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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:2910281..2911940- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_20820-T1 ID=CAN33_20820-T1|Name=CAN33_20820-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1660bp|location=Sequence derived from alignment at NKJJ01000011.1:2910281..2911940- (Aspergillus niger FDAARGOS_311)
ATGCTCTGCGCAAGTAAGTCGTGCAATCAATCGCTCTTGCCAGTCCGATT
ACTGATAACTGACGTGCAACAGTTTCGGGAGAAGCACCGCAAGTGCCCGT
CGTCTCGCCCAAGAGCGGTATGTCTCAACCTCGAAAGCCTCAATGCGACG
TAATGCGGCTAATGCTCGACTAGGCAGCGTCTTTGAGAAGCGACTGATCG
AAGCCTACATCGCGGAGAATGGAAAGGACCCCGTGAATGGAGAAGAGCTC
TCCACAGACGACCTCATTGATGTCAAATCCCAGCGCGTCGTCCGCCCCAG
ACCTCCCACCCTCACATCCATTCCTTCGTTGCTCAGTGTTTTCCAAGAAG
AATGGGATGCCCTGGCTCTCGAGACCTACACATTGCGACAGACCTTGGCG
CAGACCCGCCAGGAATTGAGCTCCGCGCTCTACCAGCACGATGCCGCCGT
TCGCGTGATTGCTCGTTTGACAAAGGAGAGAGACGAGGCCCGTGATGCCC
TATCCAAGGTCACCGTCGGTGCCAGGAGTGCTGCTGCCTCCGGTGGTGAA
GCTATGCAGGTTGATTCGACCGGTCTGCCCGAGGCCGTTCTGGCACGTGT
TGAGAGCACACAGGCATCGTAAGTTGCTATGTATAGGATTCCACTGTGTT
TGGCATATCTAACAACATACAGGCTGTCTAAGACACGTCGTAAGCGCCCG
GTTCCGGAAGGCTGGGCTACGGGTGATGCCATCTCCACATTCAAGCCTAC
GGAGAGCTCCAACCCTCTTTACCCCGGCAGCAAGGCATTCGCCGTCAACT
CGTCGGGAGAGCTGGCACTCATCGGCGGTGCGGACGGTGCCGTTGGCATC
TATTCCATTCCCCAGAAGCAGGTTGTTCAGAATCTGCAGGCAAACGGACC
AGTTACCGATGCCGCTTGGGCAGGCGAGAAGGCTATTGTGGCATCGTCTA
CGGGCTCCGTGAAGGTCTTCGAGCACGGCAACGAGGTCGCCAACTTCAAC
TCCCATGCTGGAGCCGCAACGGCGCTTGCCGTGCATGCTACCGGTGACAT
TGTTGCCTCGGTTGGCGCTGATAAGAGCTATGTTCTGTATGACCTTACGA
CGAACTCGGTAATCACTCAGATTTTCAGTGACGCATGTGAGTAGCCCGAT
GATGGATTATATATCCGGATATGACTGACTTTTCCTTCCTCTATAGCTCT
TCTCTCGGTCAAGATTCACCCTGATGGTCATTTGGTTGCTGCTGGTGGCG
TGGACGGGCAAATCAAGATCTTCGATATTAAGACTGGCGCGTCCGCTGCC
ACATTCACCATGTCTGGGCCTGTGAAGTCTCTTTTCTTCTCCGAGAACGG
TGTTTTCCTGGCCGCGGTTACCGAGAACTCGACCACTGTGTCCATTTGGG
ATCTCCGTAGCGCACAGGAGAGCAAGGTTCTGGAGACGGGCAGTCAGGTT
GACTCGATTAACTGGGATTACACTGGACAGTTCCTTCTGACCGCAGGACC
TAGTGGCTTGACCGTGCATCAATACACCAAGGCATCCAAGTCGTGGTCCG
AGCCCTTGCGGAGTGCGGTGCCCGCGGTTGCGGCGGCTTGGGGCTCTGCC
GCCCAGGCTATCGTGGCGTTGAATAGCGAGGGAGGCGTGACGGAGCTGAC
GGCACAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:2910281..2911940- >CAN33_20820-T1 ID=CAN33_20820-T1|Name=CAN33_20820-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7155bp|location=Sequence derived from alignment at NKJJ01000011.1:2910281..2911940- (Aspergillus niger FDAARGOS_311)
CTCTTCTCTCGGTCAAGATTCACCCTGATGGTCATTTGGTTGCTGCTGGT
GGCGTGGACGGGCAAATCAAGATCTTCGATATTAAGACTGGCGCGTCCGC
TGCCACATTCACCATGTCTGGGCCTGTGAAGTCTCTTTTCTTCTCCGAGA
ACGGTGTTTTCCTGGCCGCGGTTACCGAGAACTCGACCACTGTGTCCATT
TGGGATCTCCGTAGCGCACAGGAGAGCAAGGTTCTGGAGACGGGCAGTCA
GGTTGACTCGATTAACTGGGATTACACTGGACAGTTCCTTCTGACCGCAG
GACCTAGTGGCTTGACCGTGCATCAATACACCAAGGCATCCAAGTCGTGG
TCCGAGCCCTTGCGGAGTGCGGTGCCCGCGGTTGCGGCGGCTTGGGGCTC
TGCCGCCCAGGCTATCGTGGCGTTGAATAGCGAGGGAGGCGTGACGGAGC
TGACGGCACAGTAAGCTGTCTAAGACACGTCGTAAGCGCCCGGTTCCGGA
AGGCTGGGCTACGGGTGATGCCATCTCCACATTCAAGCCTACGGAGAGCT
CCAACCCTCTTTACCCCGGCAGCAAGGCATTCGCCGTCAACTCGTCGGGA
GAGCTGGCACTCATCGGCGGTGCGGACGGTGCCGTTGGCATCTATTCCAT
TCCCCAGAAGCAGGTTGTTCAGAATCTGCAGGCAAACGGACCAGTTACCG
ATGCCGCTTGGGCAGGCGAGAAGGCTATTGTGGCATCGTCTACGGGCTCC
GTGAAGGTCTTCGAGCACGGCAACGAGGTCGCCAACTTCAACTCCCATGC
TGGAGCCGCAACGGCGCTTGCCGTGCATGCTACCGGTGACATTGTTGCCT
CGGTTGGCGCTGATAAGAGCTATGTTCTGTATGACCTTACGACGAACTCG
GTAATCACTCAGATTTTCAGTGACGCATGCAGCGTCTTTGAGAAGCGACT
GATCGAAGCCTACATCGCGGAGAATGGAAAGGACCCCGTGAATGGAGAAG
AGCTCTCCACAGACGACCTCATTGATGTCAAATCCCAGCGCGTCGTCCGC
CCCAGACCTCCCACCCTCACATCCATTCCTTCGTTGCTCAGTGTTTTCCA
AGAAGAATGGGATGCCCTGGCTCTCGAGACCTACACATTGCGACAGACCT
TGGCGCAGACCCGCCAGGAATTGAGCTCCGCGCTCTACCAGCACGATGCC
GCCGTTCGCGTGATTGCTCGTTTGACAAAGGAGAGAGACGAGGCCCGTGA
TGCCCTATCCAAGGTCACCGTCGGTGCCAGGAGTGCTGCTGCCTCCGGTG
GTGAAGCTATGCAGGTTGATTCGACCGGTCTGCCCGAGGCCGTTCTGGCA
CGTGTTGAGAGCACACAGGCATCTTTCGGGAGAAGCACCGCAAGTGCCCG
TCGTCTCGCCCAAGAGCGATGCTCTGCGCAACTCTTCTCTCGGTCAAGAT
TCACCCTGATGGTCATTTGGTTGCTGCTGGTGGCGTGGACGGGCAAATCA
AGATCTTCGATATTAAGACTGGCGCGTCCGCTGCCACATTCACCATGTCT
GGGCCTGTGAAGTCTCTTTTCTTCTCCGAGAACGGTGTTTTCCTGGCCGC
GGTTACCGAGAACTCGACCACTGTGTCCATTTGGGATCTCCGTAGCGCAC
AGGAGAGCAAGGTTCTGGAGACGGGCAGTCAGGTTGACTCGATTAACTGG
