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CAN33_20535-T1, CAN33_20535-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_20535-T1
Unique NameCAN33_20535-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2740888..2741655+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_20535-T1 ID=CAN33_20535-T1|Name=CAN33_20535-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=768bp|location=Sequence derived from alignment at NKJJ01000011.1:2740888..2741655+ (Aspergillus niger FDAARGOS_311)
ATGTCTGTGAGTAATACTCGCCCGTGTGTTCCCCTCTCAGGGCTAACCGT
TTATTTCCCTGCCTTGTAGCTCGCGTCTGGGTATGTTCCTGACTGCTTCT
GATCTCCGCATGTGTCTTCGACCATCCCTACAATATCGGGAACTCGACGA
TGACAACCGAATAAGGCTGACTAAGTTACGGAGGACAGTGTTTCCATCAC
CGATGAGTGCATCACCGCATTCAACGAGTTCCGCATGAGCGGCAACAGCA
GGGGAAGCAAGACGAAGTTCATCATCTTCAAGATCGCCGACAACAAGAAG
GAGGTTGTCATCGACGAGGTTTCCCAGGACGAGGACTACGAGGTCTTCCG
CGAAAAGCTCGCGGCCGCTAAGGATGCTAAGGGCAACCCCGCTCCCCGTT
ATGCAGTTTACGACGTCGAGTACGACCTGGGCGGTGGTGAAGGCAAGAGG
TATGATGATGATGACGATAGCCGAACGTTTACTTTAGCATATCTGCTCAC
TTTCTTCTCACCACAGGAGCAAGATCATCTTCATTTCCTGGGTTCCCAGC
GACACCGCTACCCTCGTACGTTCCGCACCGTCTCAGTTGTTCAAGCCCCC
AAATCATTGCTGACACCGATGAAACAGTGGTCCATGATCTACGCCAGCAC
TCGCGAGAACCTGAAGAACGCCCTCAACATCCACACCTCCATCCACGCCG
ACGACAAGTCCGACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGT
GGTAAGGCTGGCAAATAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:2740888..2741655+

>CAN33_20535-T1 ID=CAN33_20535-T1|Name=CAN33_20535-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2340bp|location=Sequence derived from alignment at NKJJ01000011.1:2740888..2741655+ (Aspergillus niger FDAARGOS_311)
ATGTCTCTCGCGTCTGGTGTTTCCATCACCGATGAGTGCATCACCGCATT
CAACGAGTTCCGCATGAGCGGCAACAGCAGGGGAAGCAAGACGAAGTTCA
TCATCTTCAAGATCGCCGACAACAAGAAGGAGGTTGTCATCGACGAGGTT
TCCCAGGACGAGGACTACGAGGTCTTCCGCGAAAAGCTCGCGGCCGCTAA
GGATGCTAAGGGCAACCCCGCTCCCCGTTATGCAGTTTACGACGTCGAGT
ACGACCTGGGCGGTGGTGAAGGCAAGAGGAGCAAGATCATCTTCATTTCC
TGGGTTCCCAGCGACACCGCTACCCTCTGGTCCATGATCTACGCCAGCAC
TCGCGAGAACCTGAAGAACGCCCTCAACATCCACACCTCCATCCACGCCG
ACGACAAGTCCGACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGT
GGTAAGGCTGGCAAATAAATGTCTCTCGCGTCTGGTGTTTCCATCACCGA
TGAGTGCATCACCGCATTCAACGAGTTCCGCATGAGCGGCAACAGCAGGG
GAAGCAAGACGAAGTTCATCATCTTCAAGATCGCCGACAACAAGAAGGAG
GTTGTCATCGACGAGGTTTCCCAGGACGAGGACTACGAGGTCTTCCGCGA
AAAGCTCGCGGCCGCTAAGGATGCTAAGGGCAACCCCGCTCCCCGTTATG
CAGTTTACGACGTCGAGTACGACCTGGGCGGTGGTGAAGGCAAGAGGAGC
AAGATCATCTTCATTTCCTGGGTTCCCAGCGACACCGCTACCCTCTGGTC
CATGATCTACGCCAGCACTCGCGAGAACCTGAAGAACGCCCTCAACATCC
