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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:2627639..2629672- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_20370-T1 ID=CAN33_20370-T1|Name=CAN33_20370-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2034bp|location=Sequence derived from alignment at NKJJ01000011.1:2627639..2629672- (Aspergillus niger FDAARGOS_311)
ATGCTGGGCGCTTTCCGCCGTTCCGGCGCCGTCCATGCGCTGCGAGCTTC
ACGATCTCTGCTGGCCAGATCGATTCCTCAGCAACCTCAATGGCTCTCTG
CTTCTGCACCGGCGGTCTCATACGTCGCTCGCGCCCTCTACCATCCGTCC
CCGGCTTTTCTTGATGCCACAGCAGCAGCTCAGGCGCAACTCAACGTCGC
CGCCGACATCGAGCCCCGGCTACCCAATTCCAAGTTCCACAGCCTGGCAC
AAGACGGCCTGGTCAACGACAGACTGATCCGGACCGTGACAAATTCCATG
AAGATTGAAACCATGACCGATGTTCAAGCTAAGACGATCCGTGAAACACT
GAGCGGCGATGATGTGTGAGTTCTTCTTCGTCTCTGCCTCCCTTCATTCA
CCTATCTGCAAATGGCGGCTGACCTTGATTTTTTCTTCCCATATAGCTTG
GCCCAGGCAAAGACCGGAACTGGAAAGACTCTTGCCTTCTTGATCCCGGT
CGTCCAGCGCCTTGTTAGTGATCCGTCAGTCAAACGCTCGCGCCCCTCAT
ACCGTGGACAACAAGGGAGGAGAAACACGCCCGATATTCGGGCGATTGTC
ATCTCTCCGACTCGTGAGTTGGCGGAACAGATTGCCCATGAGGCACAGCG
CTTGGTGTATGGACTGGGTTTGACCGTGCAGACGGCAGTCGGCGGTACTC
AAAAGAGATTGCATCTAAACAAGATCCGGAACGAGGGCTGCAATATCTTG
GTTGGAACTCCTGGTCGTCTGAAGGACCTTCTTTCCGATCCGTACAGCGG
TGTCACCGCGCCCCAGCTCCAAGCTCTCGTCTTCGACGAGGCTGATCGCT
TGCTGGATGATGGCTTCTCGCAAGAGATCGGTCAGATCAAGGACCTCCTG
CCCAACCCGGAGGAGGTCGACCGCCAGACCCTGATGTTCTCCGCCACCGT
CCCAGGTGAAGTCATGAACATGGTGCGTCAGACTATGAAGCCTGACTTCA
AGTTCATTAAGACTGTCTCGGAGGATGAGGTGCCCACCCACTTGCGGGTG
CCCCAGAAGGTCGTCTACCTGGATGGCTTCCAGAACGGCTTGCCTGCTAT
TCTGGAGCTGGCCAAGCAGGGTTACGTTAACTCCCCGAATTTCAAGGCCA
TTGTCTACCTGAACGCAACGACGATGGTCTCGCTGGCCAACGACATCTTC
AGGCGGCTTCAGAATGATCCTGAGGACCGTACCAAAGGACACGCTCTTGG
CCGCCTCCCTATTCTCCAAATCCATTCGCGACTGACTCAGGCGCAAAGAA
CTCGTGTTACGAGTACTTTCCGCAACGCGCGCTCCGGCATTCTCTTCTCT
TCCGACGTAACCGCCCGTGGTCTGGATTTCCCCGATGTCACGCACGTCAT
CCAATACGGACTCCCCAGCGAGCGTCAGACCTACATCCACCGCGTGGGAC
GTACTGGCCGTGCGAACAAGGAAGGTGAGGGCTGGATCTTGCTGCATAAC
AACGAGAAGCGTGCCTTCAAACAGATGTTGGGTGACCTGCCGATCGAGGA
GGATCAGACCACGATCCCCGTGGCGAAGGTCAACATGCGTGAAGAGATCG
AGGATGATGGCTCAGAGACGAGCCGAACTCTACAACAAATCAAATTGGCC
GCGCAGCAGGTTCCTATCGACGATCGCGTGGAGGCATGGAAGTCCCAAAC
GGGTACCATCATAGGCAAACTCCAACCTCTGTCGGCGACCCTCCCTGCAA
TGCATGACCTGTCCAAGTACGGATACGTGCTGCCCAAGCCTCCGCATCTC
CCTTCCAGAATCCAACAAGCTTTGGAGAAGGGCGATAGGCCTCCTCCAAG
GTCCAACCGTGGTGGGCCCCGGGATTCCTTCAGGTCCCGGGATTCCTACA
GGCCCCGTTCTAGCGGTGGCTATAATGACCGCTACCAACGCTCCTCATCC
CGCGACCGCGAGCCCCGCAACCCTTGGAACGAAAGAGGCTCCTCTCGCGG
CCGTCGCGAGAGCCGCTCCTACAACCGCTACTGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:2627639..2629672- >CAN33_20370-T1 ID=CAN33_20370-T1|Name=CAN33_20370-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3906bp|location=Sequence derived from alignment at NKJJ01000011.1:2627639..2629672- (Aspergillus niger FDAARGOS_311)
CTTGGCCCAGGCAAAGACCGGAACTGGAAAGACTCTTGCCTTCTTGATCC
CGGTCGTCCAGCGCCTTGTTAGTGATCCGTCAGTCAAACGCTCGCGCCCC
TCATACCGTGGACAACAAGGGAGGAGAAACACGCCCGATATTCGGGCGAT
TGTCATCTCTCCGACTCGTGAGTTGGCGGAACAGATTGCCCATGAGGCAC
AGCGCTTGGTGTATGGACTGGGTTTGACCGTGCAGACGGCAGTCGGCGGT
ACTCAAAAGAGATTGCATCTAAACAAGATCCGGAACGAGGGCTGCAATAT
CTTGGTTGGAACTCCTGGTCGTCTGAAGGACCTTCTTTCCGATCCGTACA
GCGGTGTCACCGCGCCCCAGCTCCAAGCTCTCGTCTTCGACGAGGCTGAT
CGCTTGCTGGATGATGGCTTCTCGCAAGAGATCGGTCAGATCAAGGACCT
CCTGCCCAACCCGGAGGAGGTCGACCGCCAGACCCTGATGTTCTCCGCCA
CCGTCCCAGGTGAAGTCATGAACATGGTGCGTCAGACTATGAAGCCTGAC
TTCAAGTTCATTAAGACTGTCTCGGAGGATGAGGTGCCCACCCACTTGCG
GGTGCCCCAGAAGGTCGTCTACCTGGATGGCTTCCAGAACGGCTTGCCTG
CTATTCTGGAGCTGGCCAAGCAGGGTTACGTTAACTCCCCGAATTTCAAG
GCCATTGTCTACCTGAACGCAACGACGATGGTCTCGCTGGCCAACGACAT
CTTCAGGCGGCTTCAGAATGATCCTGAGGACCGTACCAAAGGACACGCTC
TTGGCCGCCTCCCTATTCTCCAAATCCATTCGCGACTGACTCAGGCGCAA
AGAACTCGTGTTACGAGTACTTTCCGCAACGCGCGCTCCGGCATTCTCTT
CTCTTCCGACGTAACCGCCCGTGGTCTGGATTTCCCCGATGTCACGCACG
TCATCCAATACGGACTCCCCAGCGAGCGTCAGACCTACATCCACCGCGTG
GGACGTACTGGCCGTGCGAACAAGGAAGGTGAGGGCTGGATCTTGCTGCA
TAACAACGAGAAGCGTGCCTTCAAACAGATGTTGGGTGACCTGCCGATCG
AGGAGGATCAGACCACGATCCCCGTGGCGAAGGTCAACATGCGTGAAGAG
ATCGAGGATGATGGCTCAGAGACGAGCCGAACTCTACAACAAATCAAATT
GGCCGCGCAGCAGGTTCCTATCGACGATCGCGTGGAGGCATGGAAGTCCC
AAACGGGTACCATCATAGGCAAACTCCAACCTCTGTCGGCGACCCTCCCT
GCAATGCATGACCTGTCCAAGTACGGATACGTGCTGCCCAAGCCTCCGCA
TCTCCCTTCCAGAATCCAACAAGCTTTGGAGAAGGGCGATAGGCCTCCTC
CAAGGTCCAACCGTGGTGGGCCCCGGGATTCCTTCAGGTCCCGGGATTCC
TACAGGCCCCGTTCTAGCGGTGGCTATAATGACCGCTACCAACGCTCCTC
ATCCCGCGACCGCGAGCCCCGCAACCCTTGGAACGAAAGAGGCTCCTCTC
GCGGCCGTCGCGAGAGCCGCTCCTACAACCGCTACTGAATGCTGGGCGCT
TTCCGCCGTTCCGGCGCCGTCCATGCGCTGCGAGCTTCACGATCTCTGCT
GGCCAGATCGATTCCTCAGCAACCTCAATGGCTCTCTGCTTCTGCACCGG
CGGTCTCATACGTCGCTCGCGCCCTCTACCATCCGTCCCCGGCTTTTCTT
GATGCCACAGCAGCAGCTCAGGCGCAACTCAACGTCGCCGCCGACATCGA
GCCCCGGCTACCCAATTCCAAGTTCCACAGCCTGGCACAAGACGGCCTGG
TCAACGACAGACTGATCCGGACCGTGACAAATTCCATGAAGATTGAAACC
ATGACCGATGTTCAAGCTAAGACGATCCGTGAAACACTGAGCGGCGATGA
TGTCTTGGCCCAGGCAAAGACCGGAACTGGAAAGACTCTTGCCTTCTTGA
TCCCGGTCGTCCAGCGCCTTGTTAGTGATCCGTCAGTCAAACGCTCGCGC
CCCTCATACCGTGGACAACAAGGGAGGAGAAACACGCCCGATATTCGGGC
GATTGTCATCTCTCCGACTCGTGAGTTGGCGGAACAGATTGCCCATGAGG
CACAGCGCTTGGTGTATGGACTGGGTTTGACCGTGCAGACGGCAGTCGGC
GGTACTCAAAAGAGATTGCATCTAAACAAGATCCGGAACGAGGGCTGCAA
TATCTTGGTTGGAACTCCTGGTCGTCTGAAGGACCTTCTTTCCGATCCGT
ACAGCGGTGTCACCGCGCCCCAGCTCCAAGCTCTCGTCTTCGACGAGGCT
GATCGCTTGCTGGATGATGGCTTCTCGCAAGAGATCGGTCAGATCAAGGA
CCTCCTGCCCAACCCGGAGGAGGTCGACCGCCAGACCCTGATGTTCTCCG
CCACCGTCCCAGGTGAAGTCATGAACATGGTGCGTCAGACTATGAAGCCT
GACTTCAAGTTCATTAAGACTGTCTCGGAGGATGAGGTGCCCACCCACTT
GCGGGTGCCCCAGAAGGTCGTCTACCTGGATGGCTTCCAGAACGGCTTGC
CTGCTATTCTGGAGCTGGCCAAGCAGGGTTACGTTAACTCCCCGAATTTC
AAGGCCATTGTCTACCTGAACGCAACGACGATGGTCTCGCTGGCCAACGA
CATCTTCAGGCGGCTTCAGAATGATCCTGAGGACCGTACCAAAGGACACG
CTCTTGGCCGCCTCCCTATTCTCCAAATCCATTCGCGACTGACTCAGGCG
CAAAGAACTCGTGTTACGAGTACTTTCCGCAACGCGCGCTCCGGCATTCT
CTTCTCTTCCGACGTAACCGCCCGTGGTCTGGATTTCCCCGATGTCACGC
ACGTCATCCAATACGGACTCCCCAGCGAGCGTCAGACCTACATCCACCGC
GTGGGACGTACTGGCCGTGCGAACAAGGAAGGTGAGGGCTGGATCTTGCT
GCATAACAACGAGAAGCGTGCCTTCAAACAGATGTTGGGTGACCTGCCGA
TCGAGGAGGATCAGACCACGATCCCCGTGGCGAAGGTCAACATGCGTGAA
GAGATCGAGGATGATGGCTCAGAGACGAGCCGAACTCTACAACAAATCAA
ATTGGCCGCGCAGCAGGTTCCTATCGACGATCGCGTGGAGGCATGGAAGT
CCCAAACGGGTACCATCATAGGCAAACTCCAACCTCTGTCGGCGACCCTC
CCTGCAATGCATGACCTGTCCAAGTACGGATACGTGCTGCCCAAGCCTCC
GCATCTCCCTTCCAGAATCCAACAAGCTTTGGAGAAGGGCGATAGGCCTC
CTCCAAGGTCCAACCGTGGTGGGCCCCGGGATTCCTTCAGGTCCCGGGAT
TCCTACAGGCCCCGTTCTAGCGGTGGCTATAATGACCGCTACCAACGCTC
CTCATCCCGCGACCGCGAGCCCCGCAACCCTTGGAACGAAAGAGGCTCCT
CTCGCGGCCGTCGCGAGAGCCGCTCCTACAACCGCTACTGAATGCTGGGC
GCTTTCCGCCGTTCCGGCGCCGTCCATGCGCTGCGAGCTTCACGATCTCT
GCTGGCCAGATCGATTCCTCAGCAACCTCAATGGCTCTCTGCTTCTGCAC
CGGCGGTCTCATACGTCGCTCGCGCCCTCTACCATCCGTCCCCGGCTTTT
CTTGATGCCACAGCAGCAGCTCAGGCGCAACTCAACGTCGCCGCCGACAT
CGAGCCCCGGCTACCCAATTCCAAGTTCCACAGCCTGGCACAAGACGGCC
TGGTCAACGACAGACTGATCCGGACCGTGACAAATTCCATGAAGATTGAA
ACCATGACCGATGTTCAAGCTAAGACGATCCGTGAAACACTGAGCGGCGA
TGATGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR000629 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | DEAD/DEAH box helicase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:2627639..2629672 - |
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