|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:2811888..2813877- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_20660-T1 ID=CAN33_20660-T1|Name=CAN33_20660-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1990bp|location=Sequence derived from alignment at NKJJ01000011.1:2811888..2813877- (Aspergillus niger FDAARGOS_311)
ATGACGCCATCCCGTGATAAGCCCGATTCAGCTATCGACAAGAGGGATTT
TGATGCTCATCGCCCGTTACTCGATGATGCAGATGCTGAGGCGGATGAGC
AACAACGAGGACACCTACGGTCACGGCCACAGTCGTGTTTATCGGCCACC
AACAATGACGATGGTCTCCTGAATGATGTTGTCGACGAGATCCTAGAAAG
GGATAGAAAGAAGATGGCCAAGGAAGTGGTGCGAGTTAGCAGTTTTGCGT
GGGGAGTTATTAGCTGGTAAGATCTCTTGTGCGTAAATAGGATGCGCTAA
TCACCCCCTCGTTGGATGGGTGGCTAATTGGCATTGTGATCATTAGTCTT
GGAGCTGGTAGCATTACCGCATTCTCGCTCTACGGACCCCTGTTGCTCAC
TCGTCTCCACTACACTCAACTCCGGGTCAATGCTGTCGCAATCGCCGCGG
AGGTCTCGATGTACTTACCTGTCCCGCTGTTTGGATATCTGTGTGATCGG
TACAGCCCATCTCCGCTGGCCTTATTCTCTGGTTTCGTGTTTGGGGCTGG
GTACCTTCTGGCTGCACTGGCCTTCAAGAGTGGACCACCTCCTGATGCAG
GTGGCGACGGCTGGCCATTTTGGGTGATGATTGTGGCATTCATCGCCATT
GGCGTTGCTACCAGTTGCATGTACTTGGCTGCGGTCGCAACATGTGCCAA
AAATTTCGGCAGGGGTAAGCATAAGGGAATCATGCTTGCTGTTCCTATCG
CGGGTTTTGGCCTTAGTGGCATGTGGCAAAGCCAAGTAGGAACGTACTTC
CTATGTGACCGTCTTGAGGATGGTACGCGTGGGGATGTCAATGTATATAA
GTACTTCTTGTTTCTCGCCATCCTGTTGTTCTGCGTTGGTGTAATTGGCA
CCTTTGCCCTCAGGATCGTGGATGAGAACGAAGACAAGTACATTGACGAG
GCGGTAGAGGAGTTGGAGCGCAGTGGCCTCCTTGAGGAGAGCGAGTTCTT
CCGGCCCAGGAACGACGACAGAACCGCATATGGAACGTTTTCGCAGGCCG
AGGACGGCACCGGATCCGATGGAGACCAAACTCTGACACTGTCAGAAGAG
GAGCGAGAAGCAGCAAGACTTGAGAAGGAAAGGGAAGAAGAAGAACGCCG
GAAGAAGAACTGGCTGCTGAACTACGAGACGAGGATCTTCCTCCAGGACA
AGTCAATGTGGTGGCTTGCCATTGGCTTCTTCCTGGTCACTGGGCCAGGA
GAGGCATATATCAATAACGTATGTTGCGTCCATATACTGACTATGCCATC
AAAGCATCTCACTCTGACTGACACGCTCTCTAGCTGGGCACTATTGTCCA
ATCCTTGACTCCTGTATCAAATATTACAAATGCCTCGTCACCTGCAGGCT
TACCATCAACCCATGTCAGCACCATCGCGCTGACCTCGACCATTGCCCGA
