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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:1990618..1993117- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_19270-T1 ID=CAN33_19270-T1|Name=CAN33_19270-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2500bp|location=Sequence derived from alignment at NKJJ01000011.1:1990618..1993117- (Aspergillus niger FDAARGOS_311)
ATGAAGAATGTTTCCGAAAGCGAAGAAAGCGAGGATGAGGAACGAGTAAC
TATCGTCAAGAGTGCCAAGGACAAGCGGTTGGAGGAACTCGAAAACACCG
TCAAGTTGATTGAAAATGCCGAGAAGATCAGCGACTGGGCGGTTATCTCG
ACAGGTGCGTTTGGCCCTGGAATCAAAGAATGGAATTGCGGGACCGGCAG
CGGAGGGAAGGATGGGTTTTTGATACTAACATCCGTTTTATAGAGTTTGA
CAAGCTGAACCGTCAAATCGTCAAGATTGTCCAGTCTGGCCCGACCCCGA
AGATCTACGTCAAGACCGTTGCGGACCTGGAGGATTTCGTCAACGAGACC
ATCTCGAAGCAGAAGTCGAGCAACAAGAAGATGAACGCCAGCAACGCCAA
GGGATTCAACGCCGTTAAGCAGCGTATCAAGAAGAACAACAAGGACTACG
CCGTTCAGATCGACAAGTACAGGAAGGACAAGGATGGCTTCATGGAAGCC
AAGGAGGAAGTGGCCCGTCCCGTCGCCGCCGCCCCTCGCCTGACCAAGAT
TGAGCGTATCGAAGCCCCTGCTCTTTCCACCGCCGGTGATGACGATGGTT
TCGCGACCGTTGGCCGTGGCGGCAAGACCCTCCAGTACACCCCCGAGAGC
ATCCTGAAGCACCTCCGCGTTATCGTCGAATCCCGCGGAAAGAAGAACAC
CGACCGTTTGGAGCAGATCCGCACGATGGAGAAGCTGTTGGAGGTTGCCC
AGACTCCTTACCAGCGTATCCGCATCTACTTGACCATGATCTCCACCCGC
TTCGATCTCACCTCTTCCTCTACCAGCAACTACATGGCCGTCGATCAGTG
GAAGTTCGCCGAGCAGGAGTTCGCTACCCTTCTGTCCGTTCTCGAGAACA
ACCGCACCTATGTCGTGACTGAGGGTGCCGAAGAGTGGGAGGATGATGAG
AAGCAGCCCACACCCGCCCCGGCGAGGTCGTTCACATCCCCGGCAGCATT
GTCTCGTATGTCGAGAGACTGGATGATGAGCTCACCCGTTCCCTGCAGCA
CATTGACCCCCACACTGCCGAGTACATCGACCGTCTGGGTGATGAGAAGC
AGCTGTACGCCAACCTTGTGCGCACCCAGGTCTACGTCGAGGGTCTTACT
CAGTCCGAGAAGACCGATCCCCGTCAGGACAGCCTTAACCGCGTGGTCAT
GAGGAGACTGGAGCACATCTACTTCAAGCCCTCTCAGGTCGTCACGATCC
TGGAGGAAGGTACCTGGAAGGTCCTTCCCTCCGAATTGGAATCCAACGTC
ACTCCCCGTGGCAACACGGGAGATGTGACCAACCTTGTGCAGACCCTTTG
CAGCTACCTGTTCAAGCACAGCGACGGTATCATCCGTGCTCGTGCGATGC
TGTGCCAGATCTACTTCCTTGCTCTGCACGACCAGTACTACCGCTCTCGT
