You are here

Home

CAN33_20500-T1, CAN33_20500-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_20500-T1
Unique NameCAN33_20500-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2722491..2724506+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_20500-T1 ID=CAN33_20500-T1|Name=CAN33_20500-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2016bp|location=Sequence derived from alignment at NKJJ01000011.1:2722491..2724506+ (Aspergillus niger FDAARGOS_311)
ATGAATCCCGGATCACTGCCCGATGGGCCCAGCCACGACGCAAAACATCC
CAAGAAGCTGATCTGTACGTCGTCGCAAGACATCTCAAGGAGAACCTATC
ACTCACCACATATCTAGTCGCTCCAGGAGACATCCAGACTACGCCCGAGC
CAAAAATCACCCCCACCGAGACGCCCGATCCCTCTGCTACAGCCACCGGA
GTCACAACAGCACCAGCACCCATCTCTCGTCTCGCCGCAGAAGCCCTTCG
CTCGAACGCATCGACCCCCGACTCGGTGACTGAAAATGAGATCGTTTCCC
ACCCTGCCCGCGCTCACCAGTTCGTGAGCAACCCACCCCTCACTATCTCC
CAGATGCACCCGACCAACCCTCTCCACCAATTCCACAACTGGTTCCGCGA
TCCCCGTCTCCTTCCGTCGTCCGCACCTGAAACCTGCACCCTCGCTACAG
CCAGCATGCCCTCCGGTCGGGTGAGCGCCCGTGTCGTATACCTCAAGGAA
CTGGATGAGCGAGGCTGGGTAGTTTACAGTAACTGGGGCAGTCGAGAAGG
CAAGGGCGGACAAGTATTTGGCAATCACGCAGACGGCGAGGACACGCTCA
GCGCCATGCCCGAACCCGGCCAGGACGAGTCTCTTCAAGCCGGACTACAA
GAGGGCAACAAATGGGCGGCATTGACATTCTGCTGGTCGAATCTGGAACG
TCAGGTGCGCATCGAGGGTCTCGTCGAGCCGCTCAGTCGCGATGAGAGTG
AAATGTACTGGCGTACTCGGGAACGAGGGAGCCAGATCGGAGCTTGGGCG
AGCTGGCAGAGCAAGGTGCTGTGGTCTATGGAGCCGGAGCTGCTTCTGGA
TCGTCGGCGCAAGAGCTTGGATCCGACTTTGTGTCCGCAGATGCAGGTCC
CCGGGGATGTGGACGCGACGGACATCGACGATGGGCGGGCGCTGTTGGAG
AAGCGGGTCAAGGAGATGGAGGAACGGTTTGCGGGGGTCGAGCAGATCCC
TCTGCCTCCGTTTTGGGGAGGAGTGCGCTTGGTCCCTGAGTCGGTGGAGT
TCTGGCAGGGTCGGCGCAGTCGGTTGCATGACCGATTCCGGTATGTGAGG
GTGCATAAGGAGGACGGAGAGGAAGGGGGGTATATATGGCGGATTCAGAG
GCTGTCGCCATGAGCGACACAGTTTAATAATTACTATTATAAAGGCTATA
CATGAATAATATTGTTACGAGCTTAGCCACTAGCAGTTGACATCGACTTC
GCTATACTCCGGACACTGTATACAATAGCTATCGCCCCCATCTGGCAGCA
GCCAAGACCTACCTTATCGATAGGAGAGCAACCTCACCTCCCAATTTCCC
CAGATATTATCGCACCTAAGTCCTCCTCTACCCTATACTACATACATTAC
ACAGTTCAATCACACCTTCCAACACACTACATACCAATACATTCAACATG
TCCGAACCCCAATCCCCATCCCAAGAGCCCCAATCACACCCCAACCCAGA
