|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:1259681..1261559+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_2065-T1 ID=CAN33_2065-T1|Name=CAN33_2065-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1879bp|location=Sequence derived from alignment at NKJJ01000004.1:1259681..1261559+ (Aspergillus niger FDAARGOS_311)
ATGGGTCGCAAAGGCACTGCTAGGACCGTTAAACGGGGCCGGAAGTCGAG
AAGGAACGATGATGAAGAGGATGGCGAACTGTATGTTTGACTTGCCACGC
ATGCTTGCGATGCCACTTGATGTGGCCGTCACTGCGACTCAAGGACTTGG
CTAACATGGCATTCTCTATAGGTCCGCTGCTGAATCGCTCGACTCTGCTA
GCATGTCCGAATCGGATTCAGGATCGGATTCCGAAGGCTCAGCCCCTGAA
GCTGAAGATGAAGGCCCTATCTTCCCTTACGAGAAACTATACTACTCTGC
TAAGGACAAGGAGGAAATCATGGCGATGCCCGAGATCCAACGAGAGCAGC
TGCTCTCCGAGCGTGCGCAGCAGGTTGATCGTCATAATCAAGATCTTGCT
CTTCGTCGTCTCCTGGCTTCCCGTGAACGCGAGGAGGCCCGCAAAGCGAA
GAAGAACAAACGCAAGGCCAGTGTGGCAAATCTTGATGAGGGCAATCGCA
AGAGCTCGCGTCAGAAGATGACGCTCGGTGGCCGTAAGATGGGAGAGACC
TCCGATGCTATTGAAGCCTACAAGCGGCAGCGAGAGCAGAAGGGGAAGCG
TGACGAGCTTCGTCGTCGTGAACCAGTCAAGGATCATAAAGCCCGTTCTC
GTGATGACCGGATCTCCGACGAAGATGCAGAGGGCGAAAGTGAAGTCGAG
TGGGATGACAGGGAACGCTCACCGTCGCCCCCGAAAGACGACCCGCCTGC
TGAACTCCGGGACATCCAACGTACTCGGGTGGGTCGAAGTAACTTTGCCC
AGGTCTGCTTTTACCCTGGGTTTGATGACGCGATCTCCGGCTGCTATGCT
CGTGTTAATATTGGGCCGAACCGTGAGACCGGTCAGAATGAGTATCGTCT
TTGCTTGATCAAGAGTAAGGCACCCCTCCTACGGTCGCGTTAGAGCATTC
GTCGCTGACTTGTTCAGAATTTTCCGAGGGAAAGCCCTATGCGATGGAGG
GCCAAAATGGCCGGTCTTTTGTGACGAATCAGTACGCCGTATTAGCACAT
GGAAAGGCTGAGCGCGAGTTTCCTTTTGTTGCATGCTCCGACTCTCCGTT
TACAGAGGTAAGCCACTTGGCATGTCTCTTGGTTAACATATACTGATGCT
CTGTAGGCGGAGTTCAACCGCTATCGTCAAACCATGGCCGTCGAAGACTG
CAAGATGGCTACGAAGTCAATGGTTGCCAGTAAGGTGACAGATATCAACC
GGTTGCTGAACCACAAGTTCACCAACGAGGAATTGAACGAGAAACTCCGC
AAACAAGGCTCGTTGGATTCGAAGTCCAAGTTCTTCAAGCGCGTGGAGGT
CGAGAAGCAGCTGAAGCTTGCTCGAGAAGCTGGTGATGATGCGGAAATGG
AGCGACTGGAGGCTGAGCTGGCTAGCATGGCGACACCGAAGCTCGCAGTT
AGCAGCCATTCCAAGCCGCGTGTGGACAAGCCCTCGGAACATGAACGTCT
TGCTGAGCTGAACATACGCAACCAGAAGCTCAACTACGAGAACGTGCGCC