GACCTGATGCTCATGTCCCACCTTACCGAGAACATCGCCAACTTCGACGT
TTCCACCCAGATCCTCTTCAACCGCACCCTTGTTCAGATCGGTCTGTGTG
CCTTCCGGGCCGGCCTGATCTACGAGGCTCAGACCACCCTCTCTGAGGTC
TGCGGCAGTGGACGTCAGAAAGAGCTGTTGGCTCAGGGCATCATCCTCCA
GCGCTACTCCACCGTCTCGCCGGAACAGGAGCGTCTGGAGCGTCAGCGTC
AGCTGCCCTTCCACATGCACATCAACCTGGAGCTTCTCGAGTGCATCTAC
CTGACGTCGAGCATGTTCCTGGAGGTCCCTCTGATGGCTCAGACTTCTTC
CTCCCCCGAGATGAAGCGTCGTGTCATCTCCAAGACCTTCCGTCGTATGC
TGGACTACAACGAGCGCCAGGTCTTCACTGGTCCTGCTGAGAACACCCGT
GACGGTGTCATCATGAGTGCCAAGTTCCTCGCCGCCGGAGACTGGAAGAA
GGCCGCTGAGATGCTCAACTCGATCAAGATCTGGGATCTGATGCCCCAGC
CCGACAAGGTCAAGGAGATGCTGTCCCAGCAGATCCAGGAGGAGGGTCTC
CGCACCTACCTCTTCACCTACGCCCCCTTCTACGACAGCCTCTCCATCTC
CACCCTGGCTACCATGTTCGAGCTCCCCGAGAAGAAGATCGCCGCTATCA
TCAGCCGTATGATCTCTCACGAGGAATTGGCCGCTGCTCTCGACCAGGTC
AACGATGCCATTGTCTTCCGCAAGGGTGTCGAGTTGTCGCGTCTCCAGTC
CCAGATCGTCACCCTCGCCGACAAGTCGATGAACCTTCTGGAGTCCAACG
AAAAGACTCTCGAGCAGCGTACGCAAGGCATGGCCAACGCCTTCCAGCGC
GATCAGGGCGCCGGCGCCCGTGGTGGCCGTGGTCCTCGAGGTGGTGGCCA
AGCCCGTGGTGGTCCCAGATTCCCTGGTGGCCAACAAGGTCGTCGGCCTG
GTGGACAGCAGTTTAGCGGTGGTGCATTGGGCGGGGCGATCAAGGCATAA
back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:1990618..1993117- >CAN33_19270-T1 ID=CAN33_19270-T1|Name=CAN33_19270-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7047bp|location=Sequence derived from alignment at NKJJ01000011.1:1990618..1993117- (Aspergillus niger FDAARGOS_311)
CATTGTCTCGTATGTCGAGAGACTGGATGATGAGCTCACCCGTTCCCTGC
AGCACATTGACCCCCACACTGCCGAGTACATCGACCGTCTGGGTGATGAG
AAGCAGCTGTACGCCAACCTTGTGCGCACCCAGGTCTACGTCGAGGGTCT
TACTCAGTCCGAGAAGACCGATCCCCGTCAGGACAGCCTTAACCGCGTGG
TCATGAGGAGACTGGAGCACATCTACTTCAAGCCCTCTCAGGTCGTCACG
ATCCTGGAGGAAGGTACCTGGAAGGTCCTTCCCTCCGAATTGGAATCCAA
CGTCACTCCCCGTGGCAACACGGGAGATGTGACCAACCTTGTGCAGACCC
TTTGCAGCTACCTGTTCAAGCACAGCGACGGTATCATCCGTGCTCGTGCG
ATGCTGTGCCAGATCTACTTCCTTGCTCTGCACGACCAGTACTACCGCTC
TCGTGACCTGATGCTCATGTCCCACCTTACCGAGAACATCGCCAACTTCG
