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CAN33_19915-T1, CAN33_19915-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_19915-T1
Unique NameCAN33_19915-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2377925..2379178-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_19915-T1 ID=CAN33_19915-T1|Name=CAN33_19915-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1254bp|location=Sequence derived from alignment at NKJJ01000011.1:2377925..2379178- (Aspergillus niger FDAARGOS_311)
ATGCGTCAAGCTCAGTCTGCTTCTCTCCTCGCGGCCCTTCTGTCGGCCAC
CCAGGTCGCTGCCCACGGTCACGTCACTAACCTCGTCGTCGACGGTGTCT
ACTACGAGGGCTTCGACATCAGCGTCTTCCCTTACGAGTCCGACCCCCCG
AAGGTCGCCGCCTGGACGACCCCCAACACCGGTAACGGCTTCATCTCGCC
CGACGAGTACCGCAACCCCAACATCATCTGTCACGAGAACGCCACCAACG
CCCAGGCCCACGTTGTCGTCGGTGCCGGTGAGAAGATCAACATCCAGTGG
ACTGCCTGGCCCGACTCCCACCACGGTCCCGTCCTGGACTACCTGGCTCG
TTGTGACGGCAGCTGCGAGACCGTCGACAAAACCGACCTGGAGTTCTTCA
AGATCGACGGCGTCGGTCTCGTCAGCGACACCGAGGTCCCCGGTACCTGG
GGTACCGACCAGCTGATCAACAACAACAACAGCTGGATGGTCGAGATCCC
TCCCTCCATTGCCGCTGGTAACTACGTCCTCCGTCACGAGCTCATCGCTC
TCCACGGCGCTGAGGAGCAGGACGGCGCCCAGAACTACCCCCAGTGCTTC
AACCTCCAGGTCACCGGTACCGGTACCGCCACTCCCTCCGGTGTCAAGGG
TACCGAGCTCTACACTGCCACTGAGGGCGGTATCCTCGTCAACATCTACT
CCTCCCTGAGCACTTACACTATGCCCGGCCCTACTGCCTACAGCGGCGAT
GTCTCCATCACTCAGACTACTTCCGCTGTCACTTCCACCGGCACCGCCGT
GGTTGGCAGTGCTAGCGCCGTCGCTTCCGCTTCCTCGACCGCTGCCGCCG
CTACCAGCGCTGCTGCCGTGACCAGCGCTGCTGCCGTGACCAGCGTTGAC
ACCAACACCCAGATCGCTCAGTCCAGCAGTGCCCCTGCCCCTGCTGCCCC
TAGCTCCAGCTCCTCCGCCTACACTCAGATCCCCGTGCAGGTCCCCTCTT
CTTGGACTACCCTGTTGACCTTCACCAACACTCCCCAGGCTGTGCAGCCT
ACTACCTCGGTCCAGCCCGAGCCTGCTCAGTCGACTATCACCCCTGCTCC
GGCTGTTAGCTCTGCTGCCTCCGGTAGCTCCGGTAGCCAGTCTCTGTACG
GCCAGTGCGGTGGTATCAACTGGACTGGTGCTACTCAGTGCGCGAGCGGA
TCTAGCTGCCACTCGTACAACCCTTACTACTACCAGTGCATTGCTAGTGC
TTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:2377925..2379178-

>CAN33_19915-T1 ID=CAN33_19915-T1|Name=CAN33_19915-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2316bp|location=Sequence derived from alignment at NKJJ01000011.1:2377925..2379178- (Aspergillus niger FDAARGOS_311)
GTCCCCTCTTCTTGGACTACCCTGTTGACCTTCACCAACACTCCCCAGGC
TGTGCAGCCTACTACCTCGGTCCAGCCCGAGCCTGCTCAGTCGACTATCA
CCCCTGCTCCGGCTGTTAGCTCTGCTGCCTCCGGTAGCTCCGGTAGCCAG
TCTCTGTACGGCCAGTGCGGTGGTATCAACTGGACTGGTGCTACTCAGTG
CGCGAGCGGATCTAGCTGCCACTCGTACAACCCTTACTACTACCAGTGCA
TTGCTAGTGCTTAAATGCGTCAAGCTCAGTCTGCTTCTCTCCTCGCGGCC
CTTCTGTCGGCCACCCAGGTCGCTGCCCACGGTCACGTCACTAACCTCGT
CGTCGACGGTGTCTACTACGAGGGCTTCGACATCAGCGTCTTCCCTTACG
AGTCCGACCCCCCGAAGGTCGCCGCCTGGACGACCCCCAACACCGGTAAC
GGCTTCATCTCGCCCGACGAGTACCGCAACCCCAACATCATCTGTCACGA
GAACGCCACCAACGCCCAGGCCCACGTTGTCGTCGGTGCCGGTGAGAAGA