GGGCGCAGATAGAAGAGCGTAAGGCCAGCCGTAAAGCGGCTGCAGCTGTC
GCTCGTGGCGAAGCCGCCCACAACCCGTTCATGCGCGTTAGAACCCAAGC
GCGGACCCATTACGACGTCAATGGTAACGGTACCCCGACGGCTGAGAATA
ACGCGAGCCAAGAAAATACTGCTTCAGAGACACCGTCCAAAGCGAGCACT
CCGGCCAGCGGCACCCCGGCGGGATCCCAGAAGAAAACCAGCAAAGGTGG
CGTTGCCTCCATCCGGCATCGGAACATGGATGACGAAAACATTGCGGCCT
TGGATTTGGAGCTCGACATTGAAATATGA back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:1259681..1261559+ >CAN33_2065-T1 ID=CAN33_2065-T1|Name=CAN33_2065-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6744bp|location=Sequence derived from alignment at NKJJ01000004.1:1259681..1261559+ (Aspergillus niger FDAARGOS_311)
ATGGGTCGCAAAGGCACTGCTAGGACCGTTAAACGGGGCCGGAAGTCGAG
AAGGAACGATGATGAAGAGGATGGCGAACTGTCCGCTGCTGAATCGCTCG
ACTCTGCTAGCATGTCCGAATCGGATTCAGGATCGGATTCCGAAGGCTCA
GCCCCTGAAGCTGAAGATGAAGGCCCTATCTTCCCTTACGAGAAACTATA
CTACTCTGCTAAGGACAAGGAGGAAATCATGGCGATGCCCGAGATCCAAC
GAGAGCAGCTGCTCTCCGAGCGTGCGCAGCAGGTTGATCGTCATAATCAA
GATCTTGCTCTTCGTCGTCTCCTGGCTTCCCGTGAACGCGAGGAGGCCCG
CAAAGCGAAGAAGAACAAACGCAAGGCCAGTGTGGCAAATCTTGATGAGG
GCAATCGCAAGAGCTCGCGTCAGAAGATGACGCTCGGTGGCCGTAAGATG
GGAGAGACCTCCGATGCTATTGAAGCCTACAAGCGGCAGCGAGAGCAGAA
GGGGAAGCGTGACGAGCTTCGTCGTCGTGAACCAGTCAAGGATCATAAAG
CCCGTTCTCGTGATGACCGGATCTCCGACGAAGATGCAGAGGGCGAAAGT
GAAGTCGAGTGGGATGACAGGGAACGCTCACCGTCGCCCCCGAAAGACGA
CCCGCCTGCTGAACTCCGGGACATCCAACGTACTCGGGTGGGTCGAAGTA
ACTTTGCCCAGGTCTGCTTTTACCCTGGGTTTGATGACGCGATCTCCGGC
TGCTATGCTCGTGTTAATATTGGGCCGAACCGTGAGACCGGTCAGAATGA
GTATCGTCTTTGCTTGATCAAGAAATTTTCCGAGGGAAAGCCCTATGCGA
TGGAGGGCCAAAATGGCCGGTCTTTTGTGACGAATCAGTACGCCGTATTA
GCACATGGAAAGGCTGAGCGCGAGTTTCCTTTTGTTGCATGCTCCGACTC
TCCGTTTACAGAGGCGGAGTTCAACCGCTATCGTCAAACCATGGCCGTCG
AAGACTGCAAGATGGCTACGAAGTCAATGGTTGCCAGTAAGGTGACAGAT
ATCAACCGGTTGCTGAACCACAAGTTCACCAACGAGGAATTGAACGAGAA
ACTCCGCAAACAAGGCTCGTTGGATTCGAAGTCCAAGTTCTTCAAGCGCG
TGGAGGTCGAGAAGCAGCTGAAGCTTGCTCGAGAAGCTGGTGATGATGCG
GAAATGGAGCGACTGGAGGCTGAGCTGGCTAGCATGGCGACACCGAAGCT
CGCAGTTAGCAGCCATTCCAAGCCGCGTGTGGACAAGCCCTCGGAACATG
