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CAN33_20635-T1, CAN33_20635-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_20635-T1
Unique NameCAN33_20635-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2796572..2798831+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_20635-T1 ID=CAN33_20635-T1|Name=CAN33_20635-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2260bp|location=Sequence derived from alignment at NKJJ01000011.1:2796572..2798831+ (Aspergillus niger FDAARGOS_311)
ATGGCTGAAAAGGCGAACCCTCGTGCGTTCATCCAAGAAAATGTATGTGT
ACGCCTCTAACGTTGACAGCAGCAGTCCCTGCCTACGAGGAACAACCGGC
CGAAACCCACGAGCTTTCCTCCTCCAGAGAGGTGCCTGCATATACGCAAC
CTCCCGCGGGACAAACGCCCGAAATCCAACCGCATCAGCCCCAGCAGACC
TTTTATGCAGGCTCTCAACACCCGAGCGGCTATAATACTCCGACTCCGCT
GTATGCCCTGCAGAAAACACCAGCACCCGTGGATTGTCCGGCTTGCGGAG
AGCGGAAAATGACTCGCGTGGAGGCAGAAACGGGGAGTTCAACTCAGTAT
GTGCACGTGCTCCATAATGGTGAACCAAACTGACAATGTCCATAGTGCTT
GGGCTGCCGTGCTTTGCTGCTGCCTGTGTCTCGGATGTATTCCATACATG
ATGTCGTCGCTAAAGAATCAGTGTCATTACTGTGGGGTTGTGGTGCCTTG
TTGGCTACATGGCATAACAGTGGACGAACGGATGTGCATCGGTCTGGTGC
GAAGTGATGCGATTGTTTTGCTGTTGCCTATGTCTTTTCTCGTTCTTTAT
GTGATACCACTATGACTCTTTTACCATACCATGTTTGGACATACTTATTG
TGATGCCTGGGAAGCATTTGCCTGTCTATAGACTACGCGAAGGCACATAT
GTCTGGTGCCTGACCTATGGGTAAATGTACACTCTAACATGACTTATCAG
GACTCCAACCTTCCTTTCGCTTTCTTAGTATTATCAACTTCGTCGATTTT
GCAGCTATATGACCAAAGGGACAGTGACCAAGCAGTTACTACCTTCATAT
GTACTCGACTCCTATGCGGCAGAATGAAATCGACATTTAATACGCGGGAT
CCCCATGGCTGAAGGACAGGTACCCGATTGGGCAATCTCTGAGGCGGTCA
CAAGCTCTCTGTCTCTATCTTGAACTGCTGATCATATTCTGCGGGCCCGT
TGTTTAGCCATGATAGGCCGCATACGAGAACTGGACCCAAGTGGGACCAT
CTGGTTCAGCCCTAATGGCTGGACCCTGGATCTTTCTACAGTATGCATCT
TCTGGCATCCAAGGACAATGATTCCGGAAGGCTTCTTTGGCTCGCCCAAG
TTCAGCGAGTAGTAAATCCATGTCTCATTGCATTAGCAATGCTGGGAAGG
GGCCGATTAGATAAGAGCGCGGACCGGATGTATGACGTCAAGGATGTTCT
GCCGGCGAACACGAGAAGGGGTCTGTTCTCTAGAATTTCTATCAACAAAG
CCAGAGCTTTCGCCTATGGATGAATCCTCGATTCTCCTGTCCACGACTCA
TTTATTTCGCATCCACTGCAGCCGGGCACGAATCGGGAGGCCGGGTGGTG
GTAGAGAACCATGGCCGTGAAAGAGTGGTGACGCCAGCGGGACGAGCGGA
TCGCCAAACCTTGATCACGATTGATTTCATGACTGTTCCTTATGGTAAAC
CATCGCTATGCGCGTTCTATGGCATGCAGCTTGGGGATGAAGCATCAGGA
ATAGGCGTTGATAATTGCGAATGGCTTCGGTGTAACTGAAGGTGGGGAGA
ATGCACACCTCCCTGTCCGGAGTGCTGCCGCGCCAATTGACTGGCTCGAA
TGGCCTCACCTCGAGTTGTTGTGTGTTGATGACCCTTGATCGTCCCGAGT
TCGACTTACCAAGTTACCCTCCTGTCAGAAATAAGCTTCATGGGCCAACC