TCAACATCCAGTGGACTGCCTGGCCCGACTCCCACCACGGTCCCGTCCTG
GACTACCTGGCTCGTTGTGACGGCAGCTGCGAGACCGTCGACAAAACCGA
CCTGGAGTTCTTCAAGATCGACGGCGTCGGTCTCGTCAGCGACACCGAGG
TCCCCGGTACCTGGGGTACCGACCAGCTGATCAACAACAACAACAGCTGG
ATGGTCGAGATCCCTCCCTCCATTGCCGCTGGTAACTACGTCCTCCGTCA
CGAGCTCATCGCTCTCCACGGCGCTGAGGAGCAGGACGGCGCCCAGAACT
ACCCCCAGTGCTTCAACCTCCAGGTCACCGGTACCGGTACCGCCACTCCC
TCCGGTGTCAAGGGTACCGAGCTCTACACTGCCACTGAGGGCGGTATCCT
CGTCAACATCTACTCCTCCCTGAGCACTTACACTATGCCCGGCCCTACTG
CCTACAGCGGCGATGTCTCCATCACTCAGACTACTTCCGCTGTCACTTCC
ACCGGCACCGCCGTGGTTGGCAGTGCTAGCGCCGTCGCTTCCGCTTCCTC
GACCGCTGCCGCCGCTACCAGCGCTGCTGCCGTGACCAGCGCTGCTGCCG
TGACCAGCGTCCCCTCTTCTTGGACTACCCTGTTGACCTTCACCAACACT
CCCCAGGCTGTGCAGCCTACTACCTCGGTCCAGCCCGAGCCTGCTCAGTC
GACTATCACCCCTGCTCCGGCTGTTAGCTCTGCTGCCTCCGGTAGCTCCG
GTAGCCAGTCTCTGTACGGCCAGTGCGGTGGTATCAACTGGACTGGTGCT
ACTCAGTGCGCGAGCGGATCTAGCTGCCACTCGTACAACCCTTACTACTA
CCAGTGCATTGCTAGTGCTTAAATGCGTCAAGCTCAGTCTGCTTCTCTCC
TCGCGGCCCTTCTGTCGGCCACCCAGGTCGCTGCCCACGGTCACGTCACT
AACCTCGTCGTCGACGGTGTCTACTACGAGGGCTTCGACATCAGCGTCTT
CCCTTACGAGTCCGACCCCCCGAAGGTCGCCGCCTGGACGACCCCCAACA
CCGGTAACGGCTTCATCTCGCCCGACGAGTACCGCAACCCCAACATCATC
TGTCACGAGAACGCCACCAACGCCCAGGCCCACGTTGTCGTCGGTGCCGG
TGAGAAGATCAACATCCAGTGGACTGCCTGGCCCGACTCCCACCACGGTC
CCGTCCTGGACTACCTGGCTCGTTGTGACGGCAGCTGCGAGACCGTCGAC
AAAACCGACCTGGAGTTCTTCAAGATCGACGGCGTCGGTCTCGTCAGCGA
CACCGAGGTCCCCGGTACCTGGGGTACCGACCAGCTGATCAACAACAACA
ACAGCTGGATGGTCGAGATCCCTCCCTCCATTGCCGCTGGTAACTACGTC
CTCCGTCACGAGCTCATCGCTCTCCACGGCGCTGAGGAGCAGGACGGCGC
CCAGAACTACCCCCAGTGCTTCAACCTCCAGGTCACCGGTACCGGTACCG
CCACTCCCTCCGGTGTCAAGGGTACCGAGCTCTACACTGCCACTGAGGGC
GGTATCCTCGTCAACATCTACTCCTCCCTGAGCACTTACACTATGCCCGG
CCCTACTGCCTACAGCGGCGATGTCTCCATCACTCAGACTACTTCCGCTG
TCACTTCCACCGGCACCGCCGTGGTTGGCAGTGCTAGCGCCGTCGCTTCC
GCTTCCTCGACCGCTGCCGCCGCTACCAGCGCTGCTGCCGTGACCAGCGC
TGCTGCCGTGACCAGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030248cellulose binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_19915CAN33_19915Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19915-T1CAN33_19915-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19915-T1.cdsCAN33_19915-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_19915-T1.exon2CAN33_19915-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_19915-T1.exon1CAN33_19915-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteCAZy:AA9
DBxrefInterPro:IPR035971
DBxrefInterPro:IPR005103
DBxrefInterPro:IPR000254
DBxrefPFAM:PF03443
DBxrefPFAM:PF00734
ProductGlycosyl hydrolase family 61 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2377925..2379178 -
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