GATTACACTGGACAGTTCCTTCTGACCGCAGGACCTAGTGGCTTGACCGT
GCATCAATACACCAAGGCATCCAAGTCGTGGTCCGAGCCCTTGCGGAGTG
CGGTGCCCGCGGTTGCGGCGGCTTGGGGCTCTGCCGCCCAGGCTATCGTG
GCGTTGAATAGCGAGGGAGGCGTGACGGAGCTGACGGCACAGTAAGCTGT
CTAAGACACGTCGTAAGCGCCCGGTTCCGGAAGGCTGGGCTACGGGTGAT
GCCATCTCCACATTCAAGCCTACGGAGAGCTCCAACCCTCTTTACCCCGG
CAGCAAGGCATTCGCCGTCAACTCGTCGGGAGAGCTGGCACTCATCGGCG
GTGCGGACGGTGCCGTTGGCATCTATTCCATTCCCCAGAAGCAGGTTGTT
CAGAATCTGCAGGCAAACGGACCAGTTACCGATGCCGCTTGGGCAGGCGA
GAAGGCTATTGTGGCATCGTCTACGGGCTCCGTGAAGGTCTTCGAGCACG
GCAACGAGGTCGCCAACTTCAACTCCCATGCTGGAGCCGCAACGGCGCTT
GCCGTGCATGCTACCGGTGACATTGTTGCCTCGGTTGGCGCTGATAAGAG
CTATGTTCTGTATGACCTTACGACGAACTCGGTAATCACTCAGATTTTCA
GTGACGCATGCAGCGTCTTTGAGAAGCGACTGATCGAAGCCTACATCGCG
GAGAATGGAAAGGACCCCGTGAATGGAGAAGAGCTCTCCACAGACGACCT
CATTGATGTCAAATCCCAGCGCGTCGTCCGCCCCAGACCTCCCACCCTCA
CATCCATTCCTTCGTTGCTCAGTGTTTTCCAAGAAGAATGGGATGCCCTG
GCTCTCGAGACCTACACATTGCGACAGACCTTGGCGCAGACCCGCCAGGA
ATTGAGCTCCGCGCTCTACCAGCACGATGCCGCCGTTCGCGTGATTGCTC
GTTTGACAAAGGAGAGAGACGAGGCCCGTGATGCCCTATCCAAGGTCACC
GTCGGTGCCAGGAGTGCTGCTGCCTCCGGTGGTGAAGCTATGCAGGTTGA
TTCGACCGGTCTGCCCGAGGCCGTTCTGGCACGTGTTGAGAGCACACAGG
CATCTTTCGGGAGAAGCACCGCAAGTGCCCGTCGTCTCGCCCAAGAGCGA
TGCTCTGCGCAACTCTTCTCTCGGTCAAGATTCACCCTGATGGTCATTTG
GTTGCTGCTGGTGGCGTGGACGGGCAAATCAAGATCTTCGATATTAAGAC
TGGCGCGTCCGCTGCCACATTCACCATGTCTGGGCCTGTGAAGTCTCTTT
TCTTCTCCGAGAACGGTGTTTTCCTGGCCGCGGTTACCGAGAACTCGACC
ACTGTGTCCATTTGGGATCTCCGTAGCGCACAGGAGAGCAAGGTTCTGGA
GACGGGCAGTCAGGTTGACTCGATTAACTGGGATTACACTGGACAGTTCC
TTCTGACCGCAGGACCTAGTGGCTTGACCGTGCATCAATACACCAAGGCA
TCCAAGTCGTGGTCCGAGCCCTTGCGGAGTGCGGTGCCCGCGGTTGCGGC
GGCTTGGGGCTCTGCCGCCCAGGCTATCGTGGCGTTGAATAGCGAGGGAG
GCGTGACGGAGCTGACGGCACAGTAAGCTGTCTAAGACACGTCGTAAGCG
CCCGGTTCCGGAAGGCTGGGCTACGGGTGATGCCATCTCCACATTCAAGC
CTACGGAGAGCTCCAACCCTCTTTACCCCGGCAGCAAGGCATTCGCCGTC
AACTCGTCGGGAGAGCTGGCACTCATCGGCGGTGCGGACGGTGCCGTTGG
CATCTATTCCATTCCCCAGAAGCAGGTTGTTCAGAATCTGCAGGCAAACG
GACCAGTTACCGATGCCGCTTGGGCAGGCGAGAAGGCTATTGTGGCATCG
TCTACGGGCTCCGTGAAGGTCTTCGAGCACGGCAACGAGGTCGCCAACTT
CAACTCCCATGCTGGAGCCGCAACGGCGCTTGCCGTGCATGCTACCGGTG
