You are here

Home

CAN33_20290-T1, CAN33_20290-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_20290-T1
Unique NameCAN33_20290-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2587394..2588524+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_20290-T1 ID=CAN33_20290-T1|Name=CAN33_20290-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1131bp|location=Sequence derived from alignment at NKJJ01000011.1:2587394..2588524+ (Aspergillus niger FDAARGOS_311)
ATGGAGCCACAGAATCTGCAGGCAGCATCTACTTACATCAATAATGTCTT
GTTGGCCAGGGGGCTGCTGAAGAGCGGCCAACCTATTGATTTCGCCAATC
CTGAAGATGAGGAGGGAGGCACGGCGGCCACAATGGGGAGGATTATCAAC
TTGGTCAATGATCTGGTTTTGCGCAGAGATGTATGGAGCAGCAAGGCCCA
GGGGAAAAGTTGCACTGGCTAACAGCGACAACAGCGTGAAGCCGAACACC
GAGAGAACCTAGCAACCACAATCCGCACCCTGCGCGCGGAAGAATCGCAG
AAAACAGCAGAGTTGGTACGATAGGCATCGAATGTATACTTTGCGACCAC
AATGAAGGCTAACGACTTTTCTGTAGGAGAAAGTCAAGACGAAGGCATCC
GAGCTGACCCGTTCGCTGGCTCTCGCAGAAGCGCAAGAGCGAGCATTGAA
GGCGAACGCTTCTAGTGCCGATTCGACTATTCGAGGACTGAAGGAACAAG
TGCAACGTATGAAGACGACCATTCAGCAAGTTCGAGCTCAATGCGCAAAT
GACATCCGCAAACGCGACCTGGAAATGCAGAAACTGAAATCGCACTTGGC
TGAACGCCAGCGCGGAAAGCGGGAAGGGCTGTCGATGACCACTATCAATA
TCAACCCAGCAGCCAGCCAATCATCTCGGTCGAGACTGGCGGCCGGTGGT
GAGGGCATCAACGATCCTGGATACAGTCTCAAACAGGAAACGAACGACTT
CCTTACTGAACTATGTCAAAACCTCAGCGATGAGAATGATACGCTGATAT
CATTGGCACGAAACACAGTTGAGACTTTGAAGGATCTCCAGGGTCTATCA
CAAGCCGAAGACGAAGATAAGTCCGCGACCGGGATGGCAAGTGTCGGTGC
TGGACGGTCCCTGCAAGGCTCGGTAACGGCACTACCGACCTCTTGTGACG
AGCTATCAGCACAAATGGACCATGTCCTCGAGCATCTACGAACACTGCTC
ACGAACCCATCGTTCGTACCTCTAGAGGAAGTAGAAATGCGGGACGAAGA
AATTAAACGACTTCGCGAAGGCTGGGAGAAAATGGAAAGCCGGTGGAGCC
AGGCCGTTACGATGATGGATGGCTGGCATAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:2587394..2588524+

>CAN33_20290-T1 ID=CAN33_20290-T1|Name=CAN33_20290-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3828bp|location=Sequence derived from alignment at NKJJ01000011.1:2587394..2588524+ (Aspergillus niger FDAARGOS_311)
ATGGAGCCACAGAATCTGCAGGCAGCATCTACTTACATCAATAATGTCTT
GTTGGCCAGGGGGCTGCTGAAGAGCGGCCAACCTATTGATTTCGCCAATC
CTGAAGATGAGGAGGGAGGCACGGCGGCCACAATGGGGAGGATTATCAAC
TTGGTCAATGATCTGGTTTTGCGCAGAGATCGTGAAGCCGAACACCGAGA
GAACCTAGCAACCACAATCCGCACCCTGCGCGCGGAAGAATCGCAGAAAA
