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CAN33_2005-T1, CAN33_2005-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2005-T1
Unique NameCAN33_2005-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1223214..1224838-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2005-T1 ID=CAN33_2005-T1|Name=CAN33_2005-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1625bp|location=Sequence derived from alignment at NKJJ01000004.1:1223214..1224838- (Aspergillus niger FDAARGOS_311)
ATGGCTGCCCCCGTCCTCCCTCTGCAGCAGGTCAAGCTGCCGGCGCTGCC
CTCGACCCGTTTGACGCCGGAGCAGCAATATTGGAAGACCTTCAAGAATC
CTCTCCTCATCCCCTCGCCAGCCAATGGCCCCGTCAACCTCATCACGCAA
CCCTCCGCTCCCTCCTCTGCCTCCGCCTTCCCTTCCCTCACCCAACCCCC
GATGTGTTCACCGTGACCACCGGCGCCCGCGTCCAGATCTACTCCATCCG
CACTCGCAAACTCCTCCGCACAATCACCCGCTTCGATGATACGGTACGAG
GCACAGACGTCCGTCCCGACGGGCGAGTCATCGCCGTTGGTGACGATTCT
GGTACGGTGCAGGTGTTCGACGTGAGCTCCCGTGCCATCTTGAAGACATG
GAAGGATCACAAGCAGCCCGTCTGGGTCACGAAATTCTCCCCCAGCGACC
CTACATGCGTCATGACCGCCAGTGACGATCGGACGGTACGACTGTGGGAT
CTTCCCAGCGAGAACAGCCAGAAGGTCTTCACTGGCCATACCGATTACGT
GCGCAGCGGTGCATTCATGCCGGGGTCTCTGGCCTCCTCCGGCCTGGTGG
TCTCTGGTAGTTACGACCGGACCGTGCGACTGTGGGATCCTCGCGTTGAG
AACCGGTCCGCTATGACATTCAAGATGGGCGCAGCGATTGAGACGGTGCT
CCCCATGCCCACGGGCACGACGGTGCTTGCGGCGGCCGACAACAAGATCG
CGGTGCTGGATATCGTGGCCGGTAAGCCTCTGCACATGATTCAGAGCCAC
CAAAAGACCGTCACGTCGCTGGCGCTGGCGTCGAACGGCGAGCGCCTGCT
CTCCGGTGCGCTGGACGGCCACATGAAGGTATTCGAAACGACCGGCTGGA
ACATGGTCTCGGGCTCCAAGTACCCGTCCCCCATTCTCTCCCTTCGCGCG
ATCACATCGGGCATCGCCCAGGAGGACAAGCACATTGCCGTCGGTATGCA
GTCTGGTCTTCTGTCGATCAAGACCCGCCTGTCCGGACAACAGAAGATCC
GTGAGCGCGAGCGCCGCAAGGAGATGCAGGCGCTGCTGGAAGGCAAGCTG
GAAGAGCACGACCGGAAGGCGGCAAAGCAAAAGAAGCAGCGCGGATCCGG
ATGGGAGAAGCGCCTGCGCGGACAGGACTTTGTCGGTGAGGGCGTGGACA
TTGTGATCGAGGGGCGGGACCTCAAGAAGCGGAAGAAGGAGCAACCGTGG
GAACTCGACCTGCGCAAGGCGAAGTACTCGGCGGCCCTGGATCAGGTGCT
GCGCTCGAACGACAAGACAGCACAATTGACGCTATTGACGGCGCTGCGGC
ATCGGTCCGCGCTGCGGGCGTCCCTGCAGAACCGCGACGAGGTGACGCTG
CAGCCCGTGCTGCAATGGGTGCACAAGAACATCACGGAGCCGCGACTGGT
GCAGCTGAGTGTGGAGGTGGCGATGAACGTGCTGGATATCTACTCGGGCA
ACCTGGGCCAGTCGGCGCAGATCGACAAGATGGTGGAGCGGCTGCACCGG
