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CAN33_20985-T1, CAN33_20985-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_20985-T1
Unique NameCAN33_20985-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:3004999..3007265+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_20985-T1 ID=CAN33_20985-T1|Name=CAN33_20985-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2267bp|location=Sequence derived from alignment at NKJJ01000011.1:3004999..3007265+ (Aspergillus niger FDAARGOS_311)
ATGGATACCGACAAAGCAGCAGAAACAACGCGTCTTCACGAGGAAAACGA
AGATCCAGCTGTCAAAGACGTCATCCGCGTCGCCTCATATCATCGACTCG
ACTACGATCTAGCAGTCATCAGAACTTTCCCTAGACCCCACCACCTCATA
CGTGACTTGCTGACCCCCAAAACCCTTATCATCGACCTGAATTCAAGACT
GGGTGTCCTGGATGTCTTCCCACTAGAATTCATCCACGAAATATGTCTCA
TGCTTGATGTCCAATCCTTGTTCCGCTTCCACCGAGTCAACCGTCGTGCT
CGACAAATAGCTAGCGCCAGTGGATACTACAAAGCAGTAGTCAAACATGC
CATCGGGGCTCTGTTCGTTATCCTAAGAACAGGCATGGCATCTTGGTACA
AATTATCGGACCTATATGACGTCCTCTGCACAAAGAACTGTGCAATCTGC
AACGACTTTGGCGGCTTTATCTTCCTTCCATCGTTCATGAGATGTTGTTT
CTTCTGCATTGAGGACGACGAACTTCCTCCCGTTCTGCCTGCTTCTCAAG
CCAGACCATACCTGAACCGGCGTTCAGCCCCTCCTCTCTCCAGTCGGATC
CCTATGATAAAGACGCTGCCTGGAATATACTCGTTGGATGAATCAAAGCG
AACCAGAAGATTCGAACTTGTACTGGAACAATCAGCCATCTCGCTCTTCT
CGTCTGACCGGGTTCCAACTTTCCCGAAGAAGTACTCTAGGGACACAGAG
CTACAGCGTTACATGGTCAGTACGGCCCTACCTTACCTCGACAATAAGAA
CGATGTCATCGAGAAGGGTGTCTCCTGCAGTGGCTGCCAGATTTCTCTGG
AGAAGGCCTTGCAATCGTCAGGGGCCGAATATGATGTCTGGGATGACCGA
GATAAAATTTATTCGCATGATCAATTCATGGAACATTTTGAGACTTGTCC
AGAGGCTCGCAAGCTTTGGGAACTAAGCGAAGGGGCACAATCGAGCCTGA
TATCCCGGCGTTTGTTAAGAATGGAGGCTGCGCTAAGAAGAGGGAGATAA
AAAATGTCTTTTATCATTGAATAGCATGTACAGGGGATTGGTTGTTGGAT
GATGTGGGGTTTTGAGAATTTCTGAGGCAATATTCAGGGAAGTAATGGAA
TCCAGGATAGTAATGCAATTGAAATAATTCTCCTTCAGTATGATACCGAC
CAGACATGTATGATAGGCGCACATGCAGATGATCATAGCGCACATTTCCA
ATAGGAGACTCCCCACCCCCGCTTCTCTCACTGCAAAGTATTGACCCAGT
GCTTAGTCCATACTCGAGATGCTAGTCAAGTCTTCCCATTAGAGATAGTT
TCTCTTGAAGATTACCTCTTTCCATGAAGACAACTGACTTTCTGGAATCC
CACCCACCACTATCTCCTACAAAGCCTCTTCCGCACTAACTCAATGAGCC
CAACCCATCCCTGCCCTATGATACTCTCAATGGATGTCTCCAGTATGGAT
GACAGCGACTACCGAATATTAATACAAACCGGGTCAGATACTTGACAATT
CGTCCCGGTACATTCGACCGCGCAACCCTTTCCATGCCTCTCAGTTCATT
GCCTGACCTTCCGAAAGACTGCACCTGGAATTCTGCGCATCTCAGCCGAG
ATAAATCCAGCGGTGAACTCGTGGTAGAACTACAAAAACGAGACCTTGTT
GGCATAGCGGATGTCTGGCATCCTTCGCAGGTTGACTGTCTCAAGCTTAG
ACGGACAAGGCAGCTTACAGCTACTACATTCGAAGCAACTTACTGCGGTA
GTGAGCCGATAAGCTCTCCTCCTCTGAACGAGGACACTACAGTAATTGCC
AAAGTTGCCCGGTTTGAGTGGGAAATACCTCGTTTATCCCAAGAGACTTC