CAGCAGAGTTGGAGAAAGTCAAGACGAAGGCATCCGAGCTGACCCGTTCG
CTGGCTCTCGCAGAAGCGCAAGAGCGAGCATTGAAGGCGAACGCTTCTAG
TGCCGATTCGACTATTCGAGGACTGAAGGAACAAGTGCAACGTATGAAGA
CGACCATTCAGCAAGTTCGAGCTCAATGCGCAAATGACATCCGCAAACGC
GACCTGGAAATGCAGAAACTGAAATCGCACTTGGCTGAACGCCAGCGCGG
AAAGCGGGAAGGGCTGTCGATGACCACTATCAATATCAACCCAGCAGCCA
GCCAATCATCTCGGTCGAGACTGGCGGCCGGTGGTGAGGGCATCAACGAT
CCTGGATACAGTCTCAAACAGGAAACGAACGACTTCCTTACTGAACTATG
TCAAAACCTCAGCGATGAGAATGATACGCTGATATCATTGGCACGAAACA
CAGTTGAGACTTTGAAGGATCTCCAGGGTCTATCACAAGCCGAAGACGAA
GATAAGTCCGCGACCGGGATGGCAAGTGTCGGTGCTGGACGGTCCCTGCA
AGGCTCGGTAACGGCACTACCGACCTCTTGTGACGAGCTATCAGCACAAA
TGGACCATGTCCTCGAGCATCTACGAACACTGCTCACGAACCCATCGCTG
GGAGAAAATGGAAAGCCGGTGGAGCCAGGCCGTTACGATGATGGATGGCT
GGCATAAATGGAGCCACAGAATCTGCAGGCAGCATCTACTTACATCAATA
ATGTCTTGTTGGCCAGGGGGCTGCTGAAGAGCGGCCAACCTATTGATTTC
GCCAATCCTGAAGATGAGGAGGGAGGCACGGCGGCCACAATGGGGAGGAT
TATCAACTTGGTCAATGATCTGGTTTTGCGCAGAGATCGTGAAGCCGAAC
ACCGAGAGAACCTAGCAACCACAATCCGCACCCTGCGCGCGGAAGAATCG
CAGAAAACAGCAGAGTTGGAGAAAGTCAAGACGAAGGCATCCGAGCTGAC
CCGTTCGCTGGCTCTCGCAGAAGCGCAAGAGCGAGCATTGAAGGCGAACG
CTTCTAGTGCCGATTCGACTATTCGAGGACTGAAGGAACAAGTGCAACGT
ATGAAGACGACCATTCAGCAAGTTCGAGCTCAATGCGCAAATGACATCCG
CAAACGCGACCTGGAAATGCAGAAACTGAAATCGCACTTGGCTGAACGCC
AGCGCGGAAAGCGGGAAGGGCTGTCGATGACCACTATCAATATCAACCCA
GCAGCCAGCCAATCATCTCGGTCGAGACTGGCGGCCGGTGGTGAGGGCAT
CAACGATCCTGGATACAGTCTCAAACAGGAAACGAACGACTTCCTTACTG
AACTATGTCAAAACCTCAGCGATGAGAATGATACGCTGATATCATTGGCA
CGAAACACAGTTGAGACTTTGAAGGATCTCCAGGGTCTATCACAAGCCGA
AGACGAAGATAAGTCCGCGACCGGGATGGCAAGTGTCGGTGCTGGACGGT
CCCTGCAAGGCTCGGTAACGGCACTACCGACCTCTTGTGACGAGCTATCA
GCACAAATGGACCATGTCCTCGAGCATCTACGAACACTGCTCACGAACCC
ATCGCTGGGAGAAAATGGAAAGCCGGTGGAGCCAGGCCGTTACGATGATG
GATGGCTGGCATAAATGGAGCCACAGAATCTGCAGGCAGCATCTACTTAC
ATCAATAATGTCTTGTTGGCCAGGGGGCTGCTGAAGAGCGGCCAACCTAT
TGATTTCGCCAATCCTGAAGATGAGGAGGGAGGCACGGCGGCCACAATGG
GGAGGATTATCAACTTGGTCAATGATCTGGTTTTGCGCAGAGATCGTGAA
GCCGAACACCGAGAGAACCTAGCAACCACAATCCGCACCCTGCGCGCGGA
AGAATCGCAGAAAACAGCAGAGTTGGAGAAAGTCAAGACGAAGGCATCCG
AGCTGACCCGTTCGCTGGCTCTCGCAGAAGCGCAAGAGCGAGCATTGAAG
GCGAACGCTTCTAGTGCCGATTCGACTATTCGAGGACTGAAGGAACAAGT
GCAACGTATGAAGACGACCATTCAGCAAGTTCGAGCTCAATGCGCAAATG
ACATCCGCAAACGCGACCTGGAAATGCAGAAACTGAAATCGCACTTGGCT
