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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:2833421..2835832+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_20690-T1 ID=CAN33_20690-T1|Name=CAN33_20690-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2412bp|location=Sequence derived from alignment at NKJJ01000011.1:2833421..2835832+ (Aspergillus niger FDAARGOS_311)
ATGGGGGAACCCGCTCATCTAACGCCTCGCCAAATTTGGGCTCAACCGAC
GACAACGACCACCAGGACCTATGAAGCTGACTGCACGCCGTTTCTATTAC
CCAGCTCTGGTATGTGGATTTGTGCTGGGCCCAATGCGGGCCGTCAAGCA
ACTCGCTTCCGTATGGTTACACTGACGCGGCGCTTCGGTGGGTGCTTTGC
AGGTTACGTCTATTTGAATCGCTCCTACTCCATCGCCTTGACCGAAAATG
CCATCTACGATCCCATCTGTACGGGCACGGGCACAGCGACTGCCACGGCT
CATGCGGTCGCCGCGCTCGATGTCACCGACCCTTTTTATTCCTCCGTGAC
CCCGGCGTTGTATGCCATGGGCTGTACGACCGTTGTCAGCTATCTTCTCG
TTATTATTCTTCTCATCACGCCGCGTACGTTTTATGTTGGAGGTCCTGGT
GGGGGTGCGAACTTTCTCGGACGTCATGGTATGATTAGCGGTTCGTATAG
TGGTAATTCGTCGGTGGTCGGCGTTGGTGGTCGCCCGTGGTTGCAGAAGG
TCGCAGCCTTGTTAGTCGCGGTATCGCTCACCATCGCGACTGTGGACTCC
TTCCGTGTGGCTGAACAGCAATACTATTATGGTTACTCCGATGCCGAAGC
GCTGGCCGACGAGGTCATCGACGGTATGGAGATCCGGGTGGTCAGAATCA
TTTCCAGCACCTTTTTGTGGCTGGCCCAGATTCAGACTTTGATTCGGCTA
TTCCCTCGACATAAGGAGAAAATAATGATCAAATGGGCAGGGTTCGCGTT
AATCGTGTTCGATACGACATTTAGTATCCTCGACAAGTTCTTGGTCAAAA
CCGATACCGTTCACCCACGGCTCTATGAAGACGCGATTCCCGCTCTCAGC
TATCTGTTCGAACTTGCACTCAACCTATTGTACGCCGCTTGGGTCATCTT
CTATTCGCTTTCGAAACATCGCTTCGCCTTCTTCCATCCGAAAATGAGGA
ACATCTGCTTGGTGGCCTTGCTATCGTTATGTGCGATCCTTATACCCGTT
GTGTTTTTTGTCCTGGATATCGCAAAACCGAAAATCGCCGGATGGGGTAC
TTATGTCAGGTGGGTTGGTTCGGCTGCAGCAAGTGTCGTGGTTTGGGAAT
GGGTGGAGCGGATCGAAGCATTGGAACGCGATGAGAGGAAGGATGGGATT
CTTGGACGCGAAATATTTGATGGAGATGAGATGTTGGAAGTGACCCCTTC
GGAAGAAGTCGATTGGCCGCGCTACAATCCTGACGGCCATGATCGAGGCG
GAGGCGGTGGAACGTCTTCAGGATGGGGAGGCATGATGGGACTGGCTCAT
CGTCCTTTACGTACGAGGGTGGGTCGCAATTGGCAGTCGAACCTGGAGAA
CCAGCAACACAACATTCCCATGGACCCTCGGCGCCGGCGCATGGCACCCC
GACCAACTCCTCCCCCAGCAGCTATAACGCCTGTTAGTCGGGCCGACACA