CGAGTGCGCGACGAGGTGGAGATGGCGCATCAAGCGTACCAGACGAAGGG
AATGTTGGAGATGCTTGCTGCATGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:1223214..1224838-

>CAN33_2005-T1 ID=CAN33_2005-T1|Name=CAN33_2005-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3042bp|location=Sequence derived from alignment at NKJJ01000004.1:1223214..1224838- (Aspergillus niger FDAARGOS_311)
ATCTACTCCATCCGCACTCGCAAACTCCTCCGCACAATCACCCGCTTCGA
TGATACGGTACGAGGCACAGACGTCCGTCCCGACGGGCGAGTCATCGCCG
TTGGTGACGATTCTGGTACGGTGCAGGTGTTCGACGTGAGCTCCCGTGCC
ATCTTGAAGACATGGAAGGATCACAAGCAGCCCGTCTGGGTCACGAAATT
CTCCCCCAGCGACCCTACATGCGTCATGACCGCCAGTGACGATCGGACGG
TACGACTGTGGGATCTTCCCAGCGAGAACAGCCAGAAGGTCTTCACTGGC
CATACCGATTACGTGCGCAGCGGTGCATTCATGCCGGGGTCTCTGGCCTC
CTCCGGCCTGGTGGTCTCTGGTAGTTACGACCGGACCGTGCGACTGTGGG
ATCCTCGCGTTGAGAACCGGTCCGCTATGACATTCAAGATGGGCGCAGCG
ATTGAGACGGTGCTCCCCATGCCCACGGGCACGACGGTGCTTGCGGCGGC
CGACAACAAGATCGCGGTGCTGGATATCGTGGCCGGTAAGCCTCTGCACA
TGATTCAGAGCCACCAAAAGACCGTCACGTCGCTGGCGCTGGCGTCGAAC
GGCGAGCGCCTGCTCTCCGGTGCGCTGGACGGCCACATGAAGGTATTCGA
AACGACCGGCTGGAACATGGTCTCGGGCTCCAAGTACCCGTCCCCCATTC
TCTCCCTTCGCGCGATCACATCGGGCATCGCCCAGGAGGACAAGCACATT
GCCGTCGGTATGCAGTCTGGTCTTCTGTCGATCAAGACCCGCCTGTCCGG
ACAACAGAAGATCCGTGAGCGCGAGCGCCGCAAGGAGATGCAGGCGCTGC
TGGAAGGCAAGCTGGAAGAGCACGACCGGAAGGCGGCAAAGCAAAAGAAG
CAGCGCGGATCCGGATGGGAGAAGCGCCTGCGCGGACAGGACTTTGTCGG
TGAGGGCGTGGACATTGTGATCGAGGGGCGGGACCTCAAGAAGCGGAAGA
AGGAGCAACCGTGGGAACTCGACCTGCGCAAGGCGAAGTACTCGGCGGCC
CTGGATCAGGTGCTGCGCTCGAACGACAAGACAGCACAATTGACGCTATT
GACGGCGCTGCGGCATCGGTCCGCGCTGCGGGCGTCCCTGCAGAACCGCG
ACGAGGTGACGCTGCAGCCCGTGCTGCAATGGGTGCACAAGAACATCACG
GAGCCGCGACTGGTGCAGCTGAGTGTGGAGGTGGCGATGAACGTGCTGGA
TATCTACTCGGGCAACCTGGGCCAGTCGGCGCAGATCGACAAGATGGTGG
AGCGGCTGCACCGGCGAGTGCGCGACGAGGTGGAGATGGCGCATCAAGCG
TACCAGACGAAGGGAATGTTGGAGATGCTTGCTGCATGAATGGCTGCCCC
CGTCCTCCCTCTGCAGCAGGTCAAGCTGCCGGCGCTGCCCTCGACCCGTT
TGACGCCGGAGCAGCAATATTGGAAGACCTTCAAGAATCCTCTCCTCATC
CCCTCGCCAGCCAATGGCCCCATCTACTCCATCCGCACTCGCAAACTCCT
CCGCACAATCACCCGCTTCGATGATACGGTACGAGGCACAGACGTCCGTC
CCGACGGGCGAGTCATCGCCGTTGGTGACGATTCTGGTACGGTGCAGGTG
TTCGACGTGAGCTCCCGTGCCATCTTGAAGACATGGAAGGATCACAAGCA