CATCCAGCGTTGCATGCATGTGCCCTCCTTCACGTCATTGCGCTCCTTGC
TGTCATGACCTTCCGCTGCTCCCGATGCCGCCAGTCCTACCAGTAACCAG
GGTTGTTCACCCGCCCGTCCAACTCTTCCTTTCTCTCTTTATTTCCCTCG
TGTCATATCATCTCTGCTTCCCGTGCCGTTGTTCTCGCAGGAGTCGTGGG
CATCCTCATACTGTCTTGATCAGTCCTCGTTCACTGAAGCCGCGCGGCCG
ATCTTCGTGAGTTGCACATGTTTTGAGGGGATTCTTTGTGGTAGGCTAAT
ATGAAGTAGATCATGGCCGCTATCGACCTCCTAGCCCTTGAAGCACGACA
CCAAGTGATCAAGCGAAGCAACTGGGCCGGCGAGAATCCCGGTGTGGTCC
TGGTCTTTTGCATCGTTTTCATCGTTGCTGTGGGAATCATCGCGCTCTTC
ATCTACCGAAAATGCATGGCACGGAAAGCAGCGAAACAGTCATATGAGGT
CGAAGCTTGA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:2796572..2798831+

>CAN33_20635-T1 ID=CAN33_20635-T1|Name=CAN33_20635-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2895bp|location=Sequence derived from alignment at NKJJ01000011.1:2796572..2798831+ (Aspergillus niger FDAARGOS_311)
ATGGCTGAAAAGGCGAACCCTCCAGCAGTCCCTGCCTACGAGGAACAACC
GGCCGAAACCCACGAGCTTTCCTCCTCCAGAGAGGTGCCTGCATATACGC
AACCTCCCGCGGGACAAACGCCCGAAATCCAACCGCATCAGCCCCAGCAG
ACCTTTTATGCAGGCTCTCAACACCCGAGCGGCTATAATACTCCGACTCC
GCTGTATGCCCTGCAGAAAACACCAGCACCCGTGGATTGTCCGGCTTGCG
GAGAGCGGAAAATGACTCGCGTGGAGGCAGAAACGGGGAGTTCAACTCAT
GCTTGGGCTGCCGAGTCGTGGGCATCCTCATACTGTCTTGATCAGTCCTC
GTTCACTGAAGCCGCGCGGCCGATCTTCATCATGGCCGCTATCGACCTCC
TAGCCCTTGAAGCACGACACCAAGTGATCAAGCGAAGCAACTGGGCCGGC
GAGAATCCCGGTGTGGTCCTGGTCTTTTGCATCGTTTTCATCGTTGCTGT
GGGAATCATCGCGCTCTTCATCTACCGAAAATGCATGGCACGGAAAGCAG
CGAAACAGTCATATGAGGTCGAAGCTTGAATGGCTGAAAAGGCGAACCCT
CCAGCAGTCCCTGCCTACGAGGAACAACCGGCCGAAACCCACGAGCTTTC
CTCCTCCAGAGAGGTGCCTGCATATACGCAACCTCCCGCGGGACAAACGC
CCGAAATCCAACCGCATCAGCCCCAGCAGACCTTTTATGCAGGCTCTCAA
CACCCGAGCGGCTATAATACTCCGACTCCGCTGTATGCCCTGCAGAAAAC
ACCAGCACCCGTGGATTGTCCGGCTTGCGGAGAGCGGAAAATGACTCGCG
TGGAGGCAGAAACGGGGAGTTCAACTCATGCTTGGGCTGCCGAGTCGTGG
GCATCCTCATACTGTCTTGATCAGTCCTCGTTCACTGAAGCCGCGCGGCC
GATCTTCATCATGGCCGCTATCGACCTCCTAGCCCTTGAAGCACGACACC
AAGTGATCAAGCGAAGCAACTGGGCCGGCGAGAATCCCGGTGTGGTCCTG
GTCTTTTGCATCGTTTTCATCGTTGCTGTGGGAATCATCGCGCTCTTCAT
CTACCGAAAATGCATGGCACGGAAAGCAGCGAAACAGTCATATGAGGTCG
AAGCTTGAATGGCTGAAAAGGCGAACCCTCCAGCAGTCCCTGCCTACGAG
GAACAACCGGCCGAAACCCACGAGCTTTCCTCCTCCAGAGAGGTGCCTGC
ATATACGCAACCTCCCGCGGGACAAACGCCCGAAATCCAACCGCATCAGC
CCCAGCAGACCTTTTATGCAGGCTCTCAACACCCGAGCGGCTATAATACT
CCGACTCCGCTGTATGCCCTGCAGAAAACACCAGCACCCGTGGATTGTCC
GGCTTGCGGAGAGCGGAAAATGACTCGCGTGGAGGCAGAAACGGGGAGTT