ACATTGTTGCCTCGGTTGGCGCTGATAAGAGCTATGTTCTGTATGACCTT
ACGACGAACTCGGTAATCACTCAGATTTTCAGTGACGCATGCAGCGTCTT
TGAGAAGCGACTGATCGAAGCCTACATCGCGGAGAATGGAAAGGACCCCG
TGAATGGAGAAGAGCTCTCCACAGACGACCTCATTGATGTCAAATCCCAG
CGCGTCGTCCGCCCCAGACCTCCCACCCTCACATCCATTCCTTCGTTGCT
CAGTGTTTTCCAAGAAGAATGGGATGCCCTGGCTCTCGAGACCTACACAT
TGCGACAGACCTTGGCGCAGACCCGCCAGGAATTGAGCTCCGCGCTCTAC
CAGCACGATGCCGCCGTTCGCGTGATTGCTCGTTTGACAAAGGAGAGAGA
CGAGGCCCGTGATGCCCTATCCAAGGTCACCGTCGGTGCCAGGAGTGCTG
CTGCCTCCGGTGGTGAAGCTATGCAGGTTGATTCGACCGGTCTGCCCGAG
GCCGTTCTGGCACGTGTTGAGAGCACACAGGCATCTTTCGGGAGAAGCAC
CGCAAGTGCCCGTCGTCTCGCCCAAGAGCGATGCTCTGCGCAACTCTTCT
CTCGGTCAAGATTCACCCTGATGGTCATTTGGTTGCTGCTGGTGGCGTGG
ACGGGCAAATCAAGATCTTCGATATTAAGACTGGCGCGTCCGCTGCCACA
TTCACCATGTCTGGGCCTGTGAAGTCTCTTTTCTTCTCCGAGAACGGTGT
TTTCCTGGCCGCGGTTACCGAGAACTCGACCACTGTGTCCATTTGGGATC
TCCGTAGCGCACAGGAGAGCAAGGTTCTGGAGACGGGCAGTCAGGTTGAC
TCGATTAACTGGGATTACACTGGACAGTTCCTTCTGACCGCAGGACCTAG
TGGCTTGACCGTGCATCAATACACCAAGGCATCCAAGTCGTGGTCCGAGC
CCTTGCGGAGTGCGGTGCCCGCGGTTGCGGCGGCTTGGGGCTCTGCCGCC
CAGGCTATCGTGGCGTTGAATAGCGAGGGAGGCGTGACGGAGCTGACGGC
ACAGTAAGCTGTCTAAGACACGTCGTAAGCGCCCGGTTCCGGAAGGCTGG
GCTACGGGTGATGCCATCTCCACATTCAAGCCTACGGAGAGCTCCAACCC
TCTTTACCCCGGCAGCAAGGCATTCGCCGTCAACTCGTCGGGAGAGCTGG
CACTCATCGGCGGTGCGGACGGTGCCGTTGGCATCTATTCCATTCCCCAG
AAGCAGGTTGTTCAGAATCTGCAGGCAAACGGACCAGTTACCGATGCCGC
TTGGGCAGGCGAGAAGGCTATTGTGGCATCGTCTACGGGCTCCGTGAAGG
TCTTCGAGCACGGCAACGAGGTCGCCAACTTCAACTCCCATGCTGGAGCC
GCAACGGCGCTTGCCGTGCATGCTACCGGTGACATTGTTGCCTCGGTTGG
CGCTGATAAGAGCTATGTTCTGTATGACCTTACGACGAACTCGGTAATCA
CTCAGATTTTCAGTGACGCATGCAGCGTCTTTGAGAAGCGACTGATCGAA
GCCTACATCGCGGAGAATGGAAAGGACCCCGTGAATGGAGAAGAGCTCTC
CACAGACGACCTCATTGATGTCAAATCCCAGCGCGTCGTCCGCCCCAGAC
CTCCCACCCTCACATCCATTCCTTCGTTGCTCAGTGTTTTCCAAGAAGAA
TGGGATGCCCTGGCTCTCGAGACCTACACATTGCGACAGACCTTGGCGCA
GACCCGCCAGGAATTGAGCTCCGCGCTCTACCAGCACGATGCCGCCGTTC
GCGTGATTGCTCGTTTGACAAAGGAGAGAGACGAGGCCCGTGATGCCCTA
TCCAAGGTCACCGTCGGTGCCAGGAGTGCTGCTGCCTCCGGTGGTGAAGC
TATGCAGGTTGATTCGACCGGTCTGCCCGAGGCCGTTCTGGCACGTGTTG
AGAGCACACAGGCATCTTTCGGGAGAAGCACCGCAAGTGCCCGTCGTCTC
GCCCAAGAGCGATGCTCTGCGCAACTCTTCTCTCGGTCAAGATTCACCCT