GAACGCCAGCGCGGAAAGCGGGAAGGGCTGTCGATGACCACTATCAATAT
CAACCCAGCAGCCAGCCAATCATCTCGGTCGAGACTGGCGGCCGGTGGTG
AGGGCATCAACGATCCTGGATACAGTCTCAAACAGGAAACGAACGACTTC
CTTACTGAACTATGTCAAAACCTCAGCGATGAGAATGATACGCTGATATC
ATTGGCACGAAACACAGTTGAGACTTTGAAGGATCTCCAGGGTCTATCAC
AAGCCGAAGACGAAGATAAGTCCGCGACCGGGATGGCAAGTGTCGGTGCT
GGACGGTCCCTGCAAGGCTCGGTAACGGCACTACCGACCTCTTGTGACGA
GCTATCAGCACAAATGGACCATGTCCTCGAGCATCTACGAACACTGCTCA
CGAACCCATCGCTGGGAGAAAATGGAAAGCCGGTGGAGCCAGGCCGTTAC
GATGATGGATGGCTGGCATAAATGGAGCCACAGAATCTGCAGGCAGCATC
TACTTACATCAATAATGTCTTGTTGGCCAGGGGGCTGCTGAAGAGCGGCC
AACCTATTGATTTCGCCAATCCTGAAGATGAGGAGGGAGGCACGGCGGCC
ACAATGGGGAGGATTATCAACTTGGTCAATGATCTGGTTTTGCGCAGAGA
TCGTGAAGCCGAACACCGAGAGAACCTAGCAACCACAATCCGCACCCTGC
GCGCGGAAGAATCGCAGAAAACAGCAGAGTTGGAGAAAGTCAAGACGAAG
GCATCCGAGCTGACCCGTTCGCTGGCTCTCGCAGAAGCGCAAGAGCGAGC
ATTGAAGGCGAACGCTTCTAGTGCCGATTCGACTATTCGAGGACTGAAGG
AACAAGTGCAACGTATGAAGACGACCATTCAGCAAGTTCGAGCTCAATGC
GCAAATGACATCCGCAAACGCGACCTGGAAATGCAGAAACTGAAATCGCA
CTTGGCTGAACGCCAGCGCGGAAAGCGGGAAGGGCTGTCGATGACCACTA
TCAATATCAACCCAGCAGCCAGCCAATCATCTCGGTCGAGACTGGCGGCC
GGTGGTGAGGGCATCAACGATCCTGGATACAGTCTCAAACAGGAAACGAA
CGACTTCCTTACTGAACTATGTCAAAACCTCAGCGATGAGAATGATACGC
TGATATCATTGGCACGAAACACAGTTGAGACTTTGAAGGATCTCCAGGGT
CTATCACAAGCCGAAGACGAAGATAAGTCCGCGACCGGGATGGCAAGTGT
CGGTGCTGGACGGTCCCTGCAAGGCTCGGTAACGGCACTACCGACCTCTT
GTGACGAGCTATCAGCACAAATGGACCATGTCCTCGAGCATCTACGAACA
CTGCTCACGAACCCATCGCTGGGAGAAAATGGAAAGCCGGTGGAGCCAGG
CCGTTACGATGATGGATGGCTGGCATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_20290CAN33_20290Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20290-T1.exon1CAN33_20290-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_20290-T1.exon2CAN33_20290-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_20290-T1.exon3CAN33_20290-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_20290-T1.exon4CAN33_20290-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20290-T1.cdsCAN33_20290-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20290-T1CAN33_20290-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR021622
DBxrefPFAM:PF11559
ProductAfadin- and alpha -actinin-Binding family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2587394..2588524 +
Powered by Drupal