ACAACAACAACAACAACAACAAAAGCCACACCAAACCAAATGGCTCCTCC
TCGCCCTCTCCAGCGGCGCCTTCGCAGCCCTTAACGGCCTCTTCGCAAAG
CTGTAAACGATCCTTCTCCTCCCTAATTCCTCCCCATGAACATTGCTAAT
GAAAGACCCAGAACAACCGACACTGCCACCACCACCTTCGCTGCACACCT
CATCCACCTCTTCACCTCCGCCAACAACATCTCCGACGCAGACCTTATAT
CCTCTCACCCTATCCTCATGCTCCTAATCCGCGGCCTCTGTTTCGGTCTC
AACATCCTTAGCAACATCATCATGTGGGCGTTGTTCACGCGCGCCCTGAC
GGCGGGGTCCTCCACCACGAAGGTGTTGATTACCAATACCGCGGCTAATT
TTCTGGTTACGGCTATGCTAGGCATGGGGGTCTTTGGGGAGAGGGTCGGC
GGGTGGTGGTGGGTTGGGGCCGCGATGATGGGAGTAGGTTGTGTTATTGT
TGGGAGGAGGGATTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:2722491..2724506+

>CAN33_20500-T1 ID=CAN33_20500-T1|Name=CAN33_20500-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4176bp|location=Sequence derived from alignment at NKJJ01000011.1:2722491..2724506+ (Aspergillus niger FDAARGOS_311)
ATGAATCCCGGATCACTGCCCGATGGGCCCAGCCACGACGCAAAACATCC
CAAGAAGCTGATCTTCGCTCCAGGAGACATCCAGACTACGCCCGAGCCAA
AAATCACCCCCACCGAGACGCCCGATCCCTCTGCTACAGCCACCGGAGTC
ACAACAGCACCAGCACCCATCTCTCGTCTCGCCGCAGAAGCCCTTCGCTC
GAACGCATCGACCCCCGACTCGGTGACTGAAAATGAGATCGTTTCCCACC
CTGCCCGCGCTCACCAGTTCGTGAGCAACCCACCCCTCACTATCTCCCAG
ATGCACCCGACCAACCCTCTCCACCAATTCCACAACTGGTTCCGCGATCC
CCGTCTCCTTCCGTCGTCCGCACCTGAAACCTGCACCCTCGCTACAGCCA
GCATGCCCTCCGGTCGGGTGAGCGCCCGTGTCGTATACCTCAAGGAACTG
GATGAGCGAGGCTGGGTAGTTTACAGTAACTGGGGCAGTCGAGAAGGCAA
GGGCGGACAAGTATTTGGCAATCACGCAGACGGCGAGGACACGCTCAGCG
CCATGCCCGAACCCGGCCAGGACGAGTCTCTTCAAGCCGGACTACAAGAG
GGCAACAAATGGGCGGCATTGACATTCTGCTGGTCGAATCTGGAACGTCA
GGTGCGCATCGAGGGTCTCGTCGAGCCGCTCAGTCGCGATGAGAGTGAAA
TGTACTGGCGTACTCGGGAACGAGGGAGCCAGATCGGAGCTTGGGCGAGC
TGGCAGAGCAAGGTGCTGTGGTCTATGGAGCCGGAGCTGCTTCTGGATCG
TCGGCGCAAGAGCTTGGATCCGACTTTGTGTCCGCAGATGCAGGTCCCCG
GGGATGTGGACGCGACGGACATCGACGATGGGCGGGCGCTGTTGGAGAAG
CGGGTCAAGGAGATGGAGGAACGGTTTGCGGGGGTCGAGCAGATCCCTCT
GCCTCCGTTTTGGGGAGGAGTGCGCTTGGTCCCTGAGTCGGTGGAGTTCT
GGCAGGGTCGGCGCAGTCGGTTGCATGACCGATTCCGAACAACCGACACT
GCCACCACCACCTTCGCTGCACACCTCATCCACCTCTTCACCTCCGCCAA
CAACATCTCCGACGCAGACCTTATATCCTCTCACCCTATCCTCATGCTCC