CTTCTCACCGGCTCGCTCTCCGACCTCTTCGCCCCTCCAGCAACTCATCT
CTTCCCTGGTCCGAGTAGCCGCCCTGCCTCCATCACATCGGATACCAATC
GCACCACCTTCACCCGCCTTGCATTTCTCCTCCCCTCCGCCTTCCTCCTC
TCCATCGGCTATCTCCTTCTCTCCTCCCCGATTCTTCTCTACCACCCCGG
ATTCACCCACCTTACCACAGCCCTGATTGGTCTCGGCTACGGCAGTGCCT
TTTCTCTCGTCCCGATTATCATCTCTGTCGTCTGGGGAGTCGAGAACTTT
GCCACCAACTGGGGTATCGTTGCCATGGTTCCAGCCGCCGGAGCCGTTGT
CTGGGGTTTGGTCTATTCGCAAGGGTACCAGGATGCCATGGACGACGGAA
ATGGCACGAATGACGGCCAATGTCATGGCTGGAGGTGCTTTGGATTCTGG
GCCGTGGGATGTACGGTAAGCGTTTGGATCGCCATTGGGGCTTGGTTGAT
TGCGTGGAGGTATTGGAGACGACGAGGAGTTGTTGTTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:2811888..2813877- >CAN33_20660-T1 ID=CAN33_20660-T1|Name=CAN33_20660-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7950bp|location=Sequence derived from alignment at NKJJ01000011.1:2811888..2813877- (Aspergillus niger FDAARGOS_311)
CCCTGATTGGTCTCGGCTACGGCAGTGCCTTTTCTCTCGTCCCGATTATC
ATCTCTGTCGTCTGGGGAGTCGAGAACTTTGCCACCAACTGGGGTATCGT
TGCCATGGTTCCAGCCGCCGGAGCCGTTGTCTGGGGTTTGGTCTATTCGC
AAGGGTACCAGGATGCCATGGACGACGGAAATGGCACGAATGACGGCCAA
TGTCATGGCTGGAGGTGCTTTGGATTCTGGGCCGTGGGATGTACGGTAAG
CGTTTGGATCGCCATTGGGGCTTGGTTGATTGCGTGGAGGTATTGGAGAC
GACGAGGAGTTGTTGTTTAACTGGGCACTATTGTCCAATCCTTGACTCCT
GTATCAAATATTACAAATGCCTCGTCACCTGCAGGCTTACCATCAACCCA
TGTCAGCACCATCGCGCTGACCTCGACCATTGCCCGACTTCTCACCGGCT
CGCTCTCCGACCTCTTCGCCCCTCCAGCAACTCATCTCTTCCCTGGATCT
TCCTCCAGGACAAGTCAATGTGGTGGCTTGCCATTGGCTTCTTCCTGGTC
ACTGGGCCAGGAGAGGCATATATCAATAACTCTTGGAGCTGGTAGCATTA
CCGCATTCTCGCTCTACGGACCCCTGTTGCTCACTCGTCTCCACTACACT
CAACTCCGGGTCAATGCTGTCGCAATCGCCGCGGAGGTCTCGATGTACTT
ACCTGTCCCGCTGTTTGGATATCTGTGTGATCGGTACAGCCCATCTCCGC
TGGCCTTATTCTCTGGTTTCGTGTTTGGGGCTGGGTACCTTCTGGCTGCA
CTGGCCTTCAAGAGTGGACCACCTCCTGATGCAGGTGGCGACGGCTGGCC
ATTTTGGGTGATGATTGTGGCATTCATCGCCATTGGCGTTGCTACCAGTT
GCATGTACTTGGCTGCGGTCGCAACATGTGCCAAAAATTTCGGCAGGGGT
AAGCATAAGGGAATCATGCTTGCTGTTCCTATCGCGGGTTTTGGCCTTAG
