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CAN33_20170-T1, CAN33_20170-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_20170-T1
Unique NameCAN33_20170-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2517079..2517841-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_20170-T1 ID=CAN33_20170-T1|Name=CAN33_20170-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=763bp|location=Sequence derived from alignment at NKJJ01000011.1:2517079..2517841- (Aspergillus niger FDAARGOS_311)
ATGGGTCAGCACTCCGCTATCTGGCAAGGTACGACAAGAACACATGCTCC
TTTGACATTCCATTCTCTTCTATCTAGCATTTTCTTTTGGGTATTCCTAG
GCTGACTCTTGCTGTTCTTCCTGCCTAGGATATGTCGATTCCAGGTACCG
TATAACCTAACCATATTTACCCCGCTTCGGCCACTGCCGCCCCTCCAAGT
TGGTATCGGAATTCTGACGCGAAGCCATTCAGCTTGATGGGATCTGGCCA
ATTTGACAAGGCCGGTATCCTGAGCCACGACATCTCCGGCGTTGAGGCCT
CCTCTCCCGGCTTCACGGTATGACACGCTCTCCAGCAACCGCCGGCCTGA
TCGGCGTGACCTTACGGCCAAGCAAGCGCCGACCAGCACGAATCCAGCGT
TAACGACCACCATAGATCTCCCCCAAGAACTTCAGGGCCTTGCCGCTGCC
TTCAAGGACCCCAACGCTGCCTGGGGTAACGGTATCACCGTTGGCGGAGA
GAAGTTCGTCACCATCAAGGCTGACGACCGCAGTCTGTACGGCAAGAAGG
TACTATCGCACCCACCCACCCCCTATTACCTACCAAAGTATTCCACATGT
GCTGATATTGGGGAACAAACAGGGCAAGGAGGGTATCGTTGTCGTCAAGG
CCGTCTCCTGCGTCATGGTCGCCCACCACGCGGAGAACGTCCAGACCCCG
AATGCCGCTACCGTGGTCGAGAACCTCGTTGACTACATCAACAACCCCGG
TGAATGGGTCTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:2517079..2517841-

>CAN33_20170-T1 ID=CAN33_20170-T1|Name=CAN33_20170-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2235bp|location=Sequence derived from alignment at NKJJ01000011.1:2517079..2517841- (Aspergillus niger FDAARGOS_311)
GGCAAGGAGGGTATCGTTGTCGTCAAGGCCGTCTCCTGCGTCATGGTCGC
CCACCACGCGGAGAACGTCCAGACCCCGAATGCCGCTACCGTGGTCGAGA
ACCTCGTTGACTACATCAACAACCCCGGTGAATGGGTCTAACAAGCGCCG
ACCAGCACGAATCCAGCGTTAACGACCACCATAGATCTCCCCCAAGAACT
TCAGGGCCTTGCCGCTGCCTTCAAGGACCCCAACGCTGCCTGGGGTAACG
GTATCACCGTTGGCGGAGAGAAGTTCGTCACCATCAAGGCTGACGACCGC
AGTCTGTACGGCAAGAAGCTTGATGGGATCTGGCCAATTTGACAAGGCCG
GTATCCTGAGCCACGACATCTCCGGCGTTGAGGCCTCCTCTCCCGGCTTC
ACGGATATGTCGATTCCAGATGGGTCAGCACTCCGCTATCTGGCAAGGGC
AAGGAGGGTATCGTTGTCGTCAAGGCCGTCTCCTGCGTCATGGTCGCCCA
CCACGCGGAGAACGTCCAGACCCCGAATGCCGCTACCGTGGTCGAGAACC
TCGTTGACTACATCAACAACCCCGGTGAATGGGTCTAACAAGCGCCGACC
AGCACGAATCCAGCGTTAACGACCACCATAGATCTCCCCCAAGAACTTCA
GGGCCTTGCCGCTGCCTTCAAGGACCCCAACGCTGCCTGGGGTAACGGTA
TCACCGTTGGCGGAGAGAAGTTCGTCACCATCAAGGCTGACGACCGCAGT
