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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:3003230..3004212- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_20980-T1 ID=CAN33_20980-T1|Name=CAN33_20980-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=983bp|location=Sequence derived from alignment at NKJJ01000011.1:3003230..3004212- (Aspergillus niger FDAARGOS_311)
ATGGCCTCCAAACCCTTCGCTATCATCGCCGGCGTCGGCCCAGGCACTGT
ACGTACATCTTCCCCCCTCCTTCCCACCACCAACTCCCATACTATATCAA
CCATATCCATCCCTTGAAACAAAACCCAAACAAACAACTAATAAATGAGA
AGGGCGCCTCCATCGCCCGCCGCTTCGCCAAATCCTACCCCATCGTAGTC
CTAGCCCGCAACCCAGCAAACTATCAGCCCGTCGTGGACGAGATCAACTC
CTCCGGCGGTCAAGCCACCGGCATCAGCACCGATTTATCCGACTCGACTG
GTGTCCGCTCCGCCTTTGAGCAGATCAAATCGCAGTTCCAGGGTTCATCA
CTAGCAGCCGCAGTGTTTAACTCGGGCGGTGGATTCGTGAGGAAGCCGTT
TCTTGAGTTAACGGAGACGGAGTTTAGTTCCGGGTTTGAGGGGCAGGGGT
ATGATGCTACTACCTTCATTCCCCTCTCTAATCTTTTAACTGGGTATGGT
ATGCTAATGTGGTGATATAGGAAAGGAGCATTCAACTTCGCACAGAATGT
CCTCCCACTTTTCCCGGCTGAGTCGCAAGGAGGTTTGAAATACCCACCTA
CTCTCATTTTCACCGGCGCTACAGCCAGCGTGAAGGGCTCGGCGCAATTC
GCTTCCTTTGCTGCGGGCAAGTTCGCGCTTAGGGCGTTGGCGCAGTCGTT
GGCGAGAGAGTTCGGGCCTAAGGGCATTCATGTCTCCCATGTTATTATTG
ATGGGGTTATTGATATCCCGAGGACGAAGGGGTGGGTGTTCGAGAAGGAG
GATGCCAAGTTGGATCCTGAGGCTGTAAGTTATCTCATTTTCCTTTCGCT
GTTTGGTTGCTTGTTTTGGGGGTGAGATGCTGATGTTGCATAGATTGCCG
ATTCGTATTGGCATTTACATACGCAGCCCAGGACGACGTTTGGGTTTGAG
TTGGATTTGAGACCGTATGTTGAGAGGTGGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:3003230..3004212- >CAN33_20980-T1 ID=CAN33_20980-T1|Name=CAN33_20980-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2952bp|location=Sequence derived from alignment at NKJJ01000011.1:3003230..3004212- (Aspergillus niger FDAARGOS_311)
ATTGCCGATTCGTATTGGCATTTACATACGCAGCCCAGGACGACGTTTGG
GTTTGAGTTGGATTTGAGACCGTATGTTGAGAGGTGGTGAGAAAGGAGCA
TTCAACTTCGCACAGAATGTCCTCCCACTTTTCCCGGCTGAGTCGCAAGG
AGGTTTGAAATACCCACCTACTCTCATTTTCACCGGCGCTACAGCCAGCG
TGAAGGGCTCGGCGCAATTCGCTTCCTTTGCTGCGGGCAAGTTCGCGCTT
AGGGCGTTGGCGCAGTCGTTGGCGAGAGAGTTCGGGCCTAAGGGCATTCA
TGTCTCCCATGTTATTATTGATGGGGTTATTGATATCCCGAGGACGAAGG
GGTGGGTGTTCGAGAAGGAGGATGCCAAGTTGGATCCTGAGGCTGGCGCC
TCCATCGCCCGCCGCTTCGCCAAATCCTACCCCATCGTAGTCCTAGCCCG
CAACCCAGCAAACTATCAGCCCGTCGTGGACGAGATCAACTCCTCCGGCG
GTCAAGCCACCGGCATCAGCACCGATTTATCCGACTCGACTGGTGTCCGC
TCCGCCTTTGAGCAGATCAAATCGCAGTTCCAGGGTTCATCACTAGCAGC
CGCAGTGTTTAACTCGGGCGGTGGATTCGTGAGGAAGCCGTTTCTTGAGT
TAACGGAGACGGAGTTTAGTTCCGGGTTTGAGGGGCAGGGATGGCCTCCA