AACGTCTTGCTGAGCTGAACATACGCAACCAGAAGCTCAACTACGAGAAC
GTGCGCCGGGCGCAGATAGAAGAGCGTAAGGCCAGCCGTAAAGCGGCTGC
AGCTGTCGCTCGTGGCGAAGCCGCCCACAACCCGTTCATGCGCGTTAGAA
CCCAAGCGCGGACCCATTACGACGTCAATGGTAACGGTACCCCGACGGCT
GAGAATAACGCGAGCCAAGAAAATACTGCTTCAGAGACACCGTCCAAAGC
GAGCACTCCGGCCAGCGGCACCCCGGCGGGATCCCAGAAGAAAACCAGCA
AAGGTGGCGTTGCCTCCATCCGGCATCGGAACATGGATGACGAAAACATT
GCGGCCTTGGATTTGGAGCTCGACATTGAAATATGAATGGGTCGCAAAGG
CACTGCTAGGACCGTTAAACGGGGCCGGAAGTCGAGAAGGAACGATGATG
AAGAGGATGGCGAACTGTCCGCTGCTGAATCGCTCGACTCTGCTAGCATG
TCCGAATCGGATTCAGGATCGGATTCCGAAGGCTCAGCCCCTGAAGCTGA
AGATGAAGGCCCTATCTTCCCTTACGAGAAACTATACTACTCTGCTAAGG
ACAAGGAGGAAATCATGGCGATGCCCGAGATCCAACGAGAGCAGCTGCTC
TCCGAGCGTGCGCAGCAGGTTGATCGTCATAATCAAGATCTTGCTCTTCG
TCGTCTCCTGGCTTCCCGTGAACGCGAGGAGGCCCGCAAAGCGAAGAAGA
ACAAACGCAAGGCCAGTGTGGCAAATCTTGATGAGGGCAATCGCAAGAGC
TCGCGTCAGAAGATGACGCTCGGTGGCCGTAAGATGGGAGAGACCTCCGA
TGCTATTGAAGCCTACAAGCGGCAGCGAGAGCAGAAGGGGAAGCGTGACG
AGCTTCGTCGTCGTGAACCAGTCAAGGATCATAAAGCCCGTTCTCGTGAT
GACCGGATCTCCGACGAAGATGCAGAGGGCGAAAGTGAAGTCGAGTGGGA
TGACAGGGAACGCTCACCGTCGCCCCCGAAAGACGACCCGCCTGCTGAAC
TCCGGGACATCCAACGTACTCGGGTGGGTCGAAGTAACTTTGCCCAGGTC
TGCTTTTACCCTGGGTTTGATGACGCGATCTCCGGCTGCTATGCTCGTGT
TAATATTGGGCCGAACCGTGAGACCGGTCAGAATGAGTATCGTCTTTGCT
TGATCAAGAAATTTTCCGAGGGAAAGCCCTATGCGATGGAGGGCCAAAAT
GGCCGGTCTTTTGTGACGAATCAGTACGCCGTATTAGCACATGGAAAGGC
TGAGCGCGAGTTTCCTTTTGTTGCATGCTCCGACTCTCCGTTTACAGAGG
CGGAGTTCAACCGCTATCGTCAAACCATGGCCGTCGAAGACTGCAAGATG
GCTACGAAGTCAATGGTTGCCAGTAAGGTGACAGATATCAACCGGTTGCT
GAACCACAAGTTCACCAACGAGGAATTGAACGAGAAACTCCGCAAACAAG
GCTCGTTGGATTCGAAGTCCAAGTTCTTCAAGCGCGTGGAGGTCGAGAAG
CAGCTGAAGCTTGCTCGAGAAGCTGGTGATGATGCGGAAATGGAGCGACT
GGAGGCTGAGCTGGCTAGCATGGCGACACCGAAGCTCGCAGTTAGCAGCC
ATTCCAAGCCGCGTGTGGACAAGCCCTCGGAACATGAACGTCTTGCTGAG
CTGAACATACGCAACCAGAAGCTCAACTACGAGAACGTGCGCCGGGCGCA
GATAGAAGAGCGTAAGGCCAGCCGTAAAGCGGCTGCAGCTGTCGCTCGTG
GCGAAGCCGCCCACAACCCGTTCATGCGCGTTAGAACCCAAGCGCGGACC
CATTACGACGTCAATGGTAACGGTACCCCGACGGCTGAGAATAACGCGAG
