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CAN33_2000-T1, CAN33_2000-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2000-T1
Unique NameCAN33_2000-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1222142..1222725+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2000-T1 ID=CAN33_2000-T1|Name=CAN33_2000-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=584bp|location=Sequence derived from alignment at NKJJ01000004.1:1222142..1222725+ (Aspergillus niger FDAARGOS_311)
ATGCCCGGCCTAACCCCCTCCCAACTCGCCACCTTCAACTCAACCGGCTA
CCTCATCATCCCAGACTACCTAACACCCTCAGAAATAACCTCCTGCCTGA
CCGAGACCAACAACCTCCTAACCACCTTCCCCCTCGACACCCACCCGCTC
ACCCAATTCACCACCGGCGACTCCTCCCCCACAGACAAACATGTCGGCGA
CACCTACTTCCTGGAATCCGGCGACAAAGTGCGCTTCTTCTTCGAGCCGT
CCGCCATCGACTCCACCACCTCCCGCCTCCTCAAACCCAAGCACGAGGCC
GTGAACAAAATCGGGCACAGCTTGCACACCCTCTCCGAGCCATTCAAATC
CATTACTCTCTCTGAAAGAAATGCCGAGATCGCCAAGTCGTTGGGCTTCA
AGGATCCAAGGGTCTTGCAAAGCATGGTGATTTGCAAGCAACCCGGGATC
GGGGGCGCCGTGCCCCCTCACCGCGACAGCGAGTTCTTGTATACGGATCC
GCCGAGTGCCGTGGGGTGGTGGATTGCGTTGCAGGATGCCGGGAAGGGGA
ATGCGAGTTTGGGGATGGTGAAGGGGAGTCATAA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:1222142..1222725+

>CAN33_2000-T1 ID=CAN33_2000-T1|Name=CAN33_2000-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1062bp|location=Sequence derived from alignment at NKJJ01000004.1:1222142..1222725+ (Aspergillus niger FDAARGOS_311)
ATGCCCGGCCTAACCCCCTCCCAACTCGCCACCTTCAACTCAACCGGCTA
CCTCATCATCCCAGACTACCTAACACCCTCAGAAATAACCTCCTGCCTGA
CCGAGACCAACAACCTCCTAACCACCTTCCCCCTCGACACCCACCCGCTC
ACCCAATTCACCACCGGCGACTCCTCCCCCACAGACAAACATGTCGGCGA
CACCTACTTCCTGGAATCCGGCGACAAAGTGCGCTTCTTCTTCGAGCCGT
CCGCCATCGACTCCACCACCTCCCGCCTCCTCAAACCCAAGCACGAGGCC
GTGAACAAAATCGGGCACAGCTTGCACACCCTCTCCGAGCCATTCAAATC
CATTACTCTCTCTGAAAGAAATGCCGAGATCGCCAAGTCGTTGGGCTTCA
AGGATCCAAGGGTCTTGCAAAGCATGCGAGTTCTTGTATACGGATCCGCC
GAGTGCCGTGGGGTGGTGGATTGCGTTGCAGGATGCCGGGAAGGGGAATG
CGAGTTTGGGGATGGTGAAGGGGAGTCATAAATGCCCGGCCTAACCCCCT
CCCAACTCGCCACCTTCAACTCAACCGGCTACCTCATCATCCCAGACTAC
CTAACACCCTCAGAAATAACCTCCTGCCTGACCGAGACCAACAACCTCCT
AACCACCTTCCCCCTCGACACCCACCCGCTCACCCAATTCACCACCGGCG
ACTCCTCCCCCACAGACAAACATGTCGGCGACACCTACTTCCTGGAATCC
GGCGACAAAGTGCGCTTCTTCTTCGAGCCGTCCGCCATCGACTCCACCAC
CTCCCGCCTCCTCAAACCCAAGCACGAGGCCGTGAACAAAATCGGGCACA
GCTTGCACACCCTCTCCGAGCCATTCAAATCCATTACTCTCTCTGAAAGA
AATGCCGAGATCGCCAAGTCGTTGGGCTTCAAGGATCCAAGGGTCTTGCA
AAGCATGCGAGTTCTTGTATACGGATCCGCCGAGTGCCGTGGGGTGGTGG
ATTGCGTTGCAGGATGCCGGGAAGGGGAATGCGAGTTTGGGGATGGTGAA
GGGGAGTCATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_2000CAN33_2000Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2000-T1.exon1CAN33_2000-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_2000-T1.exon2CAN33_2000-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2000-T1.cdsCAN33_2000-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2000-T1CAN33_2000-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR008775
DBxrefPFAM:PF05721
ProductPhytanoyl-CoA dioxygenase (PhyH) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1222142..1222725 +
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