TGGCATGTGGCAAAGCCAAGTAGGAACGTACTTCCTATGTGACCGTCTTG
AGGATGGTACGCGTGGGGATGTCAATGTATATAAGTACTTCTTGTTTCTC
GCCATCCTGTTGTTCTGCGTTGGTGTAATTGGCACCTTTGCCCTCAGGAT
CGTGGATGAGAACGAAGACAAGTACATTGACGAGGCGGTAGAGGAGTTGG
AGCGCAGTGGCCTCCTTGAGGAGAGCGAGTTCTTCCGGCCCAGGAACGAC
GACAGAACCGCATATGGAACGTTTTCGCAGGCCGAGGACGGCACCGGATC
CGATGGAGACCAAACTCTGACACTATGACGCCATCCCGTGATAAGCCCGA
TTCAGCTATCGACAAGAGGGATTTTGATGCTCATCGCCCGTTACTCGATG
ATGCAGATGCTGAGGCGGATGAGCAACAACGAGGACACCTACGGTCACGG
CCACAGTCGTGTTTATCGGCCACCAACAATGACGATGGTCTCCTGAATGA
TGTTGTCGACGAGATCCTAGAAAGGGATAGAAAGAAGATGGCCAAGGAAG
TGGTGCGAGTTAGCAGTTTTGCGTGGGGAGTTATTAGCTGCCCTGATTGG
TCTCGGCTACGGCAGTGCCTTTTCTCTCGTCCCGATTATCATCTCTGTCG
TCTGGGGAGTCGAGAACTTTGCCACCAACTGGGGTATCGTTGCCATGGTT
CCAGCCGCCGGAGCCGTTGTCTGGGGTTTGGTCTATTCGCAAGGGTACCA
GGATGCCATGGACGACGGAAATGGCACGAATGACGGCCAATGTCATGGCT
GGAGGTGCTTTGGATTCTGGGCCGTGGGATGTACGGTAAGCGTTTGGATC
GCCATTGGGGCTTGGTTGATTGCGTGGAGGTATTGGAGACGACGAGGAGT
TGTTGTTTAACTGGGCACTATTGTCCAATCCTTGACTCCTGTATCAAATA
TTACAAATGCCTCGTCACCTGCAGGCTTACCATCAACCCATGTCAGCACC
ATCGCGCTGACCTCGACCATTGCCCGACTTCTCACCGGCTCGCTCTCCGA
CCTCTTCGCCCCTCCAGCAACTCATCTCTTCCCTGGATCTTCCTCCAGGA
CAAGTCAATGTGGTGGCTTGCCATTGGCTTCTTCCTGGTCACTGGGCCAG
GAGAGGCATATATCAATAACTCTTGGAGCTGGTAGCATTACCGCATTCTC
GCTCTACGGACCCCTGTTGCTCACTCGTCTCCACTACACTCAACTCCGGG
TCAATGCTGTCGCAATCGCCGCGGAGGTCTCGATGTACTTACCTGTCCCG
CTGTTTGGATATCTGTGTGATCGGTACAGCCCATCTCCGCTGGCCTTATT
CTCTGGTTTCGTGTTTGGGGCTGGGTACCTTCTGGCTGCACTGGCCTTCA
AGAGTGGACCACCTCCTGATGCAGGTGGCGACGGCTGGCCATTTTGGGTG
ATGATTGTGGCATTCATCGCCATTGGCGTTGCTACCAGTTGCATGTACTT
GGCTGCGGTCGCAACATGTGCCAAAAATTTCGGCAGGGGTAAGCATAAGG
GAATCATGCTTGCTGTTCCTATCGCGGGTTTTGGCCTTAGTGGCATGTGG
CAAAGCCAAGTAGGAACGTACTTCCTATGTGACCGTCTTGAGGATGGTAC
GCGTGGGGATGTCAATGTATATAAGTACTTCTTGTTTCTCGCCATCCTGT
TGTTCTGCGTTGGTGTAATTGGCACCTTTGCCCTCAGGATCGTGGATGAG
AACGAAGACAAGTACATTGACGAGGCGGTAGAGGAGTTGGAGCGCAGTGG
