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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:2010766..2011905- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_19295-T1 ID=CAN33_19295-T1|Name=CAN33_19295-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1140bp|location=Sequence derived from alignment at NKJJ01000011.1:2010766..2011905- (Aspergillus niger FDAARGOS_311)
ATGGCATCCGCTCCCAACCCAGGTCAAACGCTTCCTAGGATGCCAGTGGT
TGTTCCTGCAATGGTTCCTCCCTCGAATGGCGCTGAAGCCTCTACAGGGG
GCGTTAGTAACACTGACCCCAGTCCTGATGCCTGGGACTCCGAAATGCAA
CTAGTTTCCTCGCTCGCGAAACTCCAGAAGATGGAAGCAATGGTGAGTAT
TACCCCCTGAGGTCCAGGCACAAACACCAATTAACATGTCATGACAGATT
CACCAACTGCGGACTCTACTCCCTGAGCGCCTTCTGGAACCCCTGGCACC
CATTGTCAACCCCAAGGCCGCTGCGGGAAGACCCGTCCCCAAGTCCCCGC
AAATGCTGTACGAGCAGCTGGCTCAAGCTGCACGCGCGGGTGTTTCCGAG
CTGCAAGAGTTTCAGTCGATGTGGAGAAGTCCCGAGATGAAAGCGGTCTG
GGATCGCATTGACGCGCAGATTAAAGAAAATGGCGGCGTGATGCTGCAGC
CCACGGGGAAATGGGAGAGAGATTACGATACCATTCTTGCGGATCTTCGC
GAGGAGGAACAGACTCAGAATGAGCAGCAGCAGAAAGCTAATGAGGAGAT
GGAGCGATCGAAGATTCAGGCCACTGAGGGTGGATGGAGAGCGATTGTTG
AGGGCTTTGCTCAAAAGAATGTGCCTGGCGTGCGTGTTTTGGCGAGTCAA
AGTGAAGCGGCTGTCACGGTTGTGCTTGTCAAAGCTGGGATGGTGTTCAG
AATTGAGGCTATTGCTGGTCAGGATGGGAATGGTGTTCCTGACTGGCGGG
TCTTTACTAGGACGCCTGGGGGGCAGACGCCTTCGAAGGTCGAGACGGCG
GTGGCGCAGTGCTTGAATTCAAGGCCTCGACAGTGGGATTTGCTTTATCT
ACTTGTAAGGCCTGGCCCTTCTTCTTACATTGCTGAATATGGTTTATGTG
GACAAAACGCTGACATTTATATTAGGACATGATATCGTCCTACTCATCTA
TCAAACAGACACCCTGTGCAAAATGCACCAAGATGACCGACAGCACAGCA
ACCCTTCCCACCATCCGCAAACCATCCTCTACTCCCCAAGAACAGGGAAG
TCAAACCTGGGAAGCCTACCATCAAGGCTGCACTGAATGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:2010766..2011905- >CAN33_19295-T1 ID=CAN33_19295-T1|Name=CAN33_19295-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3042bp|location=Sequence derived from alignment at NKJJ01000011.1:2010766..2011905- (Aspergillus niger FDAARGOS_311)
GACATGATATCGTCCTACTCATCTATCAAACAGACACCCTGTGCAAAATG
CACCAAGATGACCGACAGCACAGCAACCCTTCCCACCATCCGCAAACCAT
CCTCTACTCCCCAAGAACAGGGAAGTCAAACCTGGGAAGCCTACCATCAA
GGCTGCACTGAATGAATTCACCAACTGCGGACTCTACTCCCTGAGCGCCT
TCTGGAACCCCTGGCACCCATTGTCAACCCCAAGGCCGCTGCGGGAAGAC
CCGTCCCCAAGTCCCCGCAAATGCTGTACGAGCAGCTGGCTCAAGCTGCA
CGCGCGGGTGTTTCCGAGCTGCAAGAGTTTCAGTCGATGTGGAGAAGTCC
CGAGATGAAAGCGGTCTGGGATCGCATTGACGCGCAGATTAAAGAAAATG
GCGGCGTGATGCTGCAGCCCACGGGGAAATGGGAGAGAGATTACGATACC
ATTCTTGCGGATCTTCGCGAGGAGGAACAGACTCAGAATGAGCAGCAGCA
GAAAGCTAATGAGGAGATGGAGCGATCGAAGATTCAGGCCACTGAGGGTG
GATGGAGAGCGATTGTTGAGGGCTTTGCTCAAAAGAATGTGCCTGGCGTG
CGTGTTTTGGCGAGTCAAAGTGAAGCGGCTGTCACGGTTGTGCTTGTCAA
AGCTGGGATGGTGTTCAGAATTGAGGCTATTGCTGGTCAGGATGGGAATG
GTGTTCCTGACTGGCGGGTCTTTACTAGGACGCCTGGGGGGCAGACGCCT
