You are here

CAN33_19285-T1, CAN33_19285-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_19285-T1
Unique NameCAN33_19285-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2005832..2006508+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_19285-T1 ID=CAN33_19285-T1|Name=CAN33_19285-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=677bp|location=Sequence derived from alignment at NKJJ01000011.1:2005832..2006508+ (Aspergillus niger FDAARGOS_311)
ATGAAGTTCCTTGCCTCTCTTGCCCTGTTGGCGTCTACTGTGGTTGCTAG CCCTATGCTGTACCCCCGCCAGTCCAGCAACTCCACCCAGTCCTTCTACC TCAAGACCTCGGGCGCTTCCAACGATAACCACAACAACCTCTACGTTTAT GCCTACCACACCGGTGCGGGATTCAACGATGCCGTGCTGACCTCGGATGT CGGAACGGCCAGCCCGGCCTTCCTCAACGGCACCCACACCCAATTCGACC TGGGAACTTCCTTCCCTTGGGGATTCAAGATGGGCGTCCAGAACAACTAT GCAGGTTAGACTTCCTTGTCCCTTTCCTGATCCATGTTTTTGTCATTCCT TCACCACATGGGCGATCGGAAGATTAACTTTGCTTGCAGCATGGGAGTCT GTCCAGATCAATGTTGGATACGGCGATGATGATTTCTCCATTGGCACTAC CGGTCTGGAGTGGTCGGCACAGGATGGCTTCGGAGGCTGGCTAGGTGAGT GACTGAAAACATATACCCATACGAACATTCTAGAACGTGCCACTAACTGC GGCTATGTATGTAGTGTGCGATTGGTACCACAACGCACCCCAGCTCTTCT ACATCTACCGCTACGAAGAGCCCACTATTCCTTCCTCCTGCAGCACTGTC GACCTGAAGCCCGAATATACTTCCTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:2005832..2006508+

>CAN33_19285-T1 ID=CAN33_19285-T1|Name=CAN33_19285-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1566bp|location=Sequence derived from alignment at NKJJ01000011.1:2005832..2006508+ (Aspergillus niger FDAARGOS_311)
ATGAAGTTCCTTGCCTCTCTTGCCCTGTTGGCGTCTACTGTGGTTGCTAG
CCCTATGCTGTACCCCCGCCAGTCCAGCAACTCCACCCAGTCCTTCTACC
TCAAGACCTCGGGCGCTTCCAACGATAACCACAACAACCTCTACGTTTAT
GCCTACCACACCGGTGCGGGATTCAACGATGCCGTGCTGACCTCGGATGT
CGGAACGGCCAGCCCGGCCTTCCTCAACGGCACCCACACCCAATTCGACC
TGGGAACTTCCTTCCCTTGGGGATTCAAGATGGGCGTCCAGAACAACTAT
GCAGCATGGGAGTCTGTCCAGATCAATGTTGGATACGGCGATGATGATTT
CTCCATTGGCACTACCGGTCTGGAGTGGTCGGCACAGGATGGCTTCGGAG
GCTGGCTAGTGTGCGATTGGTACCACAACGCACCCCAGCTCTTCTACATC
TACCGCTACGAAGAGCCCACTATTCCTTCCTCCTGCAGCACTGTCGACCT
GAAGCCCGAATATACTTCCTAGATGAAGTTCCTTGCCTCTCTTGCCCTGT
TGGCGTCTACTGTGGTTGCTAGCCCTATGCTGTACCCCCGCCAGTCCAGC
AACTCCACCCAGTCCTTCTACCTCAAGACCTCGGGCGCTTCCAACGATAA
CCACAACAACCTCTACGTTTATGCCTACCACACCGGTGCGGGATTCAACG
ATGCCGTGCTGACCTCGGATGTCGGAACGGCCAGCCCGGCCTTCCTCAAC
GGCACCCACACCCAATTCGACCTGGGAACTTCCTTCCCTTGGGGATTCAA
GATGGGCGTCCAGAACAACTATGCAGCATGGGAGTCTGTCCAGATCAATG
TTGGATACGGCGATGATGATTTCTCCATTGGCACTACCGGTCTGGAGTGG
TCGGCACAGGATGGCTTCGGAGGCTGGCTAGTGTGCGATTGGTACCACAA
CGCACCCCAGCTCTTCTACATCTACCGCTACGAAGAGCCCACTATTCCTT
CCTCCTGCAGCACTGTCGACCTGAAGCCCGAATATACTTCCTAGATGAAG
TTCCTTGCCTCTCTTGCCCTGTTGGCGTCTACTGTGGTTGCTAGCCCTAT
GCTGTACCCCCGCCAGTCCAGCAACTCCACCCAGTCCTTCTACCTCAAGA
CCTCGGGCGCTTCCAACGATAACCACAACAACCTCTACGTTTATGCCTAC
CACACCGGTGCGGGATTCAACGATGCCGTGCTGACCTCGGATGTCGGAAC
GGCCAGCCCGGCCTTCCTCAACGGCACCCACACCCAATTCGACCTGGGAA
CTTCCTTCCCTTGGGGATTCAAGATGGGCGTCCAGAACAACTATGCAGCA
TGGGAGTCTGTCCAGATCAATGTTGGATACGGCGATGATGATTTCTCCAT
TGGCACTACCGGTCTGGAGTGGTCGGCACAGGATGGCTTCGGAGGCTGGC
TAGTGTGCGATTGGTACCACAACGCACCCCAGCTCTTCTACATCTACCGC
TACGAAGAGCCCACTATTCCTTCCTCCTGCAGCACTGTCGACCTGAAGCC
CGAATATACTTCCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_19285CAN33_19285Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19285-T1.exon1CAN33_19285-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_19285-T1.exon2CAN33_19285-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_19285-T1.exon3CAN33_19285-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19285-T1.cdsCAN33_19285-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19285-T1CAN33_19285-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-16)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2005832..2006508 +