ACCAGCGCGGCCAGTACGGTATACAACATACATTATCATCCGGTGTCTAG
TCCAACTCCACCGGTGGCCATGCCTCATATGGAGGAAGAGGACGAAGACA
TAGACGAAACGGTGGCTGCGAAGGAGATGACAACCGAAGGTCAGCAAGCT
GGCCTAGCTCATGATGTGCTGGCACAACAACAGACCCGGGAACAATCCCC
TCAGATTGTGCACGTGGATAAAAGATGGCGAGCGCTGCTGAATCCTTTCA
AACGAAGGCGTGCATCTTTGCCAAGAGAAGTCGCGTCTGCACAGGCCGAG
GAAGAAGGGAATCCCGCAGGTGCTCAAGTGGAACTGCAACGCCATTCTCT
GGATGATAGCGACGATGAGCACAGCTTACAGCACAGGCACGATTTTCGGT
TTGGCTTCCATCGAAGATTGCGACCCGGTTCTGGACGACAAGGCTCCGAC
TCGCCCTTGCCAGTCACGGTCATTCCTGCTAGACGCCGTGGTCAACAGAC
CTGGTCGCCGCAGCAATATCATGAGCCTAGTTCACGAACAACAACTTCGA
ATCAGCGTGTTCCGCCTGGCCGTGATGACCTGCCTGTAAGGGTGATTCAG
CCGCAAACGCGAACTGCTGCTCCATGGAGCGCAGCCGATGGGCAAGGGTT
CAGTCATGGCAACTATGAGCTGCGCTATGACCCTGAAGCTGCGGCACTTG
TGGAACCTGGTGAGAATTGCACTGAATCTCAGCCGGCGCTGGACGCCGAT
GGCTCGGTCAGCGAGCCTACTCGGGGCCGGCTGGGCGCCAACAACCCGAG
CAGGAATTCGACCCGATGGAAGGAGCACCTCTATCACCGGCTCAACCTTT
TCCTGACGAGGTCCCCGAAGATTCACGAGGGTCACATGGCCAGCAGTGAG
GTCCACGTGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:2833421..2835832+ >CAN33_20690-T1 ID=CAN33_20690-T1|Name=CAN33_20690-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2412bp|location=Sequence derived from alignment at NKJJ01000011.1:2833421..2835832+ (Aspergillus niger FDAARGOS_311)
ATGGGGGAACCCGCTCATCTAACGCCTCGCCAAATTTGGGCTCAACCGAC
GACAACGACCACCAGGACCTATGAAGCTGACTGCACGCCGTTTCTATTAC
CCAGCTCTGGTATGTGGATTTGTGCTGGGCCCAATGCGGGCCGTCAAGCA
ACTCGCTTCCGTATGGTTACACTGACGCGGCGCTTCGGTGGGTGCTTTGC
AGGTTACGTCTATTTGAATCGCTCCTACTCCATCGCCTTGACCGAAAATG
CCATCTACGATCCCATCTGTACGGGCACGGGCACAGCGACTGCCACGGCT
CATGCGGTCGCCGCGCTCGATGTCACCGACCCTTTTTATTCCTCCGTGAC
CCCGGCGTTGTATGCCATGGGCTGTACGACCGTTGTCAGCTATCTTCTCG
TTATTATTCTTCTCATCACGCCGCGTACGTTTTATGTTGGAGGTCCTGGT
GGGGGTGCGAACTTTCTCGGACGTCATGGTATGATTAGCGGTTCGTATAG
TGGTAATTCGTCGGTGGTCGGCGTTGGTGGTCGCCCGTGGTTGCAGAAGG
TCGCAGCCTTGTTAGTCGCGGTATCGCTCACCATCGCGACTGTGGACTCC
TTCCGTGTGGCTGAACAGCAATACTATTATGGTTACTCCGATGCCGAAGC
GCTGGCCGACGAGGTCATCGACGGTATGGAGATCCGGGTGGTCAGAATCA
TTTCCAGCACCTTTTTGTGGCTGGCCCAGATTCAGACTTTGATTCGGCTA