TAATCCGCGGCCTCTGTTTCGGTCTCAACATCCTTAGCAACATCATCATG
TGGGCGTTGTTCACGCGCGCCCTGACGGCGGGGTCCTCCACCACGAAGGT
GTTGATTACCAATACCGCGGCTAATTTTCTGGTTACGGCTATGCTAGGCA
TGGGGGTCTTTGGGGAGAGGGTCGGCGGGTGGTGGTGGGTTGGGGCCGCG
ATGATGGGAGTAGGTTGTGTTATTGTTGGGAGGAGGGATTAGATGAATCC
CGGATCACTGCCCGATGGGCCCAGCCACGACGCAAAACATCCCAAGAAGC
TGATCTTCGCTCCAGGAGACATCCAGACTACGCCCGAGCCAAAAATCACC
CCCACCGAGACGCCCGATCCCTCTGCTACAGCCACCGGAGTCACAACAGC
ACCAGCACCCATCTCTCGTCTCGCCGCAGAAGCCCTTCGCTCGAACGCAT
CGACCCCCGACTCGGTGACTGAAAATGAGATCGTTTCCCACCCTGCCCGC
GCTCACCAGTTCGTGAGCAACCCACCCCTCACTATCTCCCAGATGCACCC
GACCAACCCTCTCCACCAATTCCACAACTGGTTCCGCGATCCCCGTCTCC
TTCCGTCGTCCGCACCTGAAACCTGCACCCTCGCTACAGCCAGCATGCCC
TCCGGTCGGGTGAGCGCCCGTGTCGTATACCTCAAGGAACTGGATGAGCG
AGGCTGGGTAGTTTACAGTAACTGGGGCAGTCGAGAAGGCAAGGGCGGAC
AAGTATTTGGCAATCACGCAGACGGCGAGGACACGCTCAGCGCCATGCCC
GAACCCGGCCAGGACGAGTCTCTTCAAGCCGGACTACAAGAGGGCAACAA
ATGGGCGGCATTGACATTCTGCTGGTCGAATCTGGAACGTCAGGTGCGCA
TCGAGGGTCTCGTCGAGCCGCTCAGTCGCGATGAGAGTGAAATGTACTGG
CGTACTCGGGAACGAGGGAGCCAGATCGGAGCTTGGGCGAGCTGGCAGAG
CAAGGTGCTGTGGTCTATGGAGCCGGAGCTGCTTCTGGATCGTCGGCGCA
AGAGCTTGGATCCGACTTTGTGTCCGCAGATGCAGGTCCCCGGGGATGTG
GACGCGACGGACATCGACGATGGGCGGGCGCTGTTGGAGAAGCGGGTCAA
GGAGATGGAGGAACGGTTTGCGGGGGTCGAGCAGATCCCTCTGCCTCCGT
TTTGGGGAGGAGTGCGCTTGGTCCCTGAGTCGGTGGAGTTCTGGCAGGGT
CGGCGCAGTCGGTTGCATGACCGATTCCGAACAACCGACACTGCCACCAC
CACCTTCGCTGCACACCTCATCCACCTCTTCACCTCCGCCAACAACATCT
CCGACGCAGACCTTATATCCTCTCACCCTATCCTCATGCTCCTAATCCGC
GGCCTCTGTTTCGGTCTCAACATCCTTAGCAACATCATCATGTGGGCGTT
GTTCACGCGCGCCCTGACGGCGGGGTCCTCCACCACGAAGGTGTTGATTA
CCAATACCGCGGCTAATTTTCTGGTTACGGCTATGCTAGGCATGGGGGTC
TTTGGGGAGAGGGTCGGCGGGTGGTGGTGGGTTGGGGCCGCGATGATGGG
AGTAGGTTGTGTTATTGTTGGGAGGAGGGATTAGATGAATCCCGGATCAC
TGCCCGATGGGCCCAGCCACGACGCAAAACATCCCAAGAAGCTGATCTTC
GCTCCAGGAGACATCCAGACTACGCCCGAGCCAAAAATCACCCCCACCGA
GACGCCCGATCCCTCTGCTACAGCCACCGGAGTCACAACAGCACCAGCAC
CCATCTCTCGTCTCGCCGCAGAAGCCCTTCGCTCGAACGCATCGACCCCC
GACTCGGTGACTGAAAATGAGATCGTTTCCCACCCTGCCCGCGCTCACCA
GTTCGTGAGCAACCCACCCCTCACTATCTCCCAGATGCACCCGACCAACC
