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CAN33_20435-T1, CAN33_20435-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_20435-T1
Unique NameCAN33_20435-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2680953..2682293-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_20435-T1 ID=CAN33_20435-T1|Name=CAN33_20435-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1341bp|location=Sequence derived from alignment at NKJJ01000011.1:2680953..2682293- (Aspergillus niger FDAARGOS_311)
ATGCCTGCTGGATCAGTTCTTGTCACCGGGTAAGCTTCTAATCAATGCCT
TTGTCTCTCTAACGCACCCGCTGACCCCGCAATTCTCCCCAAACAGTGGA
ACGGGCTACATTGGCTCTTTCACCACCCTCGCTCTCCTCGAGGCTGGCTA
CAAGGTCGTCGTCGCTGACAACCTCTACAACTCCTCTGCTGAGGCTCTCA
AGCGCATTGAGTTGATCAGCGGCAAGAAGGCCGAGTTCGCTCAGCTCGAT
GTCACCGACGAGGCTGGCTTTGACCGTGTCTTCGAGGCTCACCCCGACAT
TGACAGCGTTATCCACTTTGCTGCTCTGAAGGTGCGCTTTCCCTCTAACG
TCTTCCTCCATATGCCTCAATCTACCTCTCTGCATATCTCTTGCGCATCA
AATGGAGGGTTCCTGGCTGACAGCTATCTAGGCCGTCGGTGAGTCCGGTG
AGAAGCCTCTGGACTACTACCACGTCAACGTCTACGGCACCATCTGCCTC
CTGCGCTCCATGGTCCGCCACAATGTCACCAACATCGTCTTCTCCAGCTC
CGCCACCGTCTACGGTGATGCCACTCGCTTCCCCAACATGATCCCCATCC
CTGAGGAGTGCCCTCTGGGTCCCACCAACCCCTACGGCAACACCAAGTTC
GCCGTCGAGACTGCCATCACCGATGTCATCAACGCTCAGCGCAACAACGC
CATCAAGGCCGGCAACGAGGCCGAGGCCCAGAAGTGGAACGGTGCCCTGC
TCCGCTACTTCAACCCCGCCGGTGCTCACCCCTCTGGTATCATGGGTGAG
GACCCCCAGGGTGTCCCCTACAACCTGCTTCCCCTCCTTGCCCAGGTGGC
CACCGGCAAGCGCGAGAAGCTGCTCGTCTTCGGAGATGGTACGTTACCTC
TTGCAGTAGAACTTGAAATTCTCAGCACCTAAACTAACTGGGTCAGACTA
CGCCTCCCACGACGGAACCGCCATCCGCGACTACATCCACATCCTCGACC
TGGCGGATGGTCACTTGAAGGCCCTGAACTACCTCCGCGCCAACAACCCC
GGAGTCCGTGCCTGGAACTTGGGTACCGGCAAGGGCAGCACTGTCTACGA
GATGATCCGTGCCTTCTCGGCGGCCGTGGGCCGTGACCTCCCCTACGAGG
TTGCTCCCCGCCGTGCTGGTGACGTCCTCAACCTGACCTCCAACCCCACG
CGCGCCAACAACGAGCTGGGCTGGAAGGCCGAGCGCACCCTCGAGCAGGC
CTGTGAGGACCTCTGGCTGTGGACCCGCAACAACCCCCAGGGTTACCGCC
AACAGCCCCCGGCCGAGCTGCTGGAGAAGCTGCAGAAATAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:2680953..2682293-

>CAN33_20435-T1 ID=CAN33_20435-T1|Name=CAN33_20435-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4464bp|location=Sequence derived from alignment at NKJJ01000011.1:2680953..2682293- (Aspergillus niger FDAARGOS_311)
ACTACGCCTCCCACGACGGAACCGCCATCCGCGACTACATCCACATCCTC
GACCTGGCGGATGGTCACTTGAAGGCCCTGAACTACCTCCGCGCCAACAA
CCCCGGAGTCCGTGCCTGGAACTTGGGTACCGGCAAGGGCAGCACTGTCT
ACGAGATGATCCGTGCCTTCTCGGCGGCCGTGGGCCGTGACCTCCCCTAC
GAGGTTGCTCCCCGCCGTGCTGGTGACGTCCTCAACCTGACCTCCAACCC
CACGCGCGCCAACAACGAGCTGGGCTGGAAGGCCGAGCGCACCCTCGAGC
AGGCCTGTGAGGACCTCTGGCTGTGGACCCGCAACAACCCCCAGGGTTAC
CGCCAACAGCCCCCGGCCGAGCTGCTGGAGAAGCTGCAGAAATAAGCCGT