ACGTTTCCACCCAGATCCTCTTCAACCGCACCCTTGTTCAGATCGGTCTG
TGTGCCTTCCGGGCCGGCCTGATCTACGAGGCTCAGACCACCCTCTCTGA
GGTCTGCGGCAGTGGACGTCAGAAAGAGCTGTTGGCTCAGGGCATCATCC
TCCAGCGCTACTCCACCGTCTCGCCGGAACAGGAGCGTCTGGAGCGTCAG
CGTCAGCTGCCCTTCCACATGCACATCAACCTGGAGCTTCTCGAGTGCAT
CTACCTGACGTCGAGCATGTTCCTGGAGGTCCCTCTGATGGCTCAGACTT
CTTCCTCCCCCGAGATGAAGCGTCGTGTCATCTCCAAGACCTTCCGTCGT
ATGCTGGACTACAACGAGCGCCAGGTCTTCACTGGTCCTGCTGAGAACAC
CCGTGACGGTGTCATCATGAGTGCCAAGTTCCTCGCCGCCGGAGACTGGA
AGAAGGCCGCTGAGATGCTCAACTCGATCAAGATCTGGGATCTGATGCCC
CAGCCCGACAAGGTCAAGGAGATGCTGTCCCAGCAGATCCAGGAGGAGGG
TCTCCGCACCTACCTCTTCACCTACGCCCCCTTCTACGACAGCCTCTCCA
TCTCCACCCTGGCTACCATGTTCGAGCTCCCCGAGAAGAAGATCGCCGCT
ATCATCAGCCGTATGATCTCTCACGAGGAATTGGCCGCTGCTCTCGACCA
GGTCAACGATGCCATTGTCTTCCGCAAGGGTGTCGAGTTGTCGCGTCTCC
AGTCCCAGATCGTCACCCTCGCCGACAAGTCGATGAACCTTCTGGAGTCC
AACGAAAAGACTCTCGAGCAGCGTACGCAAGGCATGGCCAACGCCTTCCA
GCGCGATCAGGGCGCCGGCGCCCGTGGTGGCCGTGGTCCTCGAGGTGGTG
GCCAAGCCCGTGGTGGTCCCAGATTCCCTGGTGGCCAACAAGGTCGTCGG
CCTGGTGGACAGCAGTTTAGCGGTGGTGCATTGGGCGGGGCGATCAAGGC
ATAAAGTTTGACAAGCTGAACCGTCAAATCGTCAAGATTGTCCAGTCTGG
CCCGACCCCGAAGATCTACGTCAAGACCGTTGCGGACCTGGAGGATTTCG
TCAACGAGACCATCTCGAAGCAGAAGTCGAGCAACAAGAAGATGAACGCC
AGCAACGCCAAGGGATTCAACGCCGTTAAGCAGCGTATCAAGAAGAACAA
CAAGGACTACGCCGTTCAGATCGACAAGTACAGGAAGGACAAGGATGGCT
TCATGGAAGCCAAGGAGGAAGTGGCCCGTCCCGTCGCCGCCGCCCCTCGC
CTGACCAAGATTGAGCGTATCGAAGCCCCTGCTCTTTCCACCGCCGGTGA
TGACGATGGTTTCGCGACCGTTGGCCGTGGCGGCAAGACCCTCCAGTACA
CCCCCGAGAGCATCCTGAAGCACCTCCGCGTTATCGTCGAATCCCGCGGA
AAGAAGAACACCGACCGTTTGGAGCAGATCCGCACGATGGAGAAGCTGTT
GGAGGTTGCCCAGACTCCTTACCAGCGTATCCGCATCTACTTGACCATGA
TCTCCACCCGCTTCGATCTCACCTCTTCCTCTACCAGCAACTACATGGCC
GTCGATCAGTGGAAGTTCGCCGAGCAGGAGTTCGCTACCCTTCTGTCCGT
TCTCGAGAACAACCGCACCTATGTCGTGACTGAGGGTGCCGAAGAATGAA
GAATGTTTCCGAAAGCGAAGAAAGCGAGGATGAGGAACGAGTAACTATCG
TCAAGAGTGCCAAGGACAAGCGGTTGGAGGAACTCGAAAACACCGTCAAG
TTGATTGAAAATGCCGAGAAGATCAGCGACTGGGCGGTTATCTCGACAGC
