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CAN33_20200-T1, CAN33_20200-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_20200-T1
Unique NameCAN33_20200-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2535524..2536923-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_20200-T1 ID=CAN33_20200-T1|Name=CAN33_20200-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1400bp|location=Sequence derived from alignment at NKJJ01000011.1:2535524..2536923- (Aspergillus niger FDAARGOS_311)
ATGTCCCGTATATACCAACTAAGCCGAGCATTTCAGCGCAGCCAAGTTGG
CGCGCTCCGGCCGCGCTCTCTACTACCCGCTCGGTCATCCCGCTGCGGCT
TCAGCACCAGCGCCACACGCCCATTAATGGAATTAACAGGCTTCACCGAA
GAGCAACTAACAGTGCGCGACGCCGTATCCGCCATCTGCGCCAAGTTCCC
CAACACATACTGGCAGGATTGCGACCAAAATGAGCGCGACCCGAATGAGT
TCCACGCCGCCCTAGCCCGAGACGGATGGTTAGGAATCGCGCTGCCTGAG
GAACTAGGAGGCGCAGGTCTAGGTACACCCAAATCTTCCTATTCTATCAT
CCTTCATTGCAATTGCAACTAATACCACGTCCAGGAATCTCCGAAGCAAC
AATGATGATGCAAACCATCACCCAATCCGGTGCCGGCATGGCCGGCGCGC
AAGCCATCCACGCCAACGTGTACGCAACACAACCACTCGCCCGCTTCGGC
ACCCGCGAGCAACTGGAAGAAACCATCCCCAAGATCATCAATGGTACATG
GCGCACCTGCTTTGGTGTCACAGAGCCCAACACGGGTCTGGAAACGCTCA
AGCTGAAGACGCTAGCTACCAAAAAGTCCCGCGGGGATAGTGATATCTAC
TCCATCTCAGGCCAGAAGATCTGGATTACCTGCGCGCAAGTCGCTAGCAA
AATGATCCTGTTAGCGCGCACGACCCCCTTGGAAGAAGTTACCAAGTCGA
CACAAGGCCTATCTATGTTCTGCATCGACCTCGACCGCACACAGCCCGGT
CTGGATATGCGCAAGATCAAGAAGATGGGCGGACGTGCCGTCGACGCCAA
CGAAGTCTTCTTCGATGGGTACGAAGTGCCCGCGAACACGCTCATCGGGC
AGGAAAACGAAGGGTTCCGGATCATTCTGCATGGTATGAACGCGGAGCGG
TGTTTGCTGGCGGGTGAGGCATTGGGGCTGGGGTATGCGGCGCTGGAGCG
AGCAGCTGATTATGCGAAGGAGAGGGTGGTGTTTGGACGGCCGATTGGGC
AGAATCAGGGCATTGCGCATCCGTTGGCGGATGCGTATATGAGGTTGGAG
GCGGCCAAGCTGGCGACGTATCATGCTGCGAGATTGTATGATGCGTCGAA
GAAGGATGAGGGGATTCCGCTGCATTCCGTCGGGGTGGCGTGTAACAGTG
CCAAGTATTTGGCTGCTGAGGCGGCGTTTACGGCGTGTGAGAGGGCGGTG
CTGAGCCATGGGGGCATGGGGTATGCAATGGAATATGATGTGGAGAGGTA
CTTGAGGGAGTGTCTGGTGCCCAGGATCGCGCCGGTCAGTCGCGAGATGA
TTTTGAATTATGTTAGTGAGAAGGTGTTGCAGTTGCCGAGGAGTTATTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:2535524..2536923-

>CAN33_20200-T1 ID=CAN33_20200-T1|Name=CAN33_20200-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2676bp|location=Sequence derived from alignment at NKJJ01000011.1:2535524..2536923- (Aspergillus niger FDAARGOS_311)
GAATCTCCGAAGCAACAATGATGATGCAAACCATCACCCAATCCGGTGCC
GGCATGGCCGGCGCGCAAGCCATCCACGCCAACGTGTACGCAACACAACC
ACTCGCCCGCTTCGGCACCCGCGAGCAACTGGAAGAAACCATCCCCAAGA
TCATCAATGGTACATGGCGCACCTGCTTTGGTGTCACAGAGCCCAACACG
GGTCTGGAAACGCTCAAGCTGAAGACGCTAGCTACCAAAAAGTCCCGCGG
GGATAGTGATATCTACTCCATCTCAGGCCAGAAGATCTGGATTACCTGCG
CGCAAGTCGCTAGCAAAATGATCCTGTTAGCGCGCACGACCCCCTTGGAA
GAAGTTACCAAGTCGACACAAGGCCTATCTATGTTCTGCATCGACCTCGA
CCGCACACAGCCCGGTCTGGATATGCGCAAGATCAAGAAGATGGGCGGAC
GTGCCGTCGACGCCAACGAAGTCTTCTTCGATGGGTACGAAGTGCCCGCG
AACACGCTCATCGGGCAGGAAAACGAAGGGTTCCGGATCATTCTGCATGG
TATGAACGCGGAGCGGTGTTTGCTGGCGGGTGAGGCATTGGGGCTGGGGT
ATGCGGCGCTGGAGCGAGCAGCTGATTATGCGAAGGAGAGGGTGGTGTTT