CGGTGAGTCCGGTGAGAAGCCTCTGGACTACTACCACGTCAACGTCTACG
GCACCATCTGCCTCCTGCGCTCCATGGTCCGCCACAATGTCACCAACATC
GTCTTCTCCAGCTCCGCCACCGTCTACGGTGATGCCACTCGCTTCCCCAA
CATGATCCCCATCCCTGAGGAGTGCCCTCTGGGTCCCACCAACCCCTACG
GCAACACCAAGTTCGCCGTCGAGACTGCCATCACCGATGTCATCAACGCT
CAGCGCAACAACGCCATCAAGGCCGGCAACGAGGCCGAGGCCCAGAAGTG
GAACGGTGCCCTGCTCCGCTACTTCAACCCCGCCGGTGCTCACCCCTCTG
GTATCATGGGTGAGGACCCCCAGGGTGTCCCCTACAACCTGCTTCCCCTC
CTTGCCCAGGTGGCCACCGGCAAGCGCGAGAAGCTGCTCGTCTTCGGAGA
TGTGGAACGGGCTACATTGGCTCTTTCACCACCCTCGCTCTCCTCGAGGC
TGGCTACAAGGTCGTCGTCGCTGACAACCTCTACAACTCCTCTGCTGAGG
CTCTCAAGCGCATTGAGTTGATCAGCGGCAAGAAGGCCGAGTTCGCTCAG
CTCGATGTCACCGACGAGGCTGGCTTTGACCGTGTCTTCGAGGCTCACCC
CGACATTGACAGCGTTATCCACTTTGCTGCTCTGAAGATGCCTGCTGGAT
CAGTTCTTGTCACCGGACTACGCCTCCCACGACGGAACCGCCATCCGCGA
CTACATCCACATCCTCGACCTGGCGGATGGTCACTTGAAGGCCCTGAACT
ACCTCCGCGCCAACAACCCCGGAGTCCGTGCCTGGAACTTGGGTACCGGC
AAGGGCAGCACTGTCTACGAGATGATCCGTGCCTTCTCGGCGGCCGTGGG
CCGTGACCTCCCCTACGAGGTTGCTCCCCGCCGTGCTGGTGACGTCCTCA
ACCTGACCTCCAACCCCACGCGCGCCAACAACGAGCTGGGCTGGAAGGCC
GAGCGCACCCTCGAGCAGGCCTGTGAGGACCTCTGGCTGTGGACCCGCAA
CAACCCCCAGGGTTACCGCCAACAGCCCCCGGCCGAGCTGCTGGAGAAGC
TGCAGAAATAAGCCGTCGGTGAGTCCGGTGAGAAGCCTCTGGACTACTAC
CACGTCAACGTCTACGGCACCATCTGCCTCCTGCGCTCCATGGTCCGCCA
CAATGTCACCAACATCGTCTTCTCCAGCTCCGCCACCGTCTACGGTGATG
CCACTCGCTTCCCCAACATGATCCCCATCCCTGAGGAGTGCCCTCTGGGT
CCCACCAACCCCTACGGCAACACCAAGTTCGCCGTCGAGACTGCCATCAC
CGATGTCATCAACGCTCAGCGCAACAACGCCATCAAGGCCGGCAACGAGG
CCGAGGCCCAGAAGTGGAACGGTGCCCTGCTCCGCTACTTCAACCCCGCC
GGTGCTCACCCCTCTGGTATCATGGGTGAGGACCCCCAGGGTGTCCCCTA
CAACCTGCTTCCCCTCCTTGCCCAGGTGGCCACCGGCAAGCGCGAGAAGC
TGCTCGTCTTCGGAGATGTGGAACGGGCTACATTGGCTCTTTCACCACCC
TCGCTCTCCTCGAGGCTGGCTACAAGGTCGTCGTCGCTGACAACCTCTAC
AACTCCTCTGCTGAGGCTCTCAAGCGCATTGAGTTGATCAGCGGCAAGAA
GGCCGAGTTCGCTCAGCTCGATGTCACCGACGAGGCTGGCTTTGACCGTG
TCTTCGAGGCTCACCCCGACATTGACAGCGTTATCCACTTTGCTGCTCTG
AAGATGCCTGCTGGATCAGTTCTTGTCACCGGACTACGCCTCCCACGACG
GAACCGCCATCCGCGACTACATCCACATCCTCGACCTGGCGGATGGTCAC
TTGAAGGCCCTGAACTACCTCCGCGCCAACAACCCCGGAGTCCGTGCCTG
GAACTTGGGTACCGGCAAGGGCAGCACTGTCTACGAGATGATCCGTGCCT
TCTCGGCGGCCGTGGGCCGTGACCTCCCCTACGAGGTTGCTCCCCGCCGT
GCTGGTGACGTCCTCAACCTGACCTCCAACCCCACGCGCGCCAACAACGA
GCTGGGCTGGAAGGCCGAGCGCACCCTCGAGCAGGCCTGTGAGGACCTCT
GGCTGTGGACCCGCAACAACCCCCAGGGTTACCGCCAACAGCCCCCGGCC
GAGCTGCTGGAGAAGCTGCAGAAATAAGCCGTCGGTGAGTCCGGTGAGAA
GCCTCTGGACTACTACCACGTCAACGTCTACGGCACCATCTGCCTCCTGC
GCTCCATGGTCCGCCACAATGTCACCAACATCGTCTTCTCCAGCTCCGCC
ACCGTCTACGGTGATGCCACTCGCTTCCCCAACATGATCCCCATCCCTGA
GGAGTGCCCTCTGGGTCCCACCAACCCCTACGGCAACACCAAGTTCGCCG
TCGAGACTGCCATCACCGATGTCATCAACGCTCAGCGCAACAACGCCATC
AAGGCCGGCAACGAGGCCGAGGCCCAGAAGTGGAACGGTGCCCTGCTCCG
