You are here

Home

CAN33_20825-T1, CAN33_20825-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_20825-T1
Unique NameCAN33_20825-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2912362..2912906+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_20825-T1 ID=CAN33_20825-T1|Name=CAN33_20825-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=545bp|location=Sequence derived from alignment at NKJJ01000011.1:2912362..2912906+ (Aspergillus niger FDAARGOS_311)
ATGTCATTCAAATCAAAGGATCTCGCATATGGTACGTTGCTTCATCTTCA
CTCCCCGTTGACATCGAAGTAACTAACCATCTTTCAGAGGCGAAGCAGCC
TGCTTTCTTACAGAGACTGAAGAATCAATACGGCGATACCTCTGGACGCC
TCGAAAGACCCATTGCGCGGCCACGGAAACCGAGGGATGACAATGACGAC
GATGCCCCTACCTACGTTGATGAAGAGAGCAACGAGATCATCTCCAAAGA
GGAATACGAAGCTTTAGTTCGTGGCGAAGATAACAAGGATACCGAGGATT
CCCATAAGGACACAAAAGAGCCTGCGACGGGTGAAGAAGGTAAAGCGAAT
ACCCAGGCCGAGGCACCTGTCTCCAAACAGAACGTGGCCGAAATAGGAGG
GCCACGGAAAAGGAAACAGGCCAAAGTAGTGGGAGAGGACAATCCCAGTG
AAGAGACAGAGAAGGTAGAGAAGAAAGAATCAGGCACTCGGAAACCAAAA
CAGAAGAAGAAGATCAAGCTATCCTTTGACGATGATGACTCATAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:2912362..2912906+

>CAN33_20825-T1 ID=CAN33_20825-T1|Name=CAN33_20825-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=978bp|location=Sequence derived from alignment at NKJJ01000011.1:2912362..2912906+ (Aspergillus niger FDAARGOS_311)
ATGTCATTCAAATCAAAGGATCTCGCATATGAGGCGAAGCAGCCTGCTTT
CTTACAGAGACTGAAGAATCAATACGGCGATACCTCTGGACGCCTCGAAA
GACCCATTGCGCGGCCACGGAAACCGAGGGATGACAATGACGACGATGCC
CCTACCTACGTTGATGAAGAGAGCAACGAGATCATCTCCAAAGAGGAATA
CGAAGCTTTAGTTCGTGGCGAAGATAACAAGGATACCGAGGATTCCCATA
AGGACACAAAAGAGCCTGCGACGGGTGAAGAAGGTAAAGCGAATACCCAG
GCCGAGGCACCTGTCTCCAAACAGAACGTGGCCGAAATAGGAGGGCCACG
GAAAAGGAAACAGGCCAAAGTAGTGGGAGAGGACAATCCCAGTGAAGAGA
CAGAGAAGGTAGAGAAGAAAGAATCAGGCACTCGGAAACCAAAACAGAAG
AAGAAGATCAAGCTATCCTTTGACGATGATGACTCATAAATGTCATTCAA
ATCAAAGGATCTCGCATATGAGGCGAAGCAGCCTGCTTTCTTACAGAGAC
TGAAGAATCAATACGGCGATACCTCTGGACGCCTCGAAAGACCCATTGCG
CGGCCACGGAAACCGAGGGATGACAATGACGACGATGCCCCTACCTACGT
TGATGAAGAGAGCAACGAGATCATCTCCAAAGAGGAATACGAAGCTTTAG
TTCGTGGCGAAGATAACAAGGATACCGAGGATTCCCATAAGGACACAAAA
GAGCCTGCGACGGGTGAAGAAGGTAAAGCGAATACCCAGGCCGAGGCACC
TGTCTCCAAACAGAACGTGGCCGAAATAGGAGGGCCACGGAAAAGGAAAC
AGGCCAAAGTAGTGGGAGAGGACAATCCCAGTGAAGAGACAGAGAAGGTA
GAGAAGAAAGAATCAGGCACTCGGAAACCAAAACAGAAGAAGAAGATCAA
GCTATCCTTTGACGATGATGACTCATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_20825CAN33_20825Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20825-T1.exon1CAN33_20825-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_20825-T1.exon2CAN33_20825-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20825-T1.cdsCAN33_20825-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20825-T1CAN33_20825-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027911
DBxrefPFAM:PF15377
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2912362..2912906 +
Powered by Drupal