CATATACAAACAGCTACAGGACACCGGTCTTGCTCCACGCTTTCTTGGCC
ATGTCCATGAGCACGGGCGTGTGATTGGCTTCATACTCGAAAGGCTCAAA
GGGCGTGAAGCGGGCATCAAAGATCTTCCGCTATGTCAATCCGTGCTCAA
ACGCCTGCACGATATCGGTATCCTTCATGGCGATGTCAACCGATATAACT
TTATCGTTCGAGGTGATGCAGTTCGCTTGATTGACTTTGAGAGAAGTCAG
CAATCCAAGGGCGCGACTACGCTGATGCATGCTGAAATGGAGAGTTTATG
TGAACAACTATTGGAGGATACAGGACGCGGTGCAGGTTTCACTCGGTCGA
ATCAGCAGATTGAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000011.1:3004999..3007265+

>CAN33_20985-T1 ID=CAN33_20985-T1|Name=CAN33_20985-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3318bp|location=Sequence derived from alignment at NKJJ01000011.1:3004999..3007265+ (Aspergillus niger FDAARGOS_311)
ATGGATACCGACAAAGCAGCAGAAACAACGCGTCTTCACGAGGAAAACGA
AGATCCAGCTGTCAAAGACGTCATCCGCGTCGCCTCATATCATCGACTCG
ACTACGATCTAGCAGTCATCAGAACTTTCCCTAGACCCCACCACCTCATA
CGTGACTTGCTGACCCCCAAAACCCTTATCATCGACCTGAATTCAAGACT
GGGTGTCCTGGATGTCTTCCCACTAGAATTCATCCACGAAATATGTCTCA
TGCTTGATGTCCAATCCTTGTTCCGCTTCCACCGAGTCAACCGTCGTGCT
CGACAAATAGCTAGCGCCAGTGGATACTACAAAGCAGTAGTCAAACATGC
CATCGGGGCTCTGTTCGTTATCCTAAGAACAGGCATGGCATCTTGGTACA
AATTATCGGACCTATATGACGTCCTCTGCACAAAGAACTGTGCAATCTGC
AACGACTTTGGCGGCTTTATCTTCCTTCCATCGTTCATGAGATGTTGTTT
CTTCTGCATTGAGGACGACGAACTTCCTCCCGTTCTGCCTGCTTCTCAAG
CCAGACCATACCTGAACCGGCGTTCAGCCCCTCCTCTCTCCAGTCGGATC
CCTATGATAAAGACGCTGCCTGGAATATACTCGTTGGATGAATCAAAGCG
AACCAGAAGATTCGAACTTGTACTGGAACAATCAGCCATCTCGCTCTTCT
CGTCTGACCGGGTTCCAACTTTCCCGAAGAAGTACTCTAGGGACACAGAG
CTACAGCGTTACATGGTCAGTACGGCCCTACCTTACCTCGACAATAAGAA
CGATGTCATCGAGAAGGGTGTCTCCTGCAGTGGCTGCCAGATTTCTCTGG
AGAAGGCCTTGCAATCGTCAGGGGCCGAATATGATGTCTGGGATGACCGA
GATAAAATTTATTCGCATGATCAATTCATGGAACATTTTGAGACTTGTCC
AGAGGCTCGCAAGCTTTGGGAACTAAGCGAAGGGGCACAATCGAGCCTGA
TATCCCGGCACTGCACCTGGAATTCTGCGCATCTCAGCCGAGATAAATCC
AGCGGTGAACTCGTGGTAGAACTACAAAAACGAGACCTTGTTGGCATAGC
GGATGTCTGGCATCCTTCGCAGGTTGACTGTCTCAAGCTTAGACGGACAA
GGCAGCTTACAGCTACTACATTCGAAGCAACTTACTGCGGTAGTGAGCCG
ATAAGCTCTCCTCCTCTGAACGAGGACACTACAGTAATTGCCAAAGTTGC
CCGGTTTGAGTGGGAAATACCTCGTTTATCCCAAGAGACTTCCATATACA
AACAGCTACAGGACACCGGTCTTGCTCCACGCTTTCTTGGCCATGTCCAT
GAGCACGGGCGTGTGATTGGCTTCATACTCGAAAGGCTCAAAGGGCGTGA
AGCGGGCATCAAAGATCTTCCGCTATGTCAATCCGTGCTCAAACGCCTGC
ACGATATCGGTATCCTTCATGGCGATGTCAACCGATATAACTTTATCGTT
CGAGGTGATGCAGTTCGCTTGATTGACTTTGAGAGAAGTCAGCAATCCAA
GGGCGCGACTACGCTGATGCATGCTGAAATGGAGAGTTTATGTGAACAAC
TATTGGAGGATACAGGACGCGGTGCAGGTTTCACTCGGTCGAATCAGCAG
ATTGAGTAAATGGATACCGACAAAGCAGCAGAAACAACGCGTