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CAN33_20420-T1, CAN33_20420-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_20420-T1
Unique NameCAN33_20420-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2668319..2672014-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_20420-T1 ID=CAN33_20420-T1|Name=CAN33_20420-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=3696bp|location=Sequence derived from alignment at NKJJ01000011.1:2668319..2672014- (Aspergillus niger FDAARGOS_311)
ATGGACGACCTCCAGTCGCTGGAGCTCTTTTCGCTCGTGTCGCGGATCAC
GAGCGAAATCCAGAACCATCTCGGCGTCAACGACAAAACATTAGCGGAAT
TCGTCATCGACCAGCACCTAAAATGCGGCTCATTTGCGGATTTCAGCAAG
AGCATGGAGGAGATGGGCGCGGAGTTCCCTCGGAGTTTGCTGGAGAGTAT
TGATCGTCTGGTGCTCACAATGCATCCGAAGTATAAGTCGAAGAAGATGG
AAACGACGAATACCTCGGCCGGTGATGATGATATGGATGTTCTGGATGCG
TTAGAGAAGAAAGCGCGTGTGTTCAAGGGATTGGCCGTGCCGGATAAGGT
TCAGCAGTGGGATGAGGAGGATGTCGAGGAGGGCGATGCGAAGGCTGATG
CTATGGATGATACGTTTGCTATGCTGGAGGGATTGGCGGGTAAAGCACGT
CAGGAGAAACCTGCCCCGGCGCTGCAGTCATCGTCAAGAAATGACCGCGG
TAGTACTAGGAAGCGCAGCAGAAGCCCCGATTACGATGATCACCGACGTG
GACGCAGACGTCATGATAGATACCGGTCTCGATCGCGATCGCACAGTCCT
CGATATAGCAGGAAGGGTGGTGATGATGAGGTGGATGAATTTGGCCGGTC
AAAGAGTAAATACAGCAGCAGGGATGATTATCGCAATGGACACAGTGAGC
GGAAGAGTCGTCGGGACCGCGATGAGGATGGCGAGTATTTCCGGAAACCG
CCGCCTGTGGAGTTGGATGATCAGCCGGTGCTATACAAGGTCTACGATGG
TCGTGTCACGGGAGTGAAGGACTTTGGCGCCTTTGTGAACTTGCTTGGTG
TGAAAGGCAAGGTGGATGGCTTGGTACATGTTTCGGCTATGCAGGAAGGA
GCGCGTGTTAATCATCCTTCCGATTTGGTATCTCGCGGCCAGCCGGTTAA
GGTCAAGGTGGTTAGCATTCAAGGCTCTCGAATTGGGCTGTCGATGAAGG
AGGTGGATCAGGTTACTGGTCTTGATCTGATCCCTCAACGGCGTCTGGCG
TCCGGCGCAAATATGGAGCGTCTTGACGGCATGACCGGAAAGGACAGATA
TGGTAACCTGAGTTCGGAGGTGCCGGTTATTGAAGAGTCGGATGGAAAGC
CTATGAAAAATAGGAAGCGCATGACCTCTCCTGAGAGATGGGAGATCAAG
CAATTGATTGCATCCGGCGCTGTCTCCGCAGCAGACTATCCTGACATCGA
TGAGGAATACCATGCCACCCTGACAGGCGAAGGCACGTTTGAGGAAGAGG
AGGATGTCGATATTGAAGTCAGGGATGAGGAACCGCCTTTCCTGGCTGGT
CAGACTAAGATGTCTCTGGAACTCTCTCCGATTAGGGTCGTGAAGGCTCC
CGATGGCTCTATGAACCGGGCTGCGATGGCAGGAACTAATCTGGCCAAGG
AGCGACGAGATATCAGGCAGCAGGAAGCTCAGGACAAAGCAGCTGAGCAA
GCTGCGGCGGTCGACCTCAACGCGCAGTGGCAGGACCCCATGGTTGCGCC
TGAAGAGCGGAAATTCGCAGCTGATCTGCGGAGCACCCAGCAGTCCAAGC
CGGACGACTCGGTTCCCGAGTGGAAACGGGTCACGATGGGCAAGAACCAG
TCCTTCGGAAAGCGGACCAGCATGTCCATCAAACAGCAGCGTGAAAGTCT
GCCTGTCTACAAGTTCCGCAAGCAACTTCTCGATGCTGTACGCGACAATC
AGTTGTTGATTGTTGTCGGAGATACTGGGTCCGGAAAGACGACGCAGGTA
ACGCAGTATCTGGCTGAGGGAGGCTATGCAAACAACGGTATTATCGGTTG
TACGCAGCCTCGTCGTGTGGCAGCCATGTCTGTTGCCAAACGTGTGGCTG
AAGAAGTCGGCTGTAAACTCGGCGCGGAGGTTGGATACACGATTCGTTTC
GAAGATTGCACGAGTCCTGATACCAAGATCAAGTACATGACTGATGGTAT
GCTTCAAAGAGAAGTCCTTCTTGACCCGGATTTGAAGAAGTACTCTGTTA
TTATGCTTGACGAAGCTCACGAACGAACCATCGCCACGGATGTTCTCTTC
GGATTGCTCAAAAAGACCATCAAGCGAAGACCGGACCTCAGACTCATTGT
TACTTCGGCTACCCTGGATGCTGAGAAGTTCTCCGAGTACTTCAACGGTT
GCCCTATCTTCTCCATTCCTGGTCGTACGTTCCCTGTCGAGATCATGTAC
TCGAAGGAGCCCGAGTCCGACTATCTTGATGCGGCTCTCATCACAGTTAT
GCAAATTCACCTGACGGAGCCCTCGGGTGATATACTGCTCTTCTTGACAG
GACAAGAAGAAATCGATACTGCCTGCGAGATTCTATACGAGCGGATGAAG
GCTTTAGGGTCAACAGTACCAGAGTTGGTCATTCTTCCTGTCTACTCTGC
TCTTCCGAGTGAAATGCAAAGTAGGATTTTTGAGCCTGCGCCGCCAGGAG
GTAGGAAGGTTGTCATCGCCACAAACATTGCTGAGACATCCATTACCATC
GATAATATCTACTACGTCATCGATCCAGGTTTCGTCAAGCAGAACGCCTA
CGATCCCAAGCTGGGTATGGACTCTCTGGTAGTCACGCCCATCTCGCAGG
CCCAGGCGAAGCAACGTGCTGGCCGTGCAGGAAGAACCGGTCCCGGAAAA
TGCTTCCGGTTGTACACTGAAGCCGCATACCAGTCGGAGATGTTGCCAAC
CACGATCCCCGAAATTCAACGTCAGAACCTGTCACACACTATCCTCATGC
TCAAGGCGATGGGCATCAACGATTTGCTGCACTTCGACTTCATGGATCCT
CCGCCAACGAATACTATGCTTACTGCCTTGGAGGAACTGTATGCACTGTC
TGCTTTAGATGACGAGGGTCTCTTGACTCGCTTGGGCAGAAAGATGGCAG
ACTTCCCCATGGAGCCGGCCCTCGCCAAGGTTCTTATCGCATCGGTCGAC
ATGGGATGCTCGGAGGAGATGCTGAGCATTGTGGCCATGCTTTCCATTCA
GTCGGTCTTCTACCGTCCCAAGGAGAAGCAGCAGCAAGCGGATCAGAAGA
AGGCCAAGTTCCACGATCCCCATGGCGACCATTTGACCCTTCTCAACGTC
TATAACGGATGGAAACACTCCAACTTCAACAATGCCTGGTGCTTCGAGAA
CTTCATCCAGGCACGTCAGATTCGCCGTGCGCAGGACGTCCGTCAGCAGC
TGCTTGGTATCATGGATCGCTACCACCACAAGATCGTCTCTTGCGGAAGA
AACACCCTCAAAGTACGCCAGGCACTTTGTACCGGGTTCTTCCGAAATGC
AGCTCGCAAGGACCCTCAGGAAGGGTACAAGACTCTTGTCGAGGGCACAC
CGGTTTACATGCATCCCAGTTCGGCACTGTTTGGCAAACCCTCCGAGCAC
GTCATCTACCATACTCTTGTTCTTACGACGAAGGAGTACATGCACTGCAC
AACTTCCATCGAGCCCAAATGGCTTGTTGAGGCCGCTCCGACTTTCTTCA
AGGTGGCACCCACCGATCGTCTGTCGAAACGTAAGAAGGCCGAGCGGATT
CAGCCTCTCCACAACCGCTTTGCCGGCGAGGATGATTGGCGTCTATCCGC
ACAGAGACGGCAGGGCCGTGGTGGAGGTGGTGGTACCTGGGGTTGA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:2668319..2672014-

>CAN33_20420-T1 ID=CAN33_20420-T1|Name=CAN33_20420-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3696bp|location=Sequence derived from alignment at NKJJ01000011.1:2668319..2672014- (Aspergillus niger FDAARGOS_311)
ATGGACGACCTCCAGTCGCTGGAGCTCTTTTCGCTCGTGTCGCGGATCAC
GAGCGAAATCCAGAACCATCTCGGCGTCAACGACAAAACATTAGCGGAAT
TCGTCATCGACCAGCACCTAAAATGCGGCTCATTTGCGGATTTCAGCAAG
AGCATGGAGGAGATGGGCGCGGAGTTCCCTCGGAGTTTGCTGGAGAGTAT
TGATCGTCTGGTGCTCACAATGCATCCGAAGTATAAGTCGAAGAAGATGG
AAACGACGAATACCTCGGCCGGTGATGATGATATGGATGTTCTGGATGCG
TTAGAGAAGAAAGCGCGTGTGTTCAAGGGATTGGCCGTGCCGGATAAGGT
TCAGCAGTGGGATGAGGAGGATGTCGAGGAGGGCGATGCGAAGGCTGATG
CTATGGATGATACGTTTGCTATGCTGGAGGGATTGGCGGGTAAAGCACGT
CAGGAGAAACCTGCCCCGGCGCTGCAGTCATCGTCAAGAAATGACCGCGG
TAGTACTAGGAAGCGCAGCAGAAGCCCCGATTACGATGATCACCGACGTG
GACGCAGACGTCATGATAGATACCGGTCTCGATCGCGATCGCACAGTCCT
CGATATAGCAGGAAGGGTGGTGATGATGAGGTGGATGAATTTGGCCGGTC
AAAGAGTAAATACAGCAGCAGGGATGATTATCGCAATGGACACAGTGAGC
GGAAGAGTCGTCGGGACCGCGATGAGGATGGCGAGTATTTCCGGAAACCG
CCGCCTGTGGAGTTGGATGATCAGCCGGTGCTATACAAGGTCTACGATGG
TCGTGTCACGGGAGTGAAGGACTTTGGCGCCTTTGTGAACTTGCTTGGTG
TGAAAGGCAAGGTGGATGGCTTGGTACATGTTTCGGCTATGCAGGAAGGA
GCGCGTGTTAATCATCCTTCCGATTTGGTATCTCGCGGCCAGCCGGTTAA
GGTCAAGGTGGTTAGCATTCAAGGCTCTCGAATTGGGCTGTCGATGAAGG
AGGTGGATCAGGTTACTGGTCTTGATCTGATCCCTCAACGGCGTCTGGCG
TCCGGCGCAAATATGGAGCGTCTTGACGGCATGACCGGAAAGGACAGATA
TGGTAACCTGAGTTCGGAGGTGCCGGTTATTGAAGAGTCGGATGGAAAGC
CTATGAAAAATAGGAAGCGCATGACCTCTCCTGAGAGATGGGAGATCAAG
CAATTGATTGCATCCGGCGCTGTCTCCGCAGCAGACTATCCTGACATCGA
TGAGGAATACCATGCCACCCTGACAGGCGAAGGCACGTTTGAGGAAGAGG
AGGATGTCGATATTGAAGTCAGGGATGAGGAACCGCCTTTCCTGGCTGGT
CAGACTAAGATGTCTCTGGAACTCTCTCCGATTAGGGTCGTGAAGGCTCC
CGATGGCTCTATGAACCGGGCTGCGATGGCAGGAACTAATCTGGCCAAGG
AGCGACGAGATATCAGGCAGCAGGAAGCTCAGGACAAAGCAGCTGAGCAA
GCTGCGGCGGTCGACCTCAACGCGCAGTGGCAGGACCCCATGGTTGCGCC
TGAAGAGCGGAAATTCGCAGCTGATCTGCGGAGCACCCAGCAGTCCAAGC
CGGACGACTCGGTTCCCGAGTGGAAACGGGTCACGATGGGCAAGAACCAG
TCCTTCGGAAAGCGGACCAGCATGTCCATCAAACAGCAGCGTGAAAGTCT
GCCTGTCTACAAGTTCCGCAAGCAACTTCTCGATGCTGTACGCGACAATC
AGTTGTTGATTGTTGTCGGAGATACTGGGTCCGGAAAGACGACGCAGGTA
ACGCAGTATCTGGCTGAGGGAGGCTATGCAAACAACGGTATTATCGGTTG
TACGCAGCCTCGTCGTGTGGCAGCCATGTCTGTTGCCAAACGTGTGGCTG
AAGAAGTCGGCTGTAAACTCGGCGCGGAGGTTGGATACACGATTCGTTTC
GAAGATTGCACGAGTCCTGATACCAAGATCAAGTACATGACTGATGGTAT
GCTTCAAAGAGAAGTCCTTCTTGACCCGGATTTGAAGAAGTACTCTGTTA
TTATGCTTGACGAAGCTCACGAACGAACCATCGCCACGGATGTTCTCTTC
GGATTGCTCAAAAAGACCATCAAGCGAAGACCGGACCTCAGACTCATTGT
TACTTCGGCTACCCTGGATGCTGAGAAGTTCTCCGAGTACTTCAACGGTT
GCCCTATCTTCTCCATTCCTGGTCGTACGTTCCCTGTCGAGATCATGTAC