CTCTCCACCAATTCCACAACTGGTTCCGCGATCCCCGTCTCCTTCCGTCG
TCCGCACCTGAAACCTGCACCCTCGCTACAGCCAGCATGCCCTCCGGTCG
GGTGAGCGCCCGTGTCGTATACCTCAAGGAACTGGATGAGCGAGGCTGGG
TAGTTTACAGTAACTGGGGCAGTCGAGAAGGCAAGGGCGGACAAGTATTT
GGCAATCACGCAGACGGCGAGGACACGCTCAGCGCCATGCCCGAACCCGG
CCAGGACGAGTCTCTTCAAGCCGGACTACAAGAGGGCAACAAATGGGCGG
CATTGACATTCTGCTGGTCGAATCTGGAACGTCAGGTGCGCATCGAGGGT
CTCGTCGAGCCGCTCAGTCGCGATGAGAGTGAAATGTACTGGCGTACTCG
GGAACGAGGGAGCCAGATCGGAGCTTGGGCGAGCTGGCAGAGCAAGGTGC
TGTGGTCTATGGAGCCGGAGCTGCTTCTGGATCGTCGGCGCAAGAGCTTG
GATCCGACTTTGTGTCCGCAGATGCAGGTCCCCGGGGATGTGGACGCGAC
GGACATCGACGATGGGCGGGCGCTGTTGGAGAAGCGGGTCAAGGAGATGG
AGGAACGGTTTGCGGGGGTCGAGCAGATCCCTCTGCCTCCGTTTTGGGGA
GGAGTGCGCTTGGTCCCTGAGTCGGTGGAGTTCTGGCAGGGTCGGCGCAG
TCGGTTGCATGACCGATTCCGAACAACCGACACTGCCACCACCACCTTCG
CTGCACACCTCATCCACCTCTTCACCTCCGCCAACAACATCTCCGACGCA
GACCTTATATCCTCTCACCCTATCCTCATGCTCCTAATCCGCGGCCTCTG
TTTCGGTCTCAACATCCTTAGCAACATCATCATGTGGGCGTTGTTCACGC
GCGCCCTGACGGCGGGGTCCTCCACCACGAAGGTGTTGATTACCAATACC
GCGGCTAATTTTCTGGTTACGGCTATGCTAGGCATGGGGGTCTTTGGGGA
GAGGGTCGGCGGGTGGTGGTGGGTTGGGGCCGCGATGATGGGAGTAGGTT
GTGTTATTGTTGGGAGGAGGGATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016638oxidoreductase activity, acting on the CH-NH2 group of donors
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_20500CAN33_20500Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20500-T1.exon1CAN33_20500-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_20500-T1.exon2CAN33_20500-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_20500-T1.exon3CAN33_20500-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20500-T1.cdsCAN33_20500-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20500-T1CAN33_20500-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264ZXA
DBxrefInterPro:IPR019740
DBxrefInterPro:IPR000620
DBxrefInterPro:IPR019576
DBxrefPFAM:PF10590
DBxrefPFAM:PF00892
ProductPyridoxine 5'-phosphate oxidase C-terminal dimerization region family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2722491..2724506 +
Powered by Drupal