CAACTCATGCTTGGGCTGCCGAGTCGTGGGCATCCTCATACTGTCTTGAT
CAGTCCTCGTTCACTGAAGCCGCGCGGCCGATCTTCATCATGGCCGCTAT
CGACCTCCTAGCCCTTGAAGCACGACACCAAGTGATCAAGCGAAGCAACT
GGGCCGGCGAGAATCCCGGTGTGGTCCTGGTCTTTTGCATCGTTTTCATC
GTTGCTGTGGGAATCATCGCGCTCTTCATCTACCGAAAATGCATGGCACG
GAAAGCAGCGAAACAGTCATATGAGGTCGAAGCTTGAATGGCTGAAAAGG
CGAACCCTCCAGCAGTCCCTGCCTACGAGGAACAACCGGCCGAAACCCAC
GAGCTTTCCTCCTCCAGAGAGGTGCCTGCATATACGCAACCTCCCGCGGG
ACAAACGCCCGAAATCCAACCGCATCAGCCCCAGCAGACCTTTTATGCAG
GCTCTCAACACCCGAGCGGCTATAATACTCCGACTCCGCTGTATGCCCTG
CAGAAAACACCAGCACCCGTGGATTGTCCGGCTTGCGGAGAGCGGAAAAT
GACTCGCGTGGAGGCAGAAACGGGGAGTTCAACTCATGCTTGGGCTGCCG
AGTCGTGGGCATCCTCATACTGTCTTGATCAGTCCTCGTTCACTGAAGCC
GCGCGGCCGATCTTCATCATGGCCGCTATCGACCTCCTAGCCCTTGAAGC
ACGACACCAAGTGATCAAGCGAAGCAACTGGGCCGGCGAGAATCCCGGTG
TGGTCCTGGTCTTTTGCATCGTTTTCATCGTTGCTGTGGGAATCATCGCG
CTCTTCATCTACCGAAAATGCATGGCACGGAAAGCAGCGAAACAGTCATA
TGAGGTCGAAGCTTGAATGGCTGAAAAGGCGAACCCTCCAGCAGTCCCTG
CCTACGAGGAACAACCGGCCGAAACCCACGAGCTTTCCTCCTCCAGAGAG
GTGCCTGCATATACGCAACCTCCCGCGGGACAAACGCCCGAAATCCAACC
GCATCAGCCCCAGCAGACCTTTTATGCAGGCTCTCAACACCCGAGCGGCT
ATAATACTCCGACTCCGCTGTATGCCCTGCAGAAAACACCAGCACCCGTG
GATTGTCCGGCTTGCGGAGAGCGGAAAATGACTCGCGTGGAGGCAGAAAC
GGGGAGTTCAACTCATGCTTGGGCTGCCGAGTCGTGGGCATCCTCATACT
GTCTTGATCAGTCCTCGTTCACTGAAGCCGCGCGGCCGATCTTCATCATG
GCCGCTATCGACCTCCTAGCCCTTGAAGCACGACACCAAGTGATCAAGCG
AAGCAACTGGGCCGGCGAGAATCCCGGTGTGGTCCTGGTCTTTTGCATCG
TTTTCATCGTTGCTGTGGGAATCATCGCGCTCTTCATCTACCGAAAATGC
ATGGCACGGAAAGCAGCGAAACAGTCATATGAGGTCGAAGCTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_20635CAN33_20635Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20635-T1CAN33_20635-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20635-T1.exon1CAN33_20635-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_20635-T1.exon2CAN33_20635-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_20635-T1.exon3CAN33_20635-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_20635-T1.exon4CAN33_20635-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_20635-T1.exon5CAN33_20635-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20635-T1.cdsCAN33_20635-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR006629
ProductLITAF-like zinc ribbon domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2796572..2798831 +
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