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CAN33_19865-T1, CAN33_19865-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_19865-T1
Unique NameCAN33_19865-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2350598..2351608-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_19865-T1 ID=CAN33_19865-T1|Name=CAN33_19865-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1011bp|location=Sequence derived from alignment at NKJJ01000011.1:2350598..2351608- (Aspergillus niger FDAARGOS_311)
ATGGCATACCCCAGGCCCGATTCCTTCTCGCTCGACGACGAGCGGATGTA
CAGCATGAGCCATCCGAGCCCACTCACTCGTCCCAACGATACCTTCGCCA
AGGGTCCCGATCCTCTGTCGGCTAACTGGAGCTACGACAATGCCATCGAT
CTCTTCTCCCTCAACACCATGATGCCGGAGACTTTCCCCTTGGAGATGTC
CAACGAGATGATGAACTTGGACCCTAAGGACTTTCCCGCCGACTTCTTCG
CCCCACCCCCAGATATCAGTGCGTTCACCATCTCCAACCACTCGGGTGAG
GATGCTGCCTCCTGCGGCTCTCTCTCTTCGGTATGTCTATACCCCATTGA
CTTTGAATGATGAACTATAACTAACATTACACTCAATCAGGACCTGGACA
GTGACGACCAATCATGGTCTCCCACCTGCCGTGTCTCTCCCCTTGAGCCT
ATCCACATGGAGCTGCCCAAGCCTGCTGCTCGCACTTCCAAAACATCTAC
CCGTCGCAAGACTGCGTCTCAACCGAAGCCCCGCGAGGTTACGGCGACAA
GGTGGTCGTCCAGTCCGGAAATTACACCGCAGGACTACCCCGCCACCAGT
GTCTCACCCCCGCCCGCCCCCTCCTCCCCTGCCGCCAACAACACCGCCCG
CAAGACCACCCGTAGTCTCTCCAGCGACTCCAACGCCAGCACGGGTCAGG
CCCAGACCACCACCGGCCGCAATGCGGCGAAGCGGGCGGCGCACAACATC
ATCGAGAAGCGGTACCGCACGAACATGAACGCCAAGTTCGTTGCCTTGGA
GAAGGCGATGTGCGGCGGAGTCCAGAAGCCCACCAAGGGGGGCTCGGCGT
CGCTGAAGAAGTCGGAGATCCTGACCAATGCCATCACCTTCATGCAAGAA
TTGCAGGAGGAAAACAAGGTGCTCCAGAAGGAGCTTGCCATGCTCAAACA
AAGCATGGTCCCGAACGGGATGTGGCGACATAGCAAGGGGAGTGAGGCGT
TTCACGCTTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:2350598..2351608-

>CAN33_19865-T1 ID=CAN33_19865-T1|Name=CAN33_19865-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1902bp|location=Sequence derived from alignment at NKJJ01000011.1:2350598..2351608- (Aspergillus niger FDAARGOS_311)
GACCTGGACAGTGACGACCAATCATGGTCTCCCACCTGCCGTGTCTCTCC
CCTTGAGCCTATCCACATGGAGCTGCCCAAGCCTGCTGCTCGCACTTCCA
AAACATCTACCCGTCGCAAGACTGCGTCTCAACCGAAGCCCCGCGAGGTT
ACGGCGACAAGGTGGTCGTCCAGTCCGGAAATTACACCGCAGGACTACCC
CGCCACCAGTGTCTCACCCCCGCCCGCCCCCTCCTCCCCTGCCGCCAACA
ACACCGCCCGCAAGACCACCCGTAGTCTCTCCAGCGACTCCAACGCCAGC
ACGGGTCAGGCCCAGACCACCACCGGCCGCAATGCGGCGAAGCGGGCGGC
GCACAACATCATCGAGAAGCGGTACCGCACGAACATGAACGCCAAGTTCG
TTGCCTTGGAGAAGGCGATGTGCGGCGGAGTCCAGAAGCCCACCAAGGGG
GGCTCGGCGTCGCTGAAGAAGTCGGAGATCCTGACCAATGCCATCACCTT
CATGCAAGAATTGCAGGAGGAAAACAAGGTGCTCCAGAAGGAGCTTGCCA
TGCTCAAACAAAGCATGGTCCCGAACGGGATGTGGCGACATAGCAAGGGG
AGTGAGGCGTTTCACGCTTAAATGGCATACCCCAGGCCCGATTCCTTCTC
GCTCGACGACGAGCGGATGTACAGCATGAGCCATCCGAGCCCACTCACTC
GTCCCAACGATACCTTCGCCAAGGGTCCCGATCCTCTGTCGGCTAACTGG
AGCTACGACAATGCCATCGATCTCTTCTCCCTCAACACCATGATGCCGGA
GACTTTCCCCTTGGAGATGTCCAACGAGATGATGAACTTGGACCCTAAGG
ACTTTCCCGCCGACTTCTTCGCCCCACCCCCAGATATCAGTGCGTTCACC
ATCTCCAACCACTCGGGTGAGGATGCTGCCTCCTGCGGCTCTCTCTCTTC
GGACCTGGACAGTGACGACCAATCATGGTCTCCCACCTGCCGTGTCTCTC
CCCTTGAGCCTATCCACATGGAGCTGCCCAAGCCTGCTGCTCGCACTTCC
AAAACATCTACCCGTCGCAAGACTGCGTCTCAACCGAAGCCCCGCGAGGT
TACGGCGACAAGGTGGTCGTCCAGTCCGGAAATTACACCGCAGGACTACC
CCGCCACCAGTGTCTCACCCCCGCCCGCCCCCTCCTCCCCTGCCGCCAAC
AACACCGCCCGCAAGACCACCCGTAGTCTCTCCAGCGACTCCAACGCCAG
CACGGGTCAGGCCCAGACCACCACCGGCCGCAATGCGGCGAAGCGGGCGG
CGCACAACATCATCGAGAAGCGGTACCGCACGAACATGAACGCCAAGTTC
GTTGCCTTGGAGAAGGCGATGTGCGGCGGAGTCCAGAAGCCCACCAAGGG
GGGCTCGGCGTCGCTGAAGAAGTCGGAGATCCTGACCAATGCCATCACCT
TCATGCAAGAATTGCAGGAGGAAAACAAGGTGCTCCAGAAGGAGCTTGCC
ATGCTCAAACAAAGCATGGTCCCGAACGGGATGTGGCGACATAGCAAGGG
GAGTGAGGCGTTTCACGCTTAAATGGCATACCCCAGGCCCGATTCCTTCT
CGCTCGACGACGAGCGGATGTACAGCATGAGCCATCCGAGCCCACTCACT
CGTCCCAACGATACCTTCGCCAAGGGTCCCGATCCTCTGTCGGCTAACTG
GAGCTACGACAATGCCATCGATCTCTTCTCCCTCAACACCATGATGCCGG
AGACTTTCCCCTTGGAGATGTCCAACGAGATGATGAACTTGGACCCTAAG
GACTTTCCCGCCGACTTCTTCGCCCCACCCCCAGATATCAGTGCGTTCAC
CATCTCCAACCACTCGGGTGAGGATGCTGCCTCCTGCGGCTCTCTCTCTT
CG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_19865CAN33_19865Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19865-T1CAN33_19865-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19865-T1.cdsCAN33_19865-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19865-T1.exon2CAN33_19865-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_19865-T1.exon1CAN33_19865-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036638
DBxrefInterPro:IPR011598
DBxrefPFAM:PF00010
ProductHelix-loop-helix DNA-binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2350598..2351608 -
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