TCGAAGGTCGAGACGGCGGTGGCGCAGTGCTTGAATTCAAGGCCTCGACA
GTGGGATTTGCTTTATCTACTTATGGCATCCGCTCCCAACCCAGGTCAAA
CGCTTCCTAGGATGCCAGTGGTTGTTCCTGCAATGGTTCCTCCCTCGAAT
GGCGCTGAAGCCTCTACAGGGGGCGTTAGTAACACTGACCCCAGTCCTGA
TGCCTGGGACTCCGAAATGCAACTAGTTTCCTCGCTCGCGAAACTCCAGA
AGATGGAAGCAATGGACATGATATCGTCCTACTCATCTATCAAACAGACA
CCCTGTGCAAAATGCACCAAGATGACCGACAGCACAGCAACCCTTCCCAC
CATCCGCAAACCATCCTCTACTCCCCAAGAACAGGGAAGTCAAACCTGGG
AAGCCTACCATCAAGGCTGCACTGAATGAATTCACCAACTGCGGACTCTA
CTCCCTGAGCGCCTTCTGGAACCCCTGGCACCCATTGTCAACCCCAAGGC
CGCTGCGGGAAGACCCGTCCCCAAGTCCCCGCAAATGCTGTACGAGCAGC
TGGCTCAAGCTGCACGCGCGGGTGTTTCCGAGCTGCAAGAGTTTCAGTCG
ATGTGGAGAAGTCCCGAGATGAAAGCGGTCTGGGATCGCATTGACGCGCA
GATTAAAGAAAATGGCGGCGTGATGCTGCAGCCCACGGGGAAATGGGAGA
GAGATTACGATACCATTCTTGCGGATCTTCGCGAGGAGGAACAGACTCAG
AATGAGCAGCAGCAGAAAGCTAATGAGGAGATGGAGCGATCGAAGATTCA
GGCCACTGAGGGTGGATGGAGAGCGATTGTTGAGGGCTTTGCTCAAAAGA
ATGTGCCTGGCGTGCGTGTTTTGGCGAGTCAAAGTGAAGCGGCTGTCACG
GTTGTGCTTGTCAAAGCTGGGATGGTGTTCAGAATTGAGGCTATTGCTGG
TCAGGATGGGAATGGTGTTCCTGACTGGCGGGTCTTTACTAGGACGCCTG
GGGGGCAGACGCCTTCGAAGGTCGAGACGGCGGTGGCGCAGTGCTTGAAT
TCAAGGCCTCGACAGTGGGATTTGCTTTATCTACTTATGGCATCCGCTCC
CAACCCAGGTCAAACGCTTCCTAGGATGCCAGTGGTTGTTCCTGCAATGG
TTCCTCCCTCGAATGGCGCTGAAGCCTCTACAGGGGGCGTTAGTAACACT
GACCCCAGTCCTGATGCCTGGGACTCCGAAATGCAACTAGTTTCCTCGCT
CGCGAAACTCCAGAAGATGGAAGCAATGGACATGATATCGTCCTACTCAT
CTATCAAACAGACACCCTGTGCAAAATGCACCAAGATGACCGACAGCACA
GCAACCCTTCCCACCATCCGCAAACCATCCTCTACTCCCCAAGAACAGGG
AAGTCAAACCTGGGAAGCCTACCATCAAGGCTGCACTGAATGAATTCACC
AACTGCGGACTCTACTCCCTGAGCGCCTTCTGGAACCCCTGGCACCCATT
GTCAACCCCAAGGCCGCTGCGGGAAGACCCGTCCCCAAGTCCCCGCAAAT
GCTGTACGAGCAGCTGGCTCAAGCTGCACGCGCGGGTGTTTCCGAGCTGC
AAGAGTTTCAGTCGATGTGGAGAAGTCCCGAGATGAAAGCGGTCTGGGAT
CGCATTGACGCGCAGATTAAAGAAAATGGCGGCGTGATGCTGCAGCCCAC
GGGGAAATGGGAGAGAGATTACGATACCATTCTTGCGGATCTTCGCGAGG
AGGAACAGACTCAGAATGAGCAGCAGCAGAAAGCTAATGAGGAGATGGAG
CGATCGAAGATTCAGGCCACTGAGGGTGGATGGAGAGCGATTGTTGAGGG
CTTTGCTCAAAAGAATGTGCCTGGCGTGCGTGTTTTGGCGAGTCAAAGTG
AAGCGGCTGTCACGGTTGTGCTTGTCAAAGCTGGGATGGTGTTCAGAATT
GAGGCTATTGCTGGTCAGGATGGGAATGGTGTTCCTGACTGGCGGGTCTT
TACTAGGACGCCTGGGGGGCAGACGCCTTCGAAGGTCGAGACGGCGGTGG
CGCAGTGCTTGAATTCAAGGCCTCGACAGTGGGATTTGCTTTATCTACTT
ATGGCATCCGCTCCCAACCCAGGTCAAACGCTTCCTAGGATGCCAGTGGT
TGTTCCTGCAATGGTTCCTCCCTCGAATGGCGCTGAAGCCTCTACAGGGG
GCGTTAGTAACACTGACCCCAGTCCTGATGCCTGGGACTCCGAAATGCAA
CTAGTTTCCTCGCTCGCGAAACTCCAGAAGATGGAAGCAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR021627 |
| DBxref | PFAM:PF11571 |
| Product | Mediator complex subunit 27 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:2010766..2011905 - |
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