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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:2976826..2977574- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_20930-T1 ID=CAN33_20930-T1|Name=CAN33_20930-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=749bp|location=Sequence derived from alignment at NKJJ01000011.1:2976826..2977574- (Aspergillus niger FDAARGOS_311)
ATGGAGACCCTCAAAGCAGTCTTTTTCGGCCCGGATCCTCAAACACAGGC
AAGTGCCGATTTTGTCCAGCCACAATGTCTGGCGCTTCTGACCGTGATTG
CTGTCTCTAGATGAGAAAATGTAACCAGCTCATCCGCGCCAATACCCGAC
AGTTGGATCGTGACATCGCACAACTGAAGACTCTGGAAAGCAAGACACGA
CAATACATTATGAATTCGTCGAAGCGGGCCCAACGCAATCCCTCCCAGGC
CAAGCAGGCCAACATGGAGGCCAAGACCTTTGCACGAGAGCTTGTTCGCA
TTCGCAAGCAGTCTACCCGGTTACATACCAGTCGCGCGCAACTGCAGAGT
GTTCAGATGCAGGTCAATGAGGCCTTCTCGGTTCGGAAGATTCAGGGCAG
CTTGAAGAAATCGACGGGGATTATGAAGGACGTCAACACATTGGTCCGGA
TGCCCGAGCTGAATGCCACGATGCGTCAGCTTTCGACGGAACTGGTGCGG
GCCGGGATCATCGAGGAGATGGTCGATGACGCCATTCCTAACAACGAGTT
ACTGGAGGAAGAGGAAGAGGAAGCAGAGGAGGAGGTCGACAAGGTCCTGC
AGGAGATCCTCCATGGCAAGTTGTCTCAGGTCGAAGGGGTCCAGCCCGAG
AAGCCATTGGAAGAGGCTCCGGAGCCAGAGGACGAGTTCGCGGATCAAGA
AGCGACACTAGAGCAGATGCGAGGACGGCTCGAAGCCTTGAAGAGCTGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:2976826..2977574- >CAN33_20930-T1 ID=CAN33_20930-T1|Name=CAN33_20930-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1380bp|location=Sequence derived from alignment at NKJJ01000011.1:2976826..2977574- (Aspergillus niger FDAARGOS_311)
TTGGATCGTGACATCGCACAACTGAAGACTCTGGAAAGCAAGACACGACA
ATACATTATGAATTCGTCGAAGCGGGCCCAACGCAATCCCTCCCAGGCCA
AGCAGGCCAACATGGAGGCCAAGACCTTTGCACGAGAGCTTGTTCGCATT
CGCAAGCAGTCTACCCGGTTACATACCAGTCGCGCGCAACTGCAGAGTGT
TCAGATGCAGGTCAATGAGGCCTTCTCGGTTCGGAAGATTCAGGGCAGCT
TGAAGAAATCGACGGGGATTATGAAGGACGTCAACACATTGGTCCGGATG
CCCGAGCTGAATGCCACGATGCGTCAGCTTTCGACGGAACTGGTGCGGGC
CGGGATCATCGAGGAGATGGTCGATGACGCCATTCCTAACAACGAGTTAC
TGGAGGAAGAGGAAGAGGAAGCAGAGGAGGAGGTCGACAAGGTCCTGCAG
GAGATCCTCCATGGCAAGTTGTCTCAGGTCGAAGGGGTCCAGCCCGAGAA
GCCATTGGAAGAGGCTCCGGAGCCAGAGGACGAGTTCGCGGATCAAGAAG
CGACACTAGAGCAGATGCGAGGACGGCTCGAAGCCTTGAAGAGCTGAATG
GAGACCCTCAAAGCAGTCTTTTTCGGCCCGGATCCTCAAACACAGGCAAG
TGCCGATTTTGTCCAGCCACAATGTCTGGCGCTTCTGACCTTGGATCGTG
ACATCGCACAACTGAAGACTCTGGAAAGCAAGACACGACAATACATTATG
AATTCGTCGAAGCGGGCCCAACGCAATCCCTCCCAGGCCAAGCAGGCCAA
CATGGAGGCCAAGACCTTTGCACGAGAGCTTGTTCGCATTCGCAAGCAGT
CTACCCGGTTACATACCAGTCGCGCGCAACTGCAGAGTGTTCAGATGCAG
GTCAATGAGGCCTTCTCGGTTCGGAAGATTCAGGGCAGCTTGAAGAAATC
GACGGGGATTATGAAGGACGTCAACACATTGGTCCGGATGCCCGAGCTGA
ATGCCACGATGCGTCAGCTTTCGACGGAACTGGTGCGGGCCGGGATCATC
GAGGAGATGGTCGATGACGCCATTCCTAACAACGAGTTACTGGAGGAAGA
GGAAGAGGAAGCAGAGGAGGAGGTCGACAAGGTCCTGCAGGAGATCCTCC
ATGGCAAGTTGTCTCAGGTCGAAGGGGTCCAGCCCGAGAAGCCATTGGAA
GAGGCTCCGGAGCCAGAGGACGAGTTCGCGGATCAAGAAGCGACACTAGA
GCAGATGCGAGGACGGCTCGAAGCCTTGAAGAGCTGAATGGAGACCCTCA
AAGCAGTCTTTTTCGGCCCGGATCCTCAAACACAGGCAAGTGCCGATTTT
GTCCAGCCACAATGTCTGGCGCTTCTGACC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007034 | vacuolar transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926510L |
| DBxref | InterPro:IPR005024 |
| DBxref | PFAM:PF03357 |
| Product | Snf7 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:2976826..2977574 - |
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