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CAN33_20540-T1, CAN33_20540-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_20540-T1
Unique NameCAN33_20540-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2742602..2743378+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_20540-T1 ID=CAN33_20540-T1|Name=CAN33_20540-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=777bp|location=Sequence derived from alignment at NKJJ01000011.1:2742602..2743378+ (Aspergillus niger FDAARGOS_311)
ATGTTCCTTCGTTCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCC
CACCACGGGCCTGCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGCC
TGAACGCTCGTCCTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGACC
CGCGCCGCCTCCGAGCATGCCATCTCGAATCCCACACTCGCCGGTATTGA
GAAGCGCTGGGAGGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGC
AGCTGAGGGACCGCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGAG
AAGAAGGCCGGTATGCTGTTCTTTCTTGCCCCTTTCCGCTATCTTCCCCG
CGTCCAGCAGAATTTTGCTAACATGGGCCATTTTTTCTTCTTCCCCACGA
TTTAGCCTACTGGATCTCCTTCGGACCCCACGGCCCTCGTTCCGTGCCCC
CAAGGGCGAGAACCTCAAGATCTTCTTCAAGGTCGCCCAGCTCACCCTCG
TCAGCTTTGGTATTTTCTACGTCATCCACCTGTTCGCCAAGCCCCAGCCC
AAGACCATGACCAAGGAGTGGCAGGAGGCCTCCAATGAGTATGCTAAGGT
ATGTGAAATCAACAATCTGCATCAGTTGCTCGCCAATTGGCGTTGGCTGC
ACATTGGAACGGTCGCTGATGAGTATTATCACAACAGCAAGAGAAGATCA
ACCCTATCTACGGCATCAGCGCCGAGGGTTACGAGGGCAAGGGCTTCGTC
CAGAGCCCCCCTGCTGAGAAGCAATAG
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Coding sequence (CDS) from alignment at NKJJ01000011.1:2742602..2743378+

>CAN33_20540-T1 ID=CAN33_20540-T1|Name=CAN33_20540-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1800bp|location=Sequence derived from alignment at NKJJ01000011.1:2742602..2743378+ (Aspergillus niger FDAARGOS_311)
ATGTTCCTTCGTTCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCC
CACCACGGGCCTGCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGCC
TGAACGCTCGTCCTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGACC
CGCGCCGCCTCCGAGCATGCCATCTCGAATCCCACACTCGCCGGTATTGA
GAAGCGCTGGGAGGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGC
AGCTGAGGGACCGCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGAG
AAGAAGGCCGGTATGCTCCTACTGGATCTCCTTCGGACCCCACGGCCCTC
GTTCCGTGCCCCCAAGGGCGAGAACCTCAAGATCTTCTTCAAGGTCGCCC
AGCTCACCCTCGTCAGCTTTGGTATTTTCTACGTCATCCACCTGTTCGCC
AAGCCCCAGCCCAAGACCATGACCAAGGAGTGGCAGGAGGCCTCCAATGA
GTATGCTAAGCAAGAGAAGATCAACCCTATCTACGGCATCAGCGCCGAGG
GTTACGAGGGCAAGGGCTTCGTCCAGAGCCCCCCTGCTGAGAAGCAATAG
ATGTTCCTTCGTTCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCC
CACCACGGGCCTGCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGCC
TGAACGCTCGTCCTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGACC
CGCGCCGCCTCCGAGCATGCCATCTCGAATCCCACACTCGCCGGTATTGA
GAAGCGCTGGGAGGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGC
AGCTGAGGGACCGCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGAG
AAGAAGGCCGGTATGCTCCTACTGGATCTCCTTCGGACCCCACGGCCCTC
GTTCCGTGCCCCCAAGGGCGAGAACCTCAAGATCTTCTTCAAGGTCGCCC
AGCTCACCCTCGTCAGCTTTGGTATTTTCTACGTCATCCACCTGTTCGCC
AAGCCCCAGCCCAAGACCATGACCAAGGAGTGGCAGGAGGCCTCCAATGA
GTATGCTAAGCAAGAGAAGATCAACCCTATCTACGGCATCAGCGCCGAGG
GTTACGAGGGCAAGGGCTTCGTCCAGAGCCCCCCTGCTGAGAAGCAATAG
ATGTTCCTTCGTTCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCC
CACCACGGGCCTGCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGCC
TGAACGCTCGTCCTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGACC
CGCGCCGCCTCCGAGCATGCCATCTCGAATCCCACACTCGCCGGTATTGA
GAAGCGCTGGGAGGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGC
AGCTGAGGGACCGCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGAG
AAGAAGGCCGGTATGCTCCTACTGGATCTCCTTCGGACCCCACGGCCCTC
GTTCCGTGCCCCCAAGGGCGAGAACCTCAAGATCTTCTTCAAGGTCGCCC
AGCTCACCCTCGTCAGCTTTGGTATTTTCTACGTCATCCACCTGTTCGCC
AAGCCCCAGCCCAAGACCATGACCAAGGAGTGGCAGGAGGCCTCCAATGA
GTATGCTAAGCAAGAGAAGATCAACCCTATCTACGGCATCAGCGCCGAGG
GTTACGAGGGCAAGGGCTTCGTCCAGAGCCCCCCTGCTGAGAAGCAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
COX5CAN33_20540Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20540-T1.exon1CAN33_20540-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_20540-T1.exon2CAN33_20540-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_20540-T1.exon3CAN33_20540-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20540-T1.cdsCAN33_20540-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20540-T1CAN33_20540-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004203
DBxrefInterPro:IPR036639
DBxrefPFAM:PF02936
ProductCytochrome c oxidase subunit 5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2742602..2743378 +
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