGAGAACGGCG
GGTTAATCGGTGTTGAGGAATGTCGGAAACGAGTAGGCAAGGGGAAGGCT
ATTGGTAGTGGACTGGAGGTTACAGAGTACGTACTTACTCTTTGCTCCAT
CTTGTGATTATTGATACAGTATACTAATCTGAGCTACCTTCTGCGACATG
CAGTGACGACGTTCTCCGAGCTGTCAAGAGTCTGGAACCGCTTGGCTCTG
GGTTCTCCATTGTACATGTCGGCAGCAAGCAATATATTCGATCGATTCCC
AAAGAGCTAAACACGGACCAGGCTACTGTGCTCGAGGCAATTCAGGTTCT
TGGCTACGTGAGCATCTCTATGCTTCAAGCGAATTTGAATTGGGAGAAGG
CTCGGGCACAGACTGTCATTGATGATCTGCTGGCGGATGGCCTTGTCTGG
CTAGATGCCCAAGCGGAGGAAAATGAGTATTGGTCACCTCAAAATCTGCT
AGATGACAGTGGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:1989097..1989962+

>CAN33_19265-T1 ID=CAN33_19265-T1|Name=CAN33_19265-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1578bp|location=Sequence derived from alignment at NKJJ01000011.1:1989097..1989962+ (Aspergillus niger FDAARGOS_311)
ATGGCTACTCGTCGAGGAGTTGGACTTGGCGCCTTCGCCAATCGCACTCA
AGCCAGCCAGTCATTTGCGAATCATGGCGCCAATCTACGCTCCTCGCATC
TCTCCTCTTTACAGACGCAACTGTCCGTATTCCAGTCATTACTCCACACC
TTCGCGCTGGAACACAGCTCAACGATCAAATCGAACCCGACGTTTCGAGC
AGAGTTTGCTCGTATGTGCAATGCTATCGGAGTCGATCCCCTCGCAGCCA
GCAATGTCAAAGGCAAGAATGCGCGCAAAGGGTTGGGGGAGATCGGGAGT
TTCTGGACGCAGATCATGGGTGGAGACATGAACGACTTCTACTTTGAAGT
AGCTGTTAGAGTGGTGGAACTTTGTCGAGCTACCAGAAGCGAGAACGGCG
GGTTAATCGGTGTTGAGGAATGTCGGAAACGAGTAGGCAAGGGGAAGGCT
ATTGGTAGTGGACTGGAGGTTACAGATGACGACGTTCTCCGAGCTGTCAA
GAGTCTGGAACCGCTTGGCTCTGGGTTCTCCATTGTACATGTCGGCAGCA
AGCAATATATTCGATCGATTCCCAAAGAGCTAAACACGGACCAGGCTACT
GTGCTCGAGGCAATTCAGGTTCTTGGCTACGTGAGCATCTCTATGCTTCA
AGCGAATTTGAATTGGGAGAAGGCTCGGGCACAGACTGTCATTGATGATC
TGCTGGCGGATGGCCTTGTCTGGCTAGATGCCCAAGCGGAGGAAAATGAG
TATTGGTCACCTCAAAATCTGCTAGATGACAGTGGGTGAATGGCTACTCG
TCGAGGAGTTGGACTTGGCGCCTTCGCCAATCGCACTCAAGCCAGCCAGT
CATTTGCGAATCATGGCGCCAATCTACGCTCCTCGCATCTCTCCTCTTTA
CAGACGCAACTGTCCGTATTCCAGTCATTACTCCACACCTTCGCGCTGGA
ACACAGCTCAACGATCAAATCGAACCCGACGTTTCGAGCAGAGTTTGCTC
GTATGTGCAATGCTATCGGAGTCGATCCCCTCGCAGCCAGCAATGTCAAA
GGCAAGAATGCGCGCAAAGGGTTGGGGGAGATCGGGAGTTTCTGGACGCA
GATCATGGGTGGAGACATGAACGACTTCTACTTTGAAGTAGCTGTTAGAG
TGGTGGAACTTTGTCGAGCTACCAGAAGCGAGAACGGCGGGTTAATCGGT
GTTGAGGAATGTCGGAAACGAGTAGGCAAGGGGAAGGCTATTGGTAGTGG
ACTGGAGGTTACAGATGACGACGTTCTCCGAGCTGTCAAGAGTCTGGAAC
CGCTTGGCTCTGGGTTCTCCATTGTACATGTCGGCAGCAAGCAATATATT
CGATCGATTCCCAAAGAGCTAAACACGGACCAGGCTACTGTGCTCGAGGC
AATTCAGGTTCTTGGCTACGTGAGCATCTCTATGCTTCAAGCGAATTTGA
ATTGGGAGAAGGCTCGGGCACAGACTGTCATTGATGATCTGCTGGCGGAT
GGCCTTGTCTGGCTAGATGCCCAAGCGGAGGAAAATGAGTATTGGTCACC
TCAAAATCTGCTAGATGACAGTGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000814ESCRT II complex
Vocabulary: Biological Process
TermDefinition
GO:0071985multivesicular body sorting pathway
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_19265CAN33_19265Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19265-T1.exon1CAN33_19265-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_19265-T1.exon2CAN33_19265-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19265-T1.cdsCAN33_19265-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19265-T1CAN33_19265-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926477X
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR016689
DBxrefInterPro:IPR040608
DBxrefInterPro:IPR036388
DBxrefPFAM:PF04157
ProductEAP30/Vps36 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:1989097..1989962 +
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