TTCCCTCGACATAAGGAGAAAATAATGATCAAATGGGCAGGGTTCGCGTT
AATCGTGTTCGATACGACATTTAGTATCCTCGACAAGTTCTTGGTCAAAA
CCGATACCGTTCACCCACGGCTCTATGAAGACGCGATTCCCGCTCTCAGC
TATCTGTTCGAACTTGCACTCAACCTATTGTACGCCGCTTGGGTCATCTT
CTATTCGCTTTCGAAACATCGCTTCGCCTTCTTCCATCCGAAAATGAGGA
ACATCTGCTTGGTGGCCTTGCTATCGTTATGTGCGATCCTTATACCCGTT
GTGTTTTTTGTCCTGGATATCGCAAAACCGAAAATCGCCGGATGGGGTAC
TTATGTCAGGTGGGTTGGTTCGGCTGCAGCAAGTGTCGTGGTTTGGGAAT
GGGTGGAGCGGATCGAAGCATTGGAACGCGATGAGAGGAAGGATGGGATT
CTTGGACGCGAAATATTTGATGGAGATGAGATGTTGGAAGTGACCCCTTC
GGAAGAAGTCGATTGGCCGCGCTACAATCCTGACGGCCATGATCGAGGCG
GAGGCGGTGGAACGTCTTCAGGATGGGGAGGCATGATGGGACTGGCTCAT
CGTCCTTTACGTACGAGGGTGGGTCGCAATTGGCAGTCGAACCTGGAGAA
CCAGCAACACAACATTCCCATGGACCCTCGGCGCCGGCGCATGGCACCCC
GACCAACTCCTCCCCCAGCAGCTATAACGCCTGTTAGTCGGGCCGACACA
ACCAGCGCGGCCAGTACGGTATACAACATACATTATCATCCGGTGTCTAG
TCCAACTCCACCGGTGGCCATGCCTCATATGGAGGAAGAGGACGAAGACA
TAGACGAAACGGTGGCTGCGAAGGAGATGACAACCGAAGGTCAGCAAGCT
GGCCTAGCTCATGATGTGCTGGCACAACAACAGACCCGGGAACAATCCCC
TCAGATTGTGCACGTGGATAAAAGATGGCGAGCGCTGCTGAATCCTTTCA
AACGAAGGCGTGCATCTTTGCCAAGAGAAGTCGCGTCTGCACAGGCCGAG
GAAGAAGGGAATCCCGCAGGTGCTCAAGTGGAACTGCAACGCCATTCTCT
GGATGATAGCGACGATGAGCACAGCTTACAGCACAGGCACGATTTTCGGT
TTGGCTTCCATCGAAGATTGCGACCCGGTTCTGGACGACAAGGCTCCGAC
TCGCCCTTGCCAGTCACGGTCATTCCTGCTAGACGCCGTGGTCAACAGAC
CTGGTCGCCGCAGCAATATCATGAGCCTAGTTCACGAACAACAACTTCGA
ATCAGCGTGTTCCGCCTGGCCGTGATGACCTGCCTGTAAGGGTGATTCAG
CCGCAAACGCGAACTGCTGCTCCATGGAGCGCAGCCGATGGGCAAGGGTT
CAGTCATGGCAACTATGAGCTGCGCTATGACCCTGAAGCTGCGGCACTTG
TGGAACCTGGTGAGAATTGCACTGAATCTCAGCCGGCGCTGGACGCCGAT
GGCTCGGTCAGCGAGCCTACTCGGGGCCGGCTGGGCGCCAACAACCCGAG
CAGGAATTCGACCCGATGGAAGGAGCACCTCTATCACCGGCTCAACCTTT
TCCTGACGAGGTCCCCGAAGATTCACGAGGGTCACATGGCCAGCAGTGAG
GTCCACGTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR014844 |
| DBxref | PFAM:PF08733 |
| Product | PalH/RIM21 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:2833421..2835832 + |
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