TCGAAGGAGCCCGAGTCCGACTATCTTGATGCGGCTCTCATCACAGTTAT
GCAAATTCACCTGACGGAGCCCTCGGGTGATATACTGCTCTTCTTGACAG
GACAAGAAGAAATCGATACTGCCTGCGAGATTCTATACGAGCGGATGAAG
GCTTTAGGGTCAACAGTACCAGAGTTGGTCATTCTTCCTGTCTACTCTGC
TCTTCCGAGTGAAATGCAAAGTAGGATTTTTGAGCCTGCGCCGCCAGGAG
GTAGGAAGGTTGTCATCGCCACAAACATTGCTGAGACATCCATTACCATC
GATAATATCTACTACGTCATCGATCCAGGTTTCGTCAAGCAGAACGCCTA
CGATCCCAAGCTGGGTATGGACTCTCTGGTAGTCACGCCCATCTCGCAGG
CCCAGGCGAAGCAACGTGCTGGCCGTGCAGGAAGAACCGGTCCCGGAAAA
TGCTTCCGGTTGTACACTGAAGCCGCATACCAGTCGGAGATGTTGCCAAC
CACGATCCCCGAAATTCAACGTCAGAACCTGTCACACACTATCCTCATGC
TCAAGGCGATGGGCATCAACGATTTGCTGCACTTCGACTTCATGGATCCT
CCGCCAACGAATACTATGCTTACTGCCTTGGAGGAACTGTATGCACTGTC
TGCTTTAGATGACGAGGGTCTCTTGACTCGCTTGGGCAGAAAGATGGCAG
ACTTCCCCATGGAGCCGGCCCTCGCCAAGGTTCTTATCGCATCGGTCGAC
ATGGGATGCTCGGAGGAGATGCTGAGCATTGTGGCCATGCTTTCCATTCA
GTCGGTCTTCTACCGTCCCAAGGAGAAGCAGCAGCAAGCGGATCAGAAGA
AGGCCAAGTTCCACGATCCCCATGGCGACCATTTGACCCTTCTCAACGTC
TATAACGGATGGAAACACTCCAACTTCAACAATGCCTGGTGCTTCGAGAA
CTTCATCCAGGCACGTCAGATTCGCCGTGCGCAGGACGTCCGTCAGCAGC
TGCTTGGTATCATGGATCGCTACCACCACAAGATCGTCTCTTGCGGAAGA
AACACCCTCAAAGTACGCCAGGCACTTTGTACCGGGTTCTTCCGAAATGC
AGCTCGCAAGGACCCTCAGGAAGGGTACAAGACTCTTGTCGAGGGCACAC
CGGTTTACATGCATCCCAGTTCGGCACTGTTTGGCAAACCCTCCGAGCAC
GTCATCTACCATACTCTTGTTCTTACGACGAAGGAGTACATGCACTGCAC
AACTTCCATCGAGCCCAAATGGCTTGTTGAGGCCGCTCCGACTTTCTTCA
AGGTGGCACCCACCGATCGTCTGTCGAAACGTAAGAAGGCCGAGCGGATT
CAGCCTCTCCACAACCGCTTTGCCGGCGAGGATGATTGGCGTCTATCCGC
ACAGAGACGGCAGGGCCGTGGTGGAGGTGGTGGTACCTGGGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004386helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_20420CAN33_20420Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20420-T1.cdsCAN33_20420-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20420-T1.exon1CAN33_20420-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20420-T1CAN33_20420-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR002464
DBxrefInterPro:IPR011709
DBxrefInterPro:IPR003029
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR022967
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR007502
DBxrefPFAM:PF00575
DBxrefPFAM:PF07717
DBxrefPFAM:PF00271
DBxrefPFAM:PF04408
ProductHelicase associated domain (HA2) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2668319..2672014 -
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