ACACCTCCATCCACGCCGACGACAAGTCCGACATCGAGTGGAAGACCGTC
CTGGCCGAGGCCAGCGGTGGTAAGGCTGGCAAATAAATGTCTCTCGCGTC
TGGTGTTTCCATCACCGATGAGTGCATCACCGCATTCAACGAGTTCCGCA
TGAGCGGCAACAGCAGGGGAAGCAAGACGAAGTTCATCATCTTCAAGATC
GCCGACAACAAGAAGGAGGTTGTCATCGACGAGGTTTCCCAGGACGAGGA
CTACGAGGTCTTCCGCGAAAAGCTCGCGGCCGCTAAGGATGCTAAGGGCA
ACCCCGCTCCCCGTTATGCAGTTTACGACGTCGAGTACGACCTGGGCGGT
GGTGAAGGCAAGAGGAGCAAGATCATCTTCATTTCCTGGGTTCCCAGCGA
CACCGCTACCCTCTGGTCCATGATCTACGCCAGCACTCGCGAGAACCTGA
AGAACGCCCTCAACATCCACACCTCCATCCACGCCGACGACAAGTCCGAC
ATCGAGTGGAAGACCGTCCTGGCCGAGGCCAGCGGTGGTAAGGCTGGCAA
ATAAATGTCTCTCGCGTCTGGTGTTTCCATCACCGATGAGTGCATCACCG
CATTCAACGAGTTCCGCATGAGCGGCAACAGCAGGGGAAGCAAGACGAAG
TTCATCATCTTCAAGATCGCCGACAACAAGAAGGAGGTTGTCATCGACGA
GGTTTCCCAGGACGAGGACTACGAGGTCTTCCGCGAAAAGCTCGCGGCCG
CTAAGGATGCTAAGGGCAACCCCGCTCCCCGTTATGCAGTTTACGACGTC
GAGTACGACCTGGGCGGTGGTGAAGGCAAGAGGAGCAAGATCATCTTCAT
TTCCTGGGTTCCCAGCGACACCGCTACCCTCTGGTCCATGATCTACGCCA
GCACTCGCGAGAACCTGAAGAACGCCCTCAACATCCACACCTCCATCCAC
GCCGACGACAAGTCCGACATCGAGTGGAAGACCGTCCTGGCCGAGGCCAG
CGGTGGTAAGGCTGGCAAATAAATGTCTCTCGCGTCTGGTGTTTCCATCA
CCGATGAGTGCATCACCGCATTCAACGAGTTCCGCATGAGCGGCAACAGC
AGGGGAAGCAAGACGAAGTTCATCATCTTCAAGATCGCCGACAACAAGAA
GGAGGTTGTCATCGACGAGGTTTCCCAGGACGAGGACTACGAGGTCTTCC
GCGAAAAGCTCGCGGCCGCTAAGGATGCTAAGGGCAACCCCGCTCCCCGT
TATGCAGTTTACGACGTCGAGTACGACCTGGGCGGTGGTGAAGGCAAGAG
GAGCAAGATCATCTTCATTTCCTGGGTTCCCAGCGACACCGCTACCCTCT
GGTCCATGATCTACGCCAGCACTCGCGAGAACCTGAAGAACGCCCTCAAC
ATCCACACCTCCATCCACGCCGACGACAAGTCCGACATCGAGTGGAAGAC
CGTCCTGGCCGAGGCCAGCGGTGGTAAGGCTGGCAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0030042actin filament depolymerization
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_20535CAN33_20535Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20535-T1CAN33_20535-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20535-T1.exon1CAN33_20535-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_20535-T1.exon2CAN33_20535-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_20535-T1.exon3CAN33_20535-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_20535-T1.exon4CAN33_20535-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_20535-T1.exon5CAN33_20535-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20535-T1.cdsCAN33_20535-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR017904
DBxrefInterPro:IPR029006
DBxrefInterPro:IPR002108
DBxrefPFAM:PF00241
ProductCofilin/tropomyosin-type actin-binding protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2740888..2741655 +
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