CTACTTCAACCCCGCCGGTGCTCACCCCTCTGGTATCATGGGTGAGGACC
CCCAGGGTGTCCCCTACAACCTGCTTCCCCTCCTTGCCCAGGTGGCCACC
GGCAAGCGCGAGAAGCTGCTCGTCTTCGGAGATGTGGAACGGGCTACATT
GGCTCTTTCACCACCCTCGCTCTCCTCGAGGCTGGCTACAAGGTCGTCGT
CGCTGACAACCTCTACAACTCCTCTGCTGAGGCTCTCAAGCGCATTGAGT
TGATCAGCGGCAAGAAGGCCGAGTTCGCTCAGCTCGATGTCACCGACGAG
GCTGGCTTTGACCGTGTCTTCGAGGCTCACCCCGACATTGACAGCGTTAT
CCACTTTGCTGCTCTGAAGATGCCTGCTGGATCAGTTCTTGTCACCGGAC
TACGCCTCCCACGACGGAACCGCCATCCGCGACTACATCCACATCCTCGA
CCTGGCGGATGGTCACTTGAAGGCCCTGAACTACCTCCGCGCCAACAACC
CCGGAGTCCGTGCCTGGAACTTGGGTACCGGCAAGGGCAGCACTGTCTAC
GAGATGATCCGTGCCTTCTCGGCGGCCGTGGGCCGTGACCTCCCCTACGA
GGTTGCTCCCCGCCGTGCTGGTGACGTCCTCAACCTGACCTCCAACCCCA
CGCGCGCCAACAACGAGCTGGGCTGGAAGGCCGAGCGCACCCTCGAGCAG
GCCTGTGAGGACCTCTGGCTGTGGACCCGCAACAACCCCCAGGGTTACCG
CCAACAGCCCCCGGCCGAGCTGCTGGAGAAGCTGCAGAAATAAGCCGTCG
GTGAGTCCGGTGAGAAGCCTCTGGACTACTACCACGTCAACGTCTACGGC
ACCATCTGCCTCCTGCGCTCCATGGTCCGCCACAATGTCACCAACATCGT
CTTCTCCAGCTCCGCCACCGTCTACGGTGATGCCACTCGCTTCCCCAACA
TGATCCCCATCCCTGAGGAGTGCCCTCTGGGTCCCACCAACCCCTACGGC
AACACCAAGTTCGCCGTCGAGACTGCCATCACCGATGTCATCAACGCTCA
GCGCAACAACGCCATCAAGGCCGGCAACGAGGCCGAGGCCCAGAAGTGGA
ACGGTGCCCTGCTCCGCTACTTCAACCCCGCCGGTGCTCACCCCTCTGGT
ATCATGGGTGAGGACCCCCAGGGTGTCCCCTACAACCTGCTTCCCCTCCT
TGCCCAGGTGGCCACCGGCAAGCGCGAGAAGCTGCTCGTCTTCGGAGATG
TGGAACGGGCTACATTGGCTCTTTCACCACCCTCGCTCTCCTCGAGGCTG
GCTACAAGGTCGTCGTCGCTGACAACCTCTACAACTCCTCTGCTGAGGCT
CTCAAGCGCATTGAGTTGATCAGCGGCAAGAAGGCCGAGTTCGCTCAGCT
CGATGTCACCGACGAGGCTGGCTTTGACCGTGTCTTCGAGGCTCACCCCG
ACATTGACAGCGTTATCCACTTTGCTGCTCTGAAGATGCCTGCTGGATCA
GTTCTTGTCACCGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003978UDP-glucose 4-epimerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006012galactose metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_20435CAN33_20435Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20435-T1CAN33_20435-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20435-T1.cdsCAN33_20435-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20435-T1.exon4CAN33_20435-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_20435-T1.exon3CAN33_20435-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_20435-T1.exon2CAN33_20435-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_20435-T1.exon1CAN33_20435-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR005886
DBxrefInterPro:IPR016040
DBxrefPFAM:PF04321
DBxrefPFAM:PF08659
DBxrefPFAM:PF16363
DBxrefPFAM:PF01370
DBxrefPFAM:PF00106
DBxrefPFAM:PF01073
ProductUDP-glucose 4-epimerase GalE
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2680953..2682293 -
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