GATGGTCATTTGGTTGCTGCTGGTGGCGTGGACGGGCAAATCAAGATCTT
CGATATTAAGACTGGCGCGTCCGCTGCCACATTCACCATGTCTGGGCCTG
TGAAGTCTCTTTTCTTCTCCGAGAACGGTGTTTTCCTGGCCGCGGTTACC
GAGAACTCGACCACTGTGTCCATTTGGGATCTCCGTAGCGCACAGGAGAG
CAAGGTTCTGGAGACGGGCAGTCAGGTTGACTCGATTAACTGGGATTACA
CTGGACAGTTCCTTCTGACCGCAGGACCTAGTGGCTTGACCGTGCATCAA
TACACCAAGGCATCCAAGTCGTGGTCCGAGCCCTTGCGGAGTGCGGTGCC
CGCGGTTGCGGCGGCTTGGGGCTCTGCCGCCCAGGCTATCGTGGCGTTGA
ATAGCGAGGGAGGCGTGACGGAGCTGACGGCACAGTAAGCTGTCTAAGAC
ACGTCGTAAGCGCCCGGTTCCGGAAGGCTGGGCTACGGGTGATGCCATCT
CCACATTCAAGCCTACGGAGAGCTCCAACCCTCTTTACCCCGGCAGCAAG
GCATTCGCCGTCAACTCGTCGGGAGAGCTGGCACTCATCGGCGGTGCGGA
CGGTGCCGTTGGCATCTATTCCATTCCCCAGAAGCAGGTTGTTCAGAATC
TGCAGGCAAACGGACCAGTTACCGATGCCGCTTGGGCAGGCGAGAAGGCT
ATTGTGGCATCGTCTACGGGCTCCGTGAAGGTCTTCGAGCACGGCAACGA
GGTCGCCAACTTCAACTCCCATGCTGGAGCCGCAACGGCGCTTGCCGTGC
ATGCTACCGGTGACATTGTTGCCTCGGTTGGCGCTGATAAGAGCTATGTT
CTGTATGACCTTACGACGAACTCGGTAATCACTCAGATTTTCAGTGACGC
ATGCAGCGTCTTTGAGAAGCGACTGATCGAAGCCTACATCGCGGAGAATG
GAAAGGACCCCGTGAATGGAGAAGAGCTCTCCACAGACGACCTCATTGAT
GTCAAATCCCAGCGCGTCGTCCGCCCCAGACCTCCCACCCTCACATCCAT
TCCTTCGTTGCTCAGTGTTTTCCAAGAAGAATGGGATGCCCTGGCTCTCG
AGACCTACACATTGCGACAGACCTTGGCGCAGACCCGCCAGGAATTGAGC
TCCGCGCTCTACCAGCACGATGCCGCCGTTCGCGTGATTGCTCGTTTGAC
AAAGGAGAGAGACGAGGCCCGTGATGCCCTATCCAAGGTCACCGTCGGTG
CCAGGAGTGCTGCTGCCTCCGGTGGTGAAGCTATGCAGGTTGATTCGACC
GGTCTGCCCGAGGCCGTTCTGGCACGTGTTGAGAGCACACAGGCATCTTT
CGGGAGAAGCACCGCAAGTGCCCGTCGTCTCGCCCAAGAGCGATGCTCTG
CGCAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016567 | protein ubiquitination |
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0005515 | protein binding |
| GO:0004842 | ubiquitin-protein transferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092642I5 |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR013915 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR003613 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF08606 |
| Product | Prp19/Pso4-like family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:2910281..2911940 - |
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