AACCCTTCGCTATCATCGCCGGCGTCGGCCCAGGCACTATTGCCGATTCG
TATTGGCATTTACATACGCAGCCCAGGACGACGTTTGGGTTTGAGTTGGA
TTTGAGACCGTATGTTGAGAGGTGGTGAGAAAGGAGCATTCAACTTCGCA
CAGAATGTCCTCCCACTTTTCCCGGCTGAGTCGCAAGGAGGTTTGAAATA
CCCACCTACTCTCATTTTCACCGGCGCTACAGCCAGCGTGAAGGGCTCGG
CGCAATTCGCTTCCTTTGCTGCGGGCAAGTTCGCGCTTAGGGCGTTGGCG
CAGTCGTTGGCGAGAGAGTTCGGGCCTAAGGGCATTCATGTCTCCCATGT
TATTATTGATGGGGTTATTGATATCCCGAGGACGAAGGGGTGGGTGTTCG
AGAAGGAGGATGCCAAGTTGGATCCTGAGGCTGGCGCCTCCATCGCCCGC
CGCTTCGCCAAATCCTACCCCATCGTAGTCCTAGCCCGCAACCCAGCAAA
CTATCAGCCCGTCGTGGACGAGATCAACTCCTCCGGCGGTCAAGCCACCG
GCATCAGCACCGATTTATCCGACTCGACTGGTGTCCGCTCCGCCTTTGAG
CAGATCAAATCGCAGTTCCAGGGTTCATCACTAGCAGCCGCAGTGTTTAA
CTCGGGCGGTGGATTCGTGAGGAAGCCGTTTCTTGAGTTAACGGAGACGG
AGTTTAGTTCCGGGTTTGAGGGGCAGGGATGGCCTCCAAACCCTTCGCTA
TCATCGCCGGCGTCGGCCCAGGCACTATTGCCGATTCGTATTGGCATTTA
CATACGCAGCCCAGGACGACGTTTGGGTTTGAGTTGGATTTGAGACCGTA
TGTTGAGAGGTGGTGAGAAAGGAGCATTCAACTTCGCACAGAATGTCCTC
CCACTTTTCCCGGCTGAGTCGCAAGGAGGTTTGAAATACCCACCTACTCT
CATTTTCACCGGCGCTACAGCCAGCGTGAAGGGCTCGGCGCAATTCGCTT
CCTTTGCTGCGGGCAAGTTCGCGCTTAGGGCGTTGGCGCAGTCGTTGGCG
AGAGAGTTCGGGCCTAAGGGCATTCATGTCTCCCATGTTATTATTGATGG
GGTTATTGATATCCCGAGGACGAAGGGGTGGGTGTTCGAGAAGGAGGATG
CCAAGTTGGATCCTGAGGCTGGCGCCTCCATCGCCCGCCGCTTCGCCAAA
TCCTACCCCATCGTAGTCCTAGCCCGCAACCCAGCAAACTATCAGCCCGT
CGTGGACGAGATCAACTCCTCCGGCGGTCAAGCCACCGGCATCAGCACCG
ATTTATCCGACTCGACTGGTGTCCGCTCCGCCTTTGAGCAGATCAAATCG
CAGTTCCAGGGTTCATCACTAGCAGCCGCAGTGTTTAACTCGGGCGGTGG
ATTCGTGAGGAAGCCGTTTCTTGAGTTAACGGAGACGGAGTTTAGTTCCG
GGTTTGAGGGGCAGGGATGGCCTCCAAACCCTTCGCTATCATCGCCGGCG
TCGGCCCAGGCACTATTGCCGATTCGTATTGGCATTTACATACGCAGCCC
AGGACGACGTTTGGGTTTGAGTTGGATTTGAGACCGTATGTTGAGAGGTG
GTGAGAAAGGAGCATTCAACTTCGCACAGAATGTCCTCCCACTTTTCCCG
GCTGAGTCGCAAGGAGGTTTGAAATACCCACCTACTCTCATTTTCACCGG
CGCTACAGCCAGCGTGAAGGGCTCGGCGCAATTCGCTTCCTTTGCTGCGG
GCAAGTTCGCGCTTAGGGCGTTGGCGCAGTCGTTGGCGAGAGAGTTCGGG
CCTAAGGGCATTCATGTCTCCCATGTTATTATTGATGGGGTTATTGATAT
CCCGAGGACGAAGGGGTGGGTGTTCGAGAAGGAGGATGCCAAGTTGGATC
CTGAGGCTGGCGCCTCCATCGCCCGCCGCTTCGCCAAATCCTACCCCATC
GTAGTCCTAGCCCGCAACCCAGCAAACTATCAGCCCGTCGTGGACGAGAT
CAACTCCTCCGGCGGTCAAGCCACCGGCATCAGCACCGATTTATCCGACT
CGACTGGTGTCCGCTCCGCCTTTGAGCAGATCAAATCGCAGTTCCAGGGT
TCATCACTAGCAGCCGCAGTGTTTAACTCGGGCGGTGGATTCGTGAGGAA
GCCGTTTCTTGAGTTAACGGAGACGGAGTTTAGTTCCGGGTTTGAGGGGC
AGGGATGGCCTCCAAACCCTTCGCTATCATCGCCGGCGTCGGCCCAGGCA
CT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:3003230..3004212 - |
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