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CAN33_20835-T1, CAN33_20835-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_20835-T1
Unique NameCAN33_20835-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2917767..2918522-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_20835-T1 ID=CAN33_20835-T1|Name=CAN33_20835-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=756bp|location=Sequence derived from alignment at NKJJ01000011.1:2917767..2918522- (Aspergillus niger FDAARGOS_311)
ATGGCCACTGCACTACCCACTTTGGCCATCCCAGGCCAGCGCCTAGGCTC
AATTGCCTCGTATGCCGCCGGTCCTGGTACACATGTGCAGAACGCAACCA
TCTATGCCTCGATCGCAGGCCCCGTGGTCGTCGATCAAGCGCAACCCAGC
TCCAAAGCAAAGCTCATCTTGAGCGTCTCCCGAACAGGCCCCAAGAAGGC
TGCTGCACCGGCACCCAGCACCAAGGCGTCCGCCAACCCCGCCAACACTG
GAAAGCCGAAGCTGAGATACAACACCCTCCCTGCCGTCGACTCGGTCGTG
TTGGCGCGCGTAACTCGCGTTCAGAAGCGACAAGCCACCGTATCTATTCT
AGTCGTGCTCGACGAATCCGCTAGCTCCCAGCCGCTCAACCCCTCACAGA
CTGCGTCGGACAATGACAACATCGAAGCTATCCTTTCGTCCGCGGCTAAT
CCGGAGAACCACAGCAACTCGGATGAACTTCGCTTCCAGGCTCTGATCCG
CAAGGAGGACGTGCGTGCTGTTGAGAAAGACCGCGTTGTCATGGATGAGA
TGTTCCGTGTTGGGGATATCGTTCGCGGAACGGTTATCTCCCTTGGTGAT
CAAAGCTTCTACTATCTTACCACGGCTAGGAATGATCTGGGTGTCGTTAT
GGCCCGCAGTGAGTCGGGTAATATGATGTTCCCGGTTAGCTGGAAGGAAA
TGAGAGATCCTGTTACTGGGGTTGCGGAGTTGAGGAAGGTAGCTAGGCCG
TTTTGA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:2917767..2918522-

>CAN33_20835-T1 ID=CAN33_20835-T1|Name=CAN33_20835-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=756bp|location=Sequence derived from alignment at NKJJ01000011.1:2917767..2918522- (Aspergillus niger FDAARGOS_311)
ATGGCCACTGCACTACCCACTTTGGCCATCCCAGGCCAGCGCCTAGGCTC
AATTGCCTCGTATGCCGCCGGTCCTGGTACACATGTGCAGAACGCAACCA
TCTATGCCTCGATCGCAGGCCCCGTGGTCGTCGATCAAGCGCAACCCAGC
TCCAAAGCAAAGCTCATCTTGAGCGTCTCCCGAACAGGCCCCAAGAAGGC
TGCTGCACCGGCACCCAGCACCAAGGCGTCCGCCAACCCCGCCAACACTG
GAAAGCCGAAGCTGAGATACAACACCCTCCCTGCCGTCGACTCGGTCGTG
TTGGCGCGCGTAACTCGCGTTCAGAAGCGACAAGCCACCGTATCTATTCT
AGTCGTGCTCGACGAATCCGCTAGCTCCCAGCCGCTCAACCCCTCACAGA
CTGCGTCGGACAATGACAACATCGAAGCTATCCTTTCGTCCGCGGCTAAT
CCGGAGAACCACAGCAACTCGGATGAACTTCGCTTCCAGGCTCTGATCCG
CAAGGAGGACGTGCGTGCTGTTGAGAAAGACCGCGTTGTCATGGATGAGA
TGTTCCGTGTTGGGGATATCGTTCGCGGAACGGTTATCTCCCTTGGTGAT
CAAAGCTTCTACTATCTTACCACGGCTAGGAATGATCTGGGTGTCGTTAT
GGCCCGCAGTGAGTCGGGTAATATGATGTTCCCGGTTAGCTGGAAGGAAA
TGAGAGATCCTGTTACTGGGGTTGCGGAGTTGAGGAAGGTAGCTAGGCCG
TTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000178exosome (RNase complex)
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_20835CAN33_20835Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20835-T1.cdsCAN33_20835-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20835-T1.exon1CAN33_20835-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20835-T1CAN33_20835-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092653O3
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR019495
DBxrefInterPro:IPR025721
DBxrefPFAM:PF10447
DBxrefPFAM:PF14382
ProductExosome component EXOSC1/CSL4 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2917767..2918522 -
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