ATTGTCTCGTATGTCGAGAGACTGGATGATGAGCTCACCCGTTCCCTGCA
GCACATTGACCCCCACACTGCCGAGTACATCGACCGTCTGGGTGATGAGA
AGCAGCTGTACGCCAACCTTGTGCGCACCCAGGTCTACGTCGAGGGTCTT
ACTCAGTCCGAGAAGACCGATCCCCGTCAGGACAGCCTTAACCGCGTGGT
CATGAGGAGACTGGAGCACATCTACTTCAAGCCCTCTCAGGTCGTCACGA
TCCTGGAGGAAGGTACCTGGAAGGTCCTTCCCTCCGAATTGGAATCCAAC
GTCACTCCCCGTGGCAACACGGGAGATGTGACCAACCTTGTGCAGACCCT
TTGCAGCTACCTGTTCAAGCACAGCGACGGTATCATCCGTGCTCGTGCGA
TGCTGTGCCAGATCTACTTCCTTGCTCTGCACGACCAGTACTACCGCTCT
CGTGACCTGATGCTCATGTCCCACCTTACCGAGAACATCGCCAACTTCGA
CGTTTCCACCCAGATCCTCTTCAACCGCACCCTTGTTCAGATCGGTCTGT
GTGCCTTCCGGGCCGGCCTGATCTACGAGGCTCAGACCACCCTCTCTGAG
GTCTGCGGCAGTGGACGTCAGAAAGAGCTGTTGGCTCAGGGCATCATCCT
CCAGCGCTACTCCACCGTCTCGCCGGAACAGGAGCGTCTGGAGCGTCAGC
GTCAGCTGCCCTTCCACATGCACATCAACCTGGAGCTTCTCGAGTGCATC
TACCTGACGTCGAGCATGTTCCTGGAGGTCCCTCTGATGGCTCAGACTTC
TTCCTCCCCCGAGATGAAGCGTCGTGTCATCTCCAAGACCTTCCGTCGTA
TGCTGGACTACAACGAGCGCCAGGTCTTCACTGGTCCTGCTGAGAACACC
CGTGACGGTGTCATCATGAGTGCCAAGTTCCTCGCCGCCGGAGACTGGAA
GAAGGCCGCTGAGATGCTCAACTCGATCAAGATCTGGGATCTGATGCCCC
AGCCCGACAAGGTCAAGGAGATGCTGTCCCAGCAGATCCAGGAGGAGGGT
CTCCGCACCTACCTCTTCACCTACGCCCCCTTCTACGACAGCCTCTCCAT
CTCCACCCTGGCTACCATGTTCGAGCTCCCCGAGAAGAAGATCGCCGCTA
TCATCAGCCGTATGATCTCTCACGAGGAATTGGCCGCTGCTCTCGACCAG
GTCAACGATGCCATTGTCTTCCGCAAGGGTGTCGAGTTGTCGCGTCTCCA
GTCCCAGATCGTCACCCTCGCCGACAAGTCGATGAACCTTCTGGAGTCCA
ACGAAAAGACTCTCGAGCAGCGTACGCAAGGCATGGCCAACGCCTTCCAG
CGCGATCAGGGCGCCGGCGCCCGTGGTGGCCGTGGTCCTCGAGGTGGTGG
CCAAGCCCGTGGTGGTCCCAGATTCCCTGGTGGCCAACAAGGTCGTCGGC
CTGGTGGACAGCAGTTTAGCGGTGGTGCATTGGGCGGGGCGATCAAGGCA
TAAAGTTTGACAAGCTGAACCGTCAAATCGTCAAGATTGTCCAGTCTGGC
CCGACCCCGAAGATCTACGTCAAGACCGTTGCGGACCTGGAGGATTTCGT
CAACGAGACCATCTCGAAGCAGAAGTCGAGCAACAAGAAGATGAACGCCA
GCAACGCCAAGGGATTCAACGCCGTTAAGCAGCGTATCAAGAAGAACAAC
AAGGACTACGCCGTTCAGATCGACAAGTACAGGAAGGACAAGGATGGCTT
CATGGAAGCCAAGGAGGAAGTGGCCCGTCCCGTCGCCGCCGCCCCTCGCC
TGACCAAGATTGAGCGTATCGAAGCCCCTGCTCTTTCCACCGCCGGTGAT
