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CAN33_20925-T1, CAN33_20925-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_20925-T1
Unique NameCAN33_20925-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:2973891..2975635-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_20925-T1 ID=CAN33_20925-T1|Name=CAN33_20925-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1745bp|location=Sequence derived from alignment at NKJJ01000011.1:2973891..2975635- (Aspergillus niger FDAARGOS_311)
ATGGTCAGCGGCTTGGTGAGTACCCGTTATCTCTGCTCTATTGATAAATG
AACCGTTACTAACGTTTTTAGCCTTCCGATGTGAATGAGGCCAATATCAA
GGTATGTTGATCGAAAGGCCTTGGCCTTGGGTTTCTATCGCCATGTTTTC
TTCTCGAAACCTTCGAGGCGCAACGGCTTTCGCGCGCGTTTCGATCCTTG
CCACGTTATCTATATATATTTTATATCACCGTCATGGATTCTTGGTCTTC
AGCATAGGCAGCAAACTCCATTGAAATCTTCGCATGCGGTAATTGCACGC
TGGCACCCTGCGAGTCCGCCGAAGTTGGAGTTCTGCCGTAGTCTTGCGAA
AGGCGTGTTAGCTCGGGCGGATCTTCCAGCCATCCGCCTTTGAAGCCACG
CAGCAGACTGTGCCACAGATGATTGTTGAAACATACCATCTTTGAAACCA
ATCCGATTGGCTACACCCGTACAAAGTCCCACGTTTCGAGGTGTCGGGCA
TCAGCGAGCGCATCAGCCTACCAGCAGTGACCGACTAGTTCGGCAGGTGA
TCAACTGTCAAGCATCATGCTACCGGCGGTCGGTATGGGAAATGTTTCAG
TGTCGGGCAGGAAAGACGCATCTTCCCATATCACCTCCGTGAGACAAATC
GTGTCTTGTTCTCCCTATCATGGGCTGCTAGAGAGGTTCTAGGGAAACAG
AACCATGGATTTGCCGCACACGTAGTCTTCGTGTTGTCTGTCCCCGGGCG
AAGGTTGCTGGCACACACAGCCCGTAGCTTTTGAGGCTAGCGCCTTGTCT
GGTTGCGAAAAGGTCGATGACGATTGCTGAGTGGGTTAGTTGGAAGGGGG
ACACACGATACTGTGAAGGCTTTTGAGGGAGTTCATCGTTGTGGTTCTTG
GGATAAATGCTAGCAGCTCTGTGCTCTAGATATGACAGTGTCTCGGTGTT
CTGGAATGAACCGCCATGCACTGATTACTACTAACCGCCGCTGTGTGCTC
GCTGGTGCTCTTTGGTATCGCGTTTGAAGCCGGTGTCACGCGTTCTTCGA
TGTTTTGGCTCTTCGGAATTCCTTGCGCCTTCTGCATTCTGTTGGCTCGA
CATACTAATTTGGTCTCCTGGTATAGGAATACTTCACAAAGTCAGCAGGT
CCTGTCAAGCGAGTCATGCTCACCTACAACCAAAACGGCACGAGCCGTGG
TATCGCCTCGATCGTGTTCAGCAAGCCCGATACAGCTGCCAAGGCTGCTA
AGGACTTGAATGGACTCCTTGTTGATGGCAGACCCATGAAGGTGAGCTTT
TCACTAACCAATCACTATTCTTACGTATGGACACTAACAAATACTAGATT
GAGGTTGTCGTCGACGCCTCCCACGCTCCTGAGGTCTCTGCCCCTAAGCC
TCTGGGCGAGCGCGTTGCGTAAGTGTCCTCTTCCATTGTCTTGTACTGGG
GAATCATGACTAACCGCGATGAAGACAAACCAAGCCCCAACCGAAGCCCG
CTACCGCTACCAAGGCTGCTGCTGGTGCCAAGGGCCGCAAGGGCCGTGCT
CGTCGCCCTAACGGCCGTGGTAACCGCCCTAAGCCCAAGACTGTGGAGGA
GCTTGATGCTGAGATGGTTGACTACTTCTCTACCACTAACGAGAATGCTG
GCCCTGCGGAGGGCAATGCCCAAGCAAACGGTGCTGCCCCCAGCAGCCTG
CCGCTACCGGCGGCGAAGACCTCGGAATGGCGGAGATCTCCGTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:2973891..2975635-

>CAN33_20925-T1 ID=CAN33_20925-T1|Name=CAN33_20925-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2760bp|location=Sequence derived from alignment at NKJJ01000011.1:2973891..2975635- (Aspergillus niger FDAARGOS_311)
ACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTACCAAGGCTGCTGCTG
GTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCTAACGGCCGTGGTAAC
CGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGCTGAGATGGTTGACTA
CTTCTCTACCACTAACGAGAATGCTGGCCCTGCGGAGGGCAATGCCCAAG
CAAACGGTGCTGCCCCCAGCAGCCTGCCGCTACCGGCGGCGAAGACCTCG
GAATGGCGGAGATCTCCGTAAATTGAGGTTGTCGTCGACGCCTCCCACGC
TCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCGTTGCGAATACTT
CACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCACCTACAACCAAA
ACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGCAAGCCCGATACA
GCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGTTGATGGCAGACC
CATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGATGGTCAGCGGCT
TGACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTACCAAGGCTGCTGC
TGGTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCTAACGGCCGTGGTA
ACCGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGCTGAGATGGTTGAC
TACTTCTCTACCACTAACGAGAATGCTGGCCCTGCGGAGGGCAATGCCCA
AGCAAACGGTGCTGCCCCCAGCAGCCTGCCGCTACCGGCGGCGAAGACCT
CGGAATGGCGGAGATCTCCGTAAATTGAGGTTGTCGTCGACGCCTCCCAC
GCTCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCGTTGCGAATAC
TTCACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCACCTACAACCA
AAACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGCAAGCCCGATA
CAGCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGTTGATGGCAGA
CCCATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGATGGTCAGCGG
CTTGACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTACCAAGGCTGCT
GCTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCTAACGGCCGTGG
TAACCGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGCTGAGATGGTTG
ACTACTTCTCTACCACTAACGAGAATGCTGGCCCTGCGGAGGGCAATGCC
CAAGCAAACGGTGCTGCCCCCAGCAGCCTGCCGCTACCGGCGGCGAAGAC
CTCGGAATGGCGGAGATCTCCGTAAATTGAGGTTGTCGTCGACGCCTCCC
ACGCTCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCGTTGCGAAT
ACTTCACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCACCTACAAC
CAAAACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGCAAGCCCGA
TACAGCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGTTGATGGCA
GACCCATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGATGGTCAGC
GGCTTGACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTACCAAGGCTG
CTGCTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCTAACGGCCGT
GGTAACCGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGCTGAGATGGT
TGACTACTTCTCTACCACTAACGAGAATGCTGGCCCTGCGGAGGGCAATG
CCCAAGCAAACGGTGCTGCCCCCAGCAGCCTGCCGCTACCGGCGGCGAAG
ACCTCGGAATGGCGGAGATCTCCGTAAATTGAGGTTGTCGTCGACGCCTC
CCACGCTCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCGTTGCGA
ATACTTCACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCACCTACA
ACCAAAACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGCAAGCCC
GATACAGCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGTTGATGG
CAGACCCATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGATGGTCA
GCGGCTTGACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTACCAAGGC
TGCTGCTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCTAACGGCC
GTGGTAACCGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGCTGAGATG
GTTGACTACTTCTCTACCACTAACGAGAATGCTGGCCCTGCGGAGGGCAA
TGCCCAAGCAAACGGTGCTGCCCCCAGCAGCCTGCCGCTACCGGCGGCGA
AGACCTCGGAATGGCGGAGATCTCCGTAAATTGAGGTTGTCGTCGACGCC
TCCCACGCTCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCGTTGC
GAATACTTCACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCACCTA
CAACCAAAACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGCAAGC
CCGATACAGCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGTTGAT
GGCAGACCCATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGATGGT
CAGCGGCTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_20925CAN33_20925Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20925-T1CAN33_20925-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20925-T1.cdsCAN33_20925-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20925-T1.exon5CAN33_20925-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_20925-T1.exon4CAN33_20925-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_20925-T1.exon3CAN33_20925-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_20925-T1.exon2CAN33_20925-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_20925-T1.exon1CAN33_20925-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefInterPro:IPR025715
DBxrefPFAM:PF00076
DBxrefPFAM:PF13865
ProductRNA recognition motif family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:2973891..2975635 -
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