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CAN33_19835-T1, CAN33_19835-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_19835-T1
Unique NameCAN33_19835-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2327699..2328832-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_19835-T1 ID=CAN33_19835-T1|Name=CAN33_19835-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1134bp|location=Sequence derived from alignment at NKJJ01000011.1:2327699..2328832- (Aspergillus niger FDAARGOS_311)
ATGGGGCCGCAACAATGGTTTCGCAAGCGCAATCCCGACAGCCAGACGGC
TCCCATGTATAGGTCGTCGAATAACCAGCTCCCTATGTTGCACCTCGCCG
ACACGACGCGGAACAATTTCATCGCTGCCGTAGGGGAATTTGTGGGAACC
TTTCTGTTCCTCTTCTTCTCCTTCGCCGGGACGCAGGTGTCTAATACCCC
CAAGCCAGCGCCCGGGTCTCCTCCAAACACCTCAAACCTGCTATACTCGT
CGCTATGCTTTGGGTTCTCGTTGATGGTCAATGTGTGGGCATTCTATCGA
GTGACTGGAGGTTTATTTAACCCCGCGGTATGCCCTGCCATTCCAATGTC
GGAATTTGCAATTGATCGTGATGCTAGGTCACTCTGGCCCTGTGTCTGGT
TGGCGGATTATCTCCCATCCGTGGGGTTATTCTTTTCGGAGTTCAGCTCA
TCGCAGGCATTGCCTCTGCCGGTGTCGTGGGTGCTTTGTTCCCAGGCGAC
TTGAATGTCGGCACTCGCTTGGGCGGTGGTGCCTCAATATCACAGGGATT
GTTCATCGAAGTTTTCTTGACGGCTCAGTTAGTGTTTATTATCATCATGC
TGGCTGTTGTGAAACATAAATCCACCTTCCTGGCGCCTGTAGGCATTGGC
CTGGTATTCTTCGTGACTGAGATGGTTGGTAAGTAGATGTCTTCCACCCG
ACTGCTGCGAGATATTGTGCGACTAACCTCATCCTCTTCCAGGGGACTAC
TATACTGGCGGCTCACTCAACCCGGCGCGATCACTCGGTCCTGACGTCAT
CAACCGCAGTTTCCCCGGGTACCACTGGATCTACTGGGTCGGTCCGTTGC
TGGGAAGTCTCCTCGCATGTGGCTTCTTCACCTTCCTCAAGATGTTCCAG
TACACCACCGTCAACCCCGGTCAGGACTACAATGAATGGGAAGCCAAGAT
GGGCTCGGGAGGTCCCGGATCGTGGGACATGTCGATGCACCGTCCCTCAT
ATAACTCCGAAGCCACTACGGTCGAGCAGCCGCAATCCCCATCAGCCGGC
AGGAGGAACCACACCCCGACCAACTCTCAGCCGCAGAATAACCCTAATAT
TCCTAATATCCCTCACGGGGCAGAGCAGGTGTAG
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Coding sequence (CDS) from alignment at NKJJ01000011.1:2327699..2328832-

>CAN33_19835-T1 ID=CAN33_19835-T1|Name=CAN33_19835-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3060bp|location=Sequence derived from alignment at NKJJ01000011.1:2327699..2328832- (Aspergillus niger FDAARGOS_311)
GGGACTACTATACTGGCGGCTCACTCAACCCGGCGCGATCACTCGGTCCT
GACGTCATCAACCGCAGTTTCCCCGGGTACCACTGGATCTACTGGGTCGG
TCCGTTGCTGGGAAGTCTCCTCGCATGTGGCTTCTTCACCTTCCTCAAGA
TGTTCCAGTACACCACCGTCAACCCCGGTCAGGACTACAATGAATGGGAA
GCCAAGATGGGCTCGGGAGGTCCCGGATCGTGGGACATGTCGATGCACCG
TCCCTCATATAACTCCGAAGCCACTACGGTCGAGCAGCCGCAATCCCCAT
CAGCCGGCAGGAGGAACCACACCCCGACCAACTCTCAGCCGCAGAATAAC
CCTAATATTCCTAATATCCCTCACGGGGCAGAGCAGGTGTAGGTCACTCT
GGCCCTGTGTCTGGTTGGCGGATTATCTCCCATCCGTGGGGTTATTCTTT
TCGGAGTTCAGCTCATCGCAGGCATTGCCTCTGCCGGTGTCGTGGGTGCT
TTGTTCCCAGGCGACTTGAATGTCGGCACTCGCTTGGGCGGTGGTGCCTC
AATATCACAGGGATTGTTCATCGAAGTTTTCTTGACGGCTCAGTTAGTGT
TTATTATCATCATGCTGGCTGTTGTGAAACATAAATCCACCTTCCTGGCG
CCTGTAGGCATTGGCCTGGTATTCTTCGTGACTGAGATGGTTGATGGGGC
CGCAACAATGGTTTCGCAAGCGCAATCCCGACAGCCAGACGGCTCCCATG
TATAGGTCGTCGAATAACCAGCTCCCTATGTTGCACCTCGCCGACACGAC
GCGGAACAATTTCATCGCTGCCGTAGGGGAATTTGTGGGAACCTTTCTGT
TCCTCTTCTTCTCCTTCGCCGGGACGCAGGTGTCTAATACCCCCAAGCCA
GCGCCCGGGTCTCCTCCAAACACCTCAAACCTGCTATACTCGTCGCTATG