GACGATGGTTTCGCGACCGTTGGCCGTGGCGGCAAGACCCTCCAGTACAC
CCCCGAGAGCATCCTGAAGCACCTCCGCGTTATCGTCGAATCCCGCGGAA
AGAAGAACACCGACCGTTTGGAGCAGATCCGCACGATGGAGAAGCTGTTG
GAGGTTGCCCAGACTCCTTACCAGCGTATCCGCATCTACTTGACCATGAT
CTCCACCCGCTTCGATCTCACCTCTTCCTCTACCAGCAACTACATGGCCG
TCGATCAGTGGAAGTTCGCCGAGCAGGAGTTCGCTACCCTTCTGTCCGTT
CTCGAGAACAACCGCACCTATGTCGTGACTGAGGGTGCCGAAGAATGAAG
AATGTTTCCGAAAGCGAAGAAAGCGAGGATGAGGAACGAGTAACTATCGT
CAAGAGTGCCAAGGACAAGCGGTTGGAGGAACTCGAAAACACCGTCAAGT
TGATTGAAAATGCCGAGAAGATCAGCGACTGGGCGGTTATCTCGACAGCA
TTGTCTCGTATGTCGAGAGACTGGATGATGAGCTCACCCGTTCCCTGCAG
CACATTGACCCCCACACTGCCGAGTACATCGACCGTCTGGGTGATGAGAA
GCAGCTGTACGCCAACCTTGTGCGCACCCAGGTCTACGTCGAGGGTCTTA
CTCAGTCCGAGAAGACCGATCCCCGTCAGGACAGCCTTAACCGCGTGGTC
ATGAGGAGACTGGAGCACATCTACTTCAAGCCCTCTCAGGTCGTCACGAT
CCTGGAGGAAGGTACCTGGAAGGTCCTTCCCTCCGAATTGGAATCCAACG
TCACTCCCCGTGGCAACACGGGAGATGTGACCAACCTTGTGCAGACCCTT
TGCAGCTACCTGTTCAAGCACAGCGACGGTATCATCCGTGCTCGTGCGAT
GCTGTGCCAGATCTACTTCCTTGCTCTGCACGACCAGTACTACCGCTCTC
GTGACCTGATGCTCATGTCCCACCTTACCGAGAACATCGCCAACTTCGAC
GTTTCCACCCAGATCCTCTTCAACCGCACCCTTGTTCAGATCGGTCTGTG
TGCCTTCCGGGCCGGCCTGATCTACGAGGCTCAGACCACCCTCTCTGAGG
TCTGCGGCAGTGGACGTCAGAAAGAGCTGTTGGCTCAGGGCATCATCCTC
CAGCGCTACTCCACCGTCTCGCCGGAACAGGAGCGTCTGGAGCGTCAGCG
TCAGCTGCCCTTCCACATGCACATCAACCTGGAGCTTCTCGAGTGCATCT
ACCTGACGTCGAGCATGTTCCTGGAGGTCCCTCTGATGGCTCAGACTTCT
TCCTCCCCCGAGATGAAGCGTCGTGTCATCTCCAAGACCTTCCGTCGTAT
GCTGGACTACAACGAGCGCCAGGTCTTCACTGGTCCTGCTGAGAACACCC
GTGACGGTGTCATCATGAGTGCCAAGTTCCTCGCCGCCGGAGACTGGAAG
AAGGCCGCTGAGATGCTCAACTCGATCAAGATCTGGGATCTGATGCCCCA
GCCCGACAAGGTCAAGGAGATGCTGTCCCAGCAGATCCAGGAGGAGGGTC
TCCGCACCTACCTCTTCACCTACGCCCCCTTCTACGACAGCCTCTCCATC
TCCACCCTGGCTACCATGTTCGAGCTCCCCGAGAAGAAGATCGCCGCTAT
CATCAGCCGTATGATCTCTCACGAGGAATTGGCCGCTGCTCTCGACCAGG
TCAACGATGCCATTGTCTTCCGCAAGGGTGTCGAGTTGTCGCGTCTCCAG
TCCCAGATCGTCACCCTCGCCGACAAGTCGATGAACCTTCTGGAGTCCAA
CGAAAAGACTCTCGAGCAGCGTACGCAAGGCATGGCCAACGCCTTCCAGC