CCTCCTTGAGGAGAGCGAGTTCTTCCGGCCCAGGAACGACGACAGAACCG
CATATGGAACGTTTTCGCAGGCCGAGGACGGCACCGGATCCGATGGAGAC
CAAACTCTGACACTATGACGCCATCCCGTGATAAGCCCGATTCAGCTATC
GACAAGAGGGATTTTGATGCTCATCGCCCGTTACTCGATGATGCAGATGC
TGAGGCGGATGAGCAACAACGAGGACACCTACGGTCACGGCCACAGTCGT
GTTTATCGGCCACCAACAATGACGATGGTCTCCTGAATGATGTTGTCGAC
GAGATCCTAGAAAGGGATAGAAAGAAGATGGCCAAGGAAGTGGTGCGAGT
TAGCAGTTTTGCGTGGGGAGTTATTAGCTGCCCTGATTGGTCTCGGCTAC
GGCAGTGCCTTTTCTCTCGTCCCGATTATCATCTCTGTCGTCTGGGGAGT
CGAGAACTTTGCCACCAACTGGGGTATCGTTGCCATGGTTCCAGCCGCCG
GAGCCGTTGTCTGGGGTTTGGTCTATTCGCAAGGGTACCAGGATGCCATG
GACGACGGAAATGGCACGAATGACGGCCAATGTCATGGCTGGAGGTGCTT
TGGATTCTGGGCCGTGGGATGTACGGTAAGCGTTTGGATCGCCATTGGGG
CTTGGTTGATTGCGTGGAGGTATTGGAGACGACGAGGAGTTGTTGTTTAA
CTGGGCACTATTGTCCAATCCTTGACTCCTGTATCAAATATTACAAATGC
CTCGTCACCTGCAGGCTTACCATCAACCCATGTCAGCACCATCGCGCTGA
CCTCGACCATTGCCCGACTTCTCACCGGCTCGCTCTCCGACCTCTTCGCC
CCTCCAGCAACTCATCTCTTCCCTGGATCTTCCTCCAGGACAAGTCAATG
TGGTGGCTTGCCATTGGCTTCTTCCTGGTCACTGGGCCAGGAGAGGCATA
TATCAATAACTCTTGGAGCTGGTAGCATTACCGCATTCTCGCTCTACGGA
CCCCTGTTGCTCACTCGTCTCCACTACACTCAACTCCGGGTCAATGCTGT
CGCAATCGCCGCGGAGGTCTCGATGTACTTACCTGTCCCGCTGTTTGGAT
ATCTGTGTGATCGGTACAGCCCATCTCCGCTGGCCTTATTCTCTGGTTTC
GTGTTTGGGGCTGGGTACCTTCTGGCTGCACTGGCCTTCAAGAGTGGACC
ACCTCCTGATGCAGGTGGCGACGGCTGGCCATTTTGGGTGATGATTGTGG
CATTCATCGCCATTGGCGTTGCTACCAGTTGCATGTACTTGGCTGCGGTC
GCAACATGTGCCAAAAATTTCGGCAGGGGTAAGCATAAGGGAATCATGCT
TGCTGTTCCTATCGCGGGTTTTGGCCTTAGTGGCATGTGGCAAAGCCAAG
TAGGAACGTACTTCCTATGTGACCGTCTTGAGGATGGTACGCGTGGGGAT
GTCAATGTATATAAGTACTTCTTGTTTCTCGCCATCCTGTTGTTCTGCGT
TGGTGTAATTGGCACCTTTGCCCTCAGGATCGTGGATGAGAACGAAGACA
AGTACATTGACGAGGCGGTAGAGGAGTTGGAGCGCAGTGGCCTCCTTGAG
GAGAGCGAGTTCTTCCGGCCCAGGAACGACGACAGAACCGCATATGGAAC
GTTTTCGCAGGCCGAGGACGGCACCGGATCCGATGGAGACCAAACTCTGA
CACTATGACGCCATCCCGTGATAAGCCCGATTCAGCTATCGACAAGAGGG