CTGTACGGCAAGAAGCTTGATGGGATCTGGCCAATTTGACAAGGCCGGTA
TCCTGAGCCACGACATCTCCGGCGTTGAGGCCTCCTCTCCCGGCTTCACG
GATATGTCGATTCCAGATGGGTCAGCACTCCGCTATCTGGCAAGGGCAAG
GAGGGTATCGTTGTCGTCAAGGCCGTCTCCTGCGTCATGGTCGCCCACCA
CGCGGAGAACGTCCAGACCCCGAATGCCGCTACCGTGGTCGAGAACCTCG
TTGACTACATCAACAACCCCGGTGAATGGGTCTAACAAGCGCCGACCAGC
ACGAATCCAGCGTTAACGACCACCATAGATCTCCCCCAAGAACTTCAGGG
CCTTGCCGCTGCCTTCAAGGACCCCAACGCTGCCTGGGGTAACGGTATCA
CCGTTGGCGGAGAGAAGTTCGTCACCATCAAGGCTGACGACCGCAGTCTG
TACGGCAAGAAGCTTGATGGGATCTGGCCAATTTGACAAGGCCGGTATCC
TGAGCCACGACATCTCCGGCGTTGAGGCCTCCTCTCCCGGCTTCACGGAT
ATGTCGATTCCAGATGGGTCAGCACTCCGCTATCTGGCAAGGGCAAGGAG
GGTATCGTTGTCGTCAAGGCCGTCTCCTGCGTCATGGTCGCCCACCACGC
GGAGAACGTCCAGACCCCGAATGCCGCTACCGTGGTCGAGAACCTCGTTG
ACTACATCAACAACCCCGGTGAATGGGTCTAACAAGCGCCGACCAGCACG
AATCCAGCGTTAACGACCACCATAGATCTCCCCCAAGAACTTCAGGGCCT
TGCCGCTGCCTTCAAGGACCCCAACGCTGCCTGGGGTAACGGTATCACCG
TTGGCGGAGAGAAGTTCGTCACCATCAAGGCTGACGACCGCAGTCTGTAC
GGCAAGAAGCTTGATGGGATCTGGCCAATTTGACAAGGCCGGTATCCTGA
GCCACGACATCTCCGGCGTTGAGGCCTCCTCTCCCGGCTTCACGGATATG
TCGATTCCAGATGGGTCAGCACTCCGCTATCTGGCAAGGGCAAGGAGGGT
ATCGTTGTCGTCAAGGCCGTCTCCTGCGTCATGGTCGCCCACCACGCGGA
GAACGTCCAGACCCCGAATGCCGCTACCGTGGTCGAGAACCTCGTTGACT
ACATCAACAACCCCGGTGAATGGGTCTAACAAGCGCCGACCAGCACGAAT
CCAGCGTTAACGACCACCATAGATCTCCCCCAAGAACTTCAGGGCCTTGC
CGCTGCCTTCAAGGACCCCAACGCTGCCTGGGGTAACGGTATCACCGTTG
GCGGAGAGAAGTTCGTCACCATCAAGGCTGACGACCGCAGTCTGTACGGC
AAGAAGCTTGATGGGATCTGGCCAATTTGACAAGGCCGGTATCCTGAGCC
ACGACATCTCCGGCGTTGAGGCCTCCTCTCCCGGCTTCACGGATATGTCG
ATTCCAGATGGGTCAGCACTCCGCTATCTGGCAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_20170CAN33_20170Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20170-T1CAN33_20170-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20170-T1.cdsCAN33_20170-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20170-T1.exon5CAN33_20170-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_20170-T1.exon4CAN33_20170-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_20170-T1.exon3CAN33_20170-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_20170-T1.exon2CAN33_20170-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_20170-T1.exon1CAN33_20170-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036140
DBxrefInterPro:IPR005455
DBxrefPFAM:PF00235
ProductProfilin family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2517079..2517841 -
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