GCGATCAGGGCGCCGGCGCCCGTGGTGGCCGTGGTCCTCGAGGTGGTGGC
CAAGCCCGTGGTGGTCCCAGATTCCCTGGTGGCCAACAAGGTCGTCGGCC
TGGTGGACAGCAGTTTAGCGGTGGTGCATTGGGCGGGGCGATCAAGGCAT
AAAGTTTGACAAGCTGAACCGTCAAATCGTCAAGATTGTCCAGTCTGGCC
CGACCCCGAAGATCTACGTCAAGACCGTTGCGGACCTGGAGGATTTCGTC
AACGAGACCATCTCGAAGCAGAAGTCGAGCAACAAGAAGATGAACGCCAG
CAACGCCAAGGGATTCAACGCCGTTAAGCAGCGTATCAAGAAGAACAACA
AGGACTACGCCGTTCAGATCGACAAGTACAGGAAGGACAAGGATGGCTTC
ATGGAAGCCAAGGAGGAAGTGGCCCGTCCCGTCGCCGCCGCCCCTCGCCT
GACCAAGATTGAGCGTATCGAAGCCCCTGCTCTTTCCACCGCCGGTGATG
ACGATGGTTTCGCGACCGTTGGCCGTGGCGGCAAGACCCTCCAGTACACC
CCCGAGAGCATCCTGAAGCACCTCCGCGTTATCGTCGAATCCCGCGGAAA
GAAGAACACCGACCGTTTGGAGCAGATCCGCACGATGGAGAAGCTGTTGG
AGGTTGCCCAGACTCCTTACCAGCGTATCCGCATCTACTTGACCATGATC
TCCACCCGCTTCGATCTCACCTCTTCCTCTACCAGCAACTACATGGCCGT
CGATCAGTGGAAGTTCGCCGAGCAGGAGTTCGCTACCCTTCTGTCCGTTC
TCGAGAACAACCGCACCTATGTCGTGACTGAGGGTGCCGAAGAATGAAGA
ATGTTTCCGAAAGCGAAGAAAGCGAGGATGAGGAACGAGTAACTATCGTC
AAGAGTGCCAAGGACAAGCGGTTGGAGGAACTCGAAAACACCGTCAAGTT
GATTGAAAATGCCGAGAAGATCAGCGACTGGGCGGTTATCTCGACAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005852 | eukaryotic translation initiation factor 3 complex |
Vocabulary: Biological Process
| Term | Definition |
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| GO:0006413 | translational initiation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0031369 | translation initiation factor binding |
| GO:0003743 | translation initiation factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092616QN |
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR027516 |
| DBxref | InterPro:IPR008905 |
| DBxref | InterPro:IPR036388 |
| DBxref | InterPro:IPR000717 |
| DBxref | PFAM:PF01399 |
| Product | Translation initiation factor 3 subunit c |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:1990618..1993117 - |
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