ATTTTGATGCTCATCGCCCGTTACTCGATGATGCAGATGCTGAGGCGGAT
GAGCAACAACGAGGACACCTACGGTCACGGCCACAGTCGTGTTTATCGGC
CACCAACAATGACGATGGTCTCCTGAATGATGTTGTCGACGAGATCCTAG
AAAGGGATAGAAAGAAGATGGCCAAGGAAGTGGTGCGAGTTAGCAGTTTT
GCGTGGGGAGTTATTAGCTGCCCTGATTGGTCTCGGCTACGGCAGTGCCT
TTTCTCTCGTCCCGATTATCATCTCTGTCGTCTGGGGAGTCGAGAACTTT
GCCACCAACTGGGGTATCGTTGCCATGGTTCCAGCCGCCGGAGCCGTTGT
CTGGGGTTTGGTCTATTCGCAAGGGTACCAGGATGCCATGGACGACGGAA
ATGGCACGAATGACGGCCAATGTCATGGCTGGAGGTGCTTTGGATTCTGG
GCCGTGGGATGTACGGTAAGCGTTTGGATCGCCATTGGGGCTTGGTTGAT
TGCGTGGAGGTATTGGAGACGACGAGGAGTTGTTGTTTAACTGGGCACTA
TTGTCCAATCCTTGACTCCTGTATCAAATATTACAAATGCCTCGTCACCT
GCAGGCTTACCATCAACCCATGTCAGCACCATCGCGCTGACCTCGACCAT
TGCCCGACTTCTCACCGGCTCGCTCTCCGACCTCTTCGCCCCTCCAGCAA
CTCATCTCTTCCCTGGATCTTCCTCCAGGACAAGTCAATGTGGTGGCTTG
CCATTGGCTTCTTCCTGGTCACTGGGCCAGGAGAGGCATATATCAATAAC
TCTTGGAGCTGGTAGCATTACCGCATTCTCGCTCTACGGACCCCTGTTGC
TCACTCGTCTCCACTACACTCAACTCCGGGTCAATGCTGTCGCAATCGCC
GCGGAGGTCTCGATGTACTTACCTGTCCCGCTGTTTGGATATCTGTGTGA
TCGGTACAGCCCATCTCCGCTGGCCTTATTCTCTGGTTTCGTGTTTGGGG
CTGGGTACCTTCTGGCTGCACTGGCCTTCAAGAGTGGACCACCTCCTGAT
GCAGGTGGCGACGGCTGGCCATTTTGGGTGATGATTGTGGCATTCATCGC
CATTGGCGTTGCTACCAGTTGCATGTACTTGGCTGCGGTCGCAACATGTG
CCAAAAATTTCGGCAGGGGTAAGCATAAGGGAATCATGCTTGCTGTTCCT
ATCGCGGGTTTTGGCCTTAGTGGCATGTGGCAAAGCCAAGTAGGAACGTA
CTTCCTATGTGACCGTCTTGAGGATGGTACGCGTGGGGATGTCAATGTAT
ATAAGTACTTCTTGTTTCTCGCCATCCTGTTGTTCTGCGTTGGTGTAATT
GGCACCTTTGCCCTCAGGATCGTGGATGAGAACGAAGACAAGTACATTGA
CGAGGCGGTAGAGGAGTTGGAGCGCAGTGGCCTCCTTGAGGAGAGCGAGT
TCTTCCGGCCCAGGAACGACGACAGAACCGCATATGGAACGTTTTCGCAG
GCCGAGGACGGCACCGGATCCGATGGAGACCAAACTCTGACACTATGACG
CCATCCCGTGATAAGCCCGATTCAGCTATCGACAAGAGGGATTTTGATGC
TCATCGCCCGTTACTCGATGATGCAGATGCTGAGGCGGATGAGCAACAAC
GAGGACACCTACGGTCACGGCCACAGTCGTGTTTATCGGCCACCAACAAT
GACGATGGTCTCCTGAATGATGTTGTCGACGAGATCCTAGAAAGGGATAG
AAAGAAGATGGCCAAGGAAGTGGTGCGAGTTAGCAGTTTTGCGTGGGGAG