GCCCGTCTGGGTCACGAAATTCTCCCCCAGCGACCCTACATGCGTCATGA
CCGCCAGTGACGATCGGACGGTACGACTGTGGGATCTTCCCAGCGAGAAC
AGCCAGAAGGTCTTCACTGGCCATACCGATTACGTGCGCAGCGGTGCATT
CATGCCGGGGTCTCTGGCCTCCTCCGGCCTGGTGGTCTCTGGTAGTTACG
ACCGGACCGTGCGACTGTGGGATCCTCGCGTTGAGAACCGGTCCGCTATG
ACATTCAAGATGGGCGCAGCGATTGAGACGGTGCTCCCCATGCCCACGGG
CACGACGGTGCTTGCGGCGGCCGACAACAAGATCGCGGTGCTGGATATCG
TGGCCGGTAAGCCTCTGCACATGATTCAGAGCCACCAAAAGACCGTCACG
TCGCTGGCGCTGGCGTCGAACGGCGAGCGCCTGCTCTCCGGTGCGCTGGA
CGGCCACATGAAGGTATTCGAAACGACCGGCTGGAACATGGTCTCGGGCT
CCAAGTACCCGTCCCCCATTCTCTCCCTTCGCGCGATCACATCGGGCATC
GCCCAGGAGGACAAGCACATTGCCGTCGGTATGCAGTCTGGTCTTCTGTC
GATCAAGACCCGCCTGTCCGGACAACAGAAGATCCGTGAGCGCGAGCGCC
GCAAGGAGATGCAGGCGCTGCTGGAAGGCAAGCTGGAAGAGCACGACCGG
AAGGCGGCAAAGCAAAAGAAGCAGCGCGGATCCGGATGGGAGAAGCGCCT
GCGCGGACAGGACTTTGTCGGTGAGGGCGTGGACATTGTGATCGAGGGGC
GGGACCTCAAGAAGCGGAAGAAGGAGCAACCGTGGGAACTCGACCTGCGC
AAGGCGAAGTACTCGGCGGCCCTGGATCAGGTGCTGCGCTCGAACGACAA
GACAGCACAATTGACGCTATTGACGGCGCTGCGGCATCGGTCCGCGCTGC
GGGCGTCCCTGCAGAACCGCGACGAGGTGACGCTGCAGCCCGTGCTGCAA
TGGGTGCACAAGAACATCACGGAGCCGCGACTGGTGCAGCTGAGTGTGGA
GGTGGCGATGAACGTGCTGGATATCTACTCGGGCAACCTGGGCCAGTCGG
CGCAGATCGACAAGATGGTGGAGCGGCTGCACCGGCGAGTGCGCGACGAG
GTGGAGATGGCGCATCAAGCGTACCAGACGAAGGGAATGTTGGAGATGCT
TGCTGCATGAATGGCTGCCCCCGTCCTCCCTCTGCAGCAGGTCAAGCTGC
CGGCGCTGCCCTCGACCCGTTTGACGCCGGAGCAGCAATATTGGAAGACC
TTCAAGAATCCTCTCCTCATCCCCTCGCCAGCCAATGGCCCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_2005CAN33_2005Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2005-T1CAN33_2005-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2005-T1.cdsCAN33_2005-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2005-T1.exon2CAN33_2005-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_2005-T1.exon1CAN33_2005-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09261MMR
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR018983
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF09384
ProductUTP15 C terminal family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1223214..1224838 -
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