GGACGGCCGATTGGGCAGAATCAGGGCATTGCGCATCCGTTGGCGGATGC
GTATATGAGGTTGGAGGCGGCCAAGCTGGCGACGTATCATGCTGCGAGAT
TGTATGATGCGTCGAAGAAGGATGAGGGGATTCCGCTGCATTCCGTCGGG
GTGGCGTGTAACAGTGCCAAGTATTTGGCTGCTGAGGCGGCGTTTACGGC
GTGTGAGAGGGCGGTGCTGAGCCATGGGGGCATGGGGTATGCAATGGAAT
ATGATGTGGAGAGGTACTTGAGGGAGTGTCTGGTGCCCAGGATCGCGCCG
GTCAGTCGCGAGATGATTTTGAATTATGTTAGTGAGAAGGTGTTGCAGTT
GCCGAGGAGTTATTAAATGTCCCGTATATACCAACTAAGCCGAGCATTTC
AGCGCAGCCAAGTTGGCGCGCTCCGGCCGCGCTCTCTACTACCCGCTCGG
TCATCCCGCTGCGGCTTCAGCACCAGCGCCACACGCCCATTAATGGAATT
AACAGGCTTCACCGAAGAGCAACTAACAGTGCGCGACGCCGTATCCGCCA
TCTGCGCCAAGTTCCCCAACACATACTGGCAGGATTGCGACCAAAATGAG
CGCGACCCGAATGAGTTCCACGCCGCCCTAGCCCGAGACGGATGGTTAGG
AATCGCGCTGCCTGAGGAACTAGGAGGCGCAGGTCTAGGAATCTCCGAAG
CAACAATGATGATGCAAACCATCACCCAATCCGGTGCCGGCATGGCCGGC
GCGCAAGCCATCCACGCCAACGTGTACGCAACACAACCACTCGCCCGCTT
CGGCACCCGCGAGCAACTGGAAGAAACCATCCCCAAGATCATCAATGGTA
CATGGCGCACCTGCTTTGGTGTCACAGAGCCCAACACGGGTCTGGAAACG
CTCAAGCTGAAGACGCTAGCTACCAAAAAGTCCCGCGGGGATAGTGATAT
CTACTCCATCTCAGGCCAGAAGATCTGGATTACCTGCGCGCAAGTCGCTA
GCAAAATGATCCTGTTAGCGCGCACGACCCCCTTGGAAGAAGTTACCAAG
TCGACACAAGGCCTATCTATGTTCTGCATCGACCTCGACCGCACACAGCC
CGGTCTGGATATGCGCAAGATCAAGAAGATGGGCGGACGTGCCGTCGACG
CCAACGAAGTCTTCTTCGATGGGTACGAAGTGCCCGCGAACACGCTCATC
GGGCAGGAAAACGAAGGGTTCCGGATCATTCTGCATGGTATGAACGCGGA
GCGGTGTTTGCTGGCGGGTGAGGCATTGGGGCTGGGGTATGCGGCGCTGG
AGCGAGCAGCTGATTATGCGAAGGAGAGGGTGGTGTTTGGACGGCCGATT
GGGCAGAATCAGGGCATTGCGCATCCGTTGGCGGATGCGTATATGAGGTT
GGAGGCGGCCAAGCTGGCGACGTATCATGCTGCGAGATTGTATGATGCGT
CGAAGAAGGATGAGGGGATTCCGCTGCATTCCGTCGGGGTGGCGTGTAAC
AGTGCCAAGTATTTGGCTGCTGAGGCGGCGTTTACGGCGTGTGAGAGGGC
GGTGCTGAGCCATGGGGGCATGGGGTATGCAATGGAATATGATGTGGAGA
GGTACTTGAGGGAGTGTCTGGTGCCCAGGATCGCGCCGGTCAGTCGCGAG
ATGATTTTGAATTATGTTAGTGAGAAGGTGTTGCAGTTGCCGAGGAGTTA
TTAAATGTCCCGTATATACCAACTAAGCCGAGCATTTCAGCGCAGCCAAG
TTGGCGCGCTCCGGCCGCGCTCTCTACTACCCGCTCGGTCATCCCGCTGC
GGCTTCAGCACCAGCGCCACACGCCCATTAATGGAATTAACAGGCTTCAC
CGAAGAGCAACTAACAGTGCGCGACGCCGTATCCGCCATCTGCGCCAAGT
TCCCCAACACATACTGGCAGGATTGCGACCAAAATGAGCGCGACCCGAAT
GAGTTCCACGCCGCCCTAGCCCGAGACGGATGGTTAGGAATCGCGCTGCC
TGAGGAACTAGGAGGCGCAGGTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_20200CAN33_20200Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20200-T1CAN33_20200-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20200-T1.cdsCAN33_20200-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20200-T1.exon2CAN33_20200-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_20200-T1.exon1CAN33_20200-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036250
DBxrefInterPro:IPR009100
DBxrefInterPro:IPR037069
DBxrefInterPro:IPR013786
DBxrefInterPro:IPR006091
DBxrefInterPro:IPR009075
DBxrefPFAM:PF02771
DBxrefPFAM:PF02770
DBxrefPFAM:PF08028
DBxrefPFAM:PF00441
ProductAcyl-CoA dehydrogenase C-terminal domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2535524..2536923 -
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