TTATTAGCTGCCCTGATTGGTCTCGGCTACGGCAGTGCCTTTTCTCTCGT
CCCGATTATCATCTCTGTCGTCTGGGGAGTCGAGAACTTTGCCACCAACT
GGGGTATCGTTGCCATGGTTCCAGCCGCCGGAGCCGTTGTCTGGGGTTTG
GTCTATTCGCAAGGGTACCAGGATGCCATGGACGACGGAAATGGCACGAA
TGACGGCCAATGTCATGGCTGGAGGTGCTTTGGATTCTGGGCCGTGGGAT
GTACGGTAAGCGTTTGGATCGCCATTGGGGCTTGGTTGATTGCGTGGAGG
TATTGGAGACGACGAGGAGTTGTTGTTTAACTGGGCACTATTGTCCAATC
CTTGACTCCTGTATCAAATATTACAAATGCCTCGTCACCTGCAGGCTTAC
CATCAACCCATGTCAGCACCATCGCGCTGACCTCGACCATTGCCCGACTT
CTCACCGGCTCGCTCTCCGACCTCTTCGCCCCTCCAGCAACTCATCTCTT
CCCTGGATCTTCCTCCAGGACAAGTCAATGTGGTGGCTTGCCATTGGCTT
CTTCCTGGTCACTGGGCCAGGAGAGGCATATATCAATAACTCTTGGAGCT
GGTAGCATTACCGCATTCTCGCTCTACGGACCCCTGTTGCTCACTCGTCT
CCACTACACTCAACTCCGGGTCAATGCTGTCGCAATCGCCGCGGAGGTCT
CGATGTACTTACCTGTCCCGCTGTTTGGATATCTGTGTGATCGGTACAGC
CCATCTCCGCTGGCCTTATTCTCTGGTTTCGTGTTTGGGGCTGGGTACCT
TCTGGCTGCACTGGCCTTCAAGAGTGGACCACCTCCTGATGCAGGTGGCG
ACGGCTGGCCATTTTGGGTGATGATTGTGGCATTCATCGCCATTGGCGTT
GCTACCAGTTGCATGTACTTGGCTGCGGTCGCAACATGTGCCAAAAATTT
CGGCAGGGGTAAGCATAAGGGAATCATGCTTGCTGTTCCTATCGCGGGTT
TTGGCCTTAGTGGCATGTGGCAAAGCCAAGTAGGAACGTACTTCCTATGT
GACCGTCTTGAGGATGGTACGCGTGGGGATGTCAATGTATATAAGTACTT
CTTGTTTCTCGCCATCCTGTTGTTCTGCGTTGGTGTAATTGGCACCTTTG
CCCTCAGGATCGTGGATGAGAACGAAGACAAGTACATTGACGAGGCGGTA
GAGGAGTTGGAGCGCAGTGGCCTCCTTGAGGAGAGCGAGTTCTTCCGGCC
CAGGAACGACGACAGAACCGCATATGGAACGTTTTCGCAGGCCGAGGACG
GCACCGGATCCGATGGAGACCAAACTCTGACACTATGACGCCATCCCGTG
ATAAGCCCGATTCAGCTATCGACAAGAGGGATTTTGATGCTCATCGCCCG
TTACTCGATGATGCAGATGCTGAGGCGGATGAGCAACAACGAGGACACCT
ACGGTCACGGCCACAGTCGTGTTTATCGGCCACCAACAATGACGATGGTC
TCCTGAATGATGTTGTCGACGAGATCCTAGAAAGGGATAGAAAGAAGATG
GCCAAGGAAGTGGTGCGAGTTAGCAGTTTTGCGTGGGGAGTTATTAGCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF06813 |
| DBxref | PFAM:PF07690 |
| Product | Putative monocarboxylate transporter mch1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:2811888..2813877 - |
|