CCAAGAAAATACTGCTTCAGAGACACCGTCCAAAGCGAGCACTCCGGCCA
GCGGCACCCCGGCGGGATCCCAGAAGAAAACCAGCAAAGGTGGCGTTGCC
TCCATCCGGCATCGGAACATGGATGACGAAAACATTGCGGCCTTGGATTT
GGAGCTCGACATTGAAATATGAATGGGTCGCAAAGGCACTGCTAGGACCG
TTAAACGGGGCCGGAAGTCGAGAAGGAACGATGATGAAGAGGATGGCGAA
CTGTCCGCTGCTGAATCGCTCGACTCTGCTAGCATGTCCGAATCGGATTC
AGGATCGGATTCCGAAGGCTCAGCCCCTGAAGCTGAAGATGAAGGCCCTA
TCTTCCCTTACGAGAAACTATACTACTCTGCTAAGGACAAGGAGGAAATC
ATGGCGATGCCCGAGATCCAACGAGAGCAGCTGCTCTCCGAGCGTGCGCA
GCAGGTTGATCGTCATAATCAAGATCTTGCTCTTCGTCGTCTCCTGGCTT
CCCGTGAACGCGAGGAGGCCCGCAAAGCGAAGAAGAACAAACGCAAGGCC
AGTGTGGCAAATCTTGATGAGGGCAATCGCAAGAGCTCGCGTCAGAAGAT
GACGCTCGGTGGCCGTAAGATGGGAGAGACCTCCGATGCTATTGAAGCCT
ACAAGCGGCAGCGAGAGCAGAAGGGGAAGCGTGACGAGCTTCGTCGTCGT
GAACCAGTCAAGGATCATAAAGCCCGTTCTCGTGATGACCGGATCTCCGA
CGAAGATGCAGAGGGCGAAAGTGAAGTCGAGTGGGATGACAGGGAACGCT
CACCGTCGCCCCCGAAAGACGACCCGCCTGCTGAACTCCGGGACATCCAA
CGTACTCGGGTGGGTCGAAGTAACTTTGCCCAGGTCTGCTTTTACCCTGG
GTTTGATGACGCGATCTCCGGCTGCTATGCTCGTGTTAATATTGGGCCGA
ACCGTGAGACCGGTCAGAATGAGTATCGTCTTTGCTTGATCAAGAAATTT
TCCGAGGGAAAGCCCTATGCGATGGAGGGCCAAAATGGCCGGTCTTTTGT
GACGAATCAGTACGCCGTATTAGCACATGGAAAGGCTGAGCGCGAGTTTC
CTTTTGTTGCATGCTCCGACTCTCCGTTTACAGAGGCGGAGTTCAACCGC
TATCGTCAAACCATGGCCGTCGAAGACTGCAAGATGGCTACGAAGTCAAT
GGTTGCCAGTAAGGTGACAGATATCAACCGGTTGCTGAACCACAAGTTCA
CCAACGAGGAATTGAACGAGAAACTCCGCAAACAAGGCTCGTTGGATTCG
AAGTCCAAGTTCTTCAAGCGCGTGGAGGTCGAGAAGCAGCTGAAGCTTGC
TCGAGAAGCTGGTGATGATGCGGAAATGGAGCGACTGGAGGCTGAGCTGG
CTAGCATGGCGACACCGAAGCTCGCAGTTAGCAGCCATTCCAAGCCGCGT
GTGGACAAGCCCTCGGAACATGAACGTCTTGCTGAGCTGAACATACGCAA
CCAGAAGCTCAACTACGAGAACGTGCGCCGGGCGCAGATAGAAGAGCGTA
AGGCCAGCCGTAAAGCGGCTGCAGCTGTCGCTCGTGGCGAAGCCGCCCAC
AACCCGTTCATGCGCGTTAGAACCCAAGCGCGGACCCATTACGACGTCAA
TGGTAACGGTACCCCGACGGCTGAGAATAACGCGAGCCAAGAAAATACTG
CTTCAGAGACACCGTCCAAAGCGAGCACTCCGGCCAGCGGCACCCCGGCG
GGATCCCAGAAGAAAACCAGCAAAGGTGGCGTTGCCTCCATCCGGCATCG
GAACATGGATGACGAAAACATTGCGGCCTTGGATTTGGAGCTCGACATTG
AAATATGAATGGGTCGCAAAGGCACTGCTAGGACCGTTAAACGGGGCCGG
AAGTCGAGAAGGAACGATGATGAAGAGGATGGCGAACTGTCCGCTGCTGA
ATCGCTCGACTCTGCTAGCATGTCCGAATCGGATTCAGGATCGGATTCCG
AAGGCTCAGCCCCTGAAGCTGAAGATGAAGGCCCTATCTTCCCTTACGAG
AAACTATACTACTCTGCTAAGGACAAGGAGGAAATCATGGCGATGCCCGA
GATCCAACGAGAGCAGCTGCTCTCCGAGCGTGCGCAGCAGGTTGATCGTC
ATAATCAAGATCTTGCTCTTCGTCGTCTCCTGGCTTCCCGTGAACGCGAG
GAGGCCCGCAAAGCGAAGAAGAACAAACGCAAGGCCAGTGTGGCAAATCT
TGATGAGGGCAATCGCAAGAGCTCGCGTCAGAAGATGACGCTCGGTGGCC
GTAAGATGGGAGAGACCTCCGATGCTATTGAAGCCTACAAGCGGCAGCGA
GAGCAGAAGGGGAAGCGTGACGAGCTTCGTCGTCGTGAACCAGTCAAGGA
TCATAAAGCCCGTTCTCGTGATGACCGGATCTCCGACGAAGATGCAGAGG
GCGAAAGTGAAGTCGAGTGGGATGACAGGGAACGCTCACCGTCGCCCCCG
AAAGACGACCCGCCTGCTGAACTCCGGGACATCCAACGTACTCGGGTGGG
TCGAAGTAACTTTGCCCAGGTCTGCTTTTACCCTGGGTTTGATGACGCGA
TCTCCGGCTGCTATGCTCGTGTTAATATTGGGCCGAACCGTGAGACCGGT
CAGAATGAGTATCGTCTTTGCTTGATCAAGAAATTTTCCGAGGGAAAGCC
CTATGCGATGGAGGGCCAAAATGGCCGGTCTTTTGTGACGAATCAGTACG
CCGTATTAGCACATGGAAAGGCTGAGCGCGAGTTTCCTTTTGTTGCATGC
TCCGACTCTCCGTTTACAGAGGCGGAGTTCAACCGCTATCGTCAAACCAT
GGCCGTCGAAGACTGCAAGATGGCTACGAAGTCAATGGTTGCCAGTAAGG
TGACAGATATCAACCGGTTGCTGAACCACAAGTTCACCAACGAGGAATTG
AACGAGAAACTCCGCAAACAAGGCTCGTTGGATTCGAAGTCCAAGTTCTT
CAAGCGCGTGGAGGTCGAGAAGCAGCTGAAGCTTGCTCGAGAAGCTGGTG
ATGATGCGGAAATGGAGCGACTGGAGGCTGAGCTGGCTAGCATGGCGACA
CCGAAGCTCGCAGTTAGCAGCCATTCCAAGCCGCGTGTGGACAAGCCCTC
GGAACATGAACGTCTTGCTGAGCTGAACATACGCAACCAGAAGCTCAACT
ACGAGAACGTGCGCCGGGCGCAGATAGAAGAGCGTAAGGCCAGCCGTAAA
GCGGCTGCAGCTGTCGCTCGTGGCGAAGCCGCCCACAACCCGTTCATGCG
CGTTAGAACCCAAGCGCGGACCCATTACGACGTCAATGGTAACGGTACCC
CGACGGCTGAGAATAACGCGAGCCAAGAAAATACTGCTTCAGAGACACCG
TCCAAAGCGAGCACTCCGGCCAGCGGCACCCCGGCGGGATCCCAGAAGAA
AACCAGCAAAGGTGGCGTTGCCTCCATCCGGCATCGGAACATGGATGACG
AAAACATTGCGGCCTTGGATTTGGAGCTCGACATTGAAATATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264XOZ |
| DBxref | InterPro:IPR036128 |
| DBxref | InterPro:IPR004343 |
| DBxref | PFAM:PF03126 |
| Product | Plus-3 domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:1259681..1261559 + |
|