CTTTGGGTTCTCGTTGATGGTCAATGTGTGGGCATTCTATCGAGTGACTG
GAGGTTTATTTAACCCCGCGGGGACTACTATACTGGCGGCTCACTCAACC
CGGCGCGATCACTCGGTCCTGACGTCATCAACCGCAGTTTCCCCGGGTAC
CACTGGATCTACTGGGTCGGTCCGTTGCTGGGAAGTCTCCTCGCATGTGG
CTTCTTCACCTTCCTCAAGATGTTCCAGTACACCACCGTCAACCCCGGTC
AGGACTACAATGAATGGGAAGCCAAGATGGGCTCGGGAGGTCCCGGATCG
TGGGACATGTCGATGCACCGTCCCTCATATAACTCCGAAGCCACTACGGT
CGAGCAGCCGCAATCCCCATCAGCCGGCAGGAGGAACCACACCCCGACCA
ACTCTCAGCCGCAGAATAACCCTAATATTCCTAATATCCCTCACGGGGCA
GAGCAGGTGTAGGTCACTCTGGCCCTGTGTCTGGTTGGCGGATTATCTCC
CATCCGTGGGGTTATTCTTTTCGGAGTTCAGCTCATCGCAGGCATTGCCT
CTGCCGGTGTCGTGGGTGCTTTGTTCCCAGGCGACTTGAATGTCGGCACT
CGCTTGGGCGGTGGTGCCTCAATATCACAGGGATTGTTCATCGAAGTTTT
CTTGACGGCTCAGTTAGTGTTTATTATCATCATGCTGGCTGTTGTGAAAC
ATAAATCCACCTTCCTGGCGCCTGTAGGCATTGGCCTGGTATTCTTCGTG
ACTGAGATGGTTGATGGGGCCGCAACAATGGTTTCGCAAGCGCAATCCCG
ACAGCCAGACGGCTCCCATGTATAGGTCGTCGAATAACCAGCTCCCTATG
TTGCACCTCGCCGACACGACGCGGAACAATTTCATCGCTGCCGTAGGGGA
ATTTGTGGGAACCTTTCTGTTCCTCTTCTTCTCCTTCGCCGGGACGCAGG
TGTCTAATACCCCCAAGCCAGCGCCCGGGTCTCCTCCAAACACCTCAAAC
CTGCTATACTCGTCGCTATGCTTTGGGTTCTCGTTGATGGTCAATGTGTG
GGCATTCTATCGAGTGACTGGAGGTTTATTTAACCCCGCGGGGACTACTA
TACTGGCGGCTCACTCAACCCGGCGCGATCACTCGGTCCTGACGTCATCA
ACCGCAGTTTCCCCGGGTACCACTGGATCTACTGGGTCGGTCCGTTGCTG
GGAAGTCTCCTCGCATGTGGCTTCTTCACCTTCCTCAAGATGTTCCAGTA
CACCACCGTCAACCCCGGTCAGGACTACAATGAATGGGAAGCCAAGATGG
GCTCGGGAGGTCCCGGATCGTGGGACATGTCGATGCACCGTCCCTCATAT
AACTCCGAAGCCACTACGGTCGAGCAGCCGCAATCCCCATCAGCCGGCAG
GAGGAACCACACCCCGACCAACTCTCAGCCGCAGAATAACCCTAATATTC
CTAATATCCCTCACGGGGCAGAGCAGGTGTAGGTCACTCTGGCCCTGTGT
CTGGTTGGCGGATTATCTCCCATCCGTGGGGTTATTCTTTTCGGAGTTCA
GCTCATCGCAGGCATTGCCTCTGCCGGTGTCGTGGGTGCTTTGTTCCCAG
GCGACTTGAATGTCGGCACTCGCTTGGGCGGTGGTGCCTCAATATCACAG
GGATTGTTCATCGAAGTTTTCTTGACGGCTCAGTTAGTGTTTATTATCAT
CATGCTGGCTGTTGTGAAACATAAATCCACCTTCCTGGCGCCTGTAGGCA
TTGGCCTGGTATTCTTCGTGACTGAGATGGTTGATGGGGCCGCAACAATG
GTTTCGCAAGCGCAATCCCGACAGCCAGACGGCTCCCATGTATAGGTCGT
CGAATAACCAGCTCCCTATGTTGCACCTCGCCGACACGACGCGGAACAAT
TTCATCGCTGCCGTAGGGGAATTTGTGGGAACCTTTCTGTTCCTCTTCTT
CTCCTTCGCCGGGACGCAGGTGTCTAATACCCCCAAGCCAGCGCCCGGGT
CTCCTCCAAACACCTCAAACCTGCTATACTCGTCGCTATGCTTTGGGTTC
TCGTTGATGGTCAATGTGTGGGCATTCTATCGAGTGACTGGAGGTTTATT
TAACCCCGCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0015267channel activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_19835CAN33_19835Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19835-T1CAN33_19835-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19835-T1.cdsCAN33_19835-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19835-T1.exon3CAN33_19835-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_19835-T1.exon2CAN33_19835-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_19835-T1.exon1CAN33_19835-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR023271
DBxrefInterPro:IPR000425
DBxrefPFAM:PF00230
ProductMajor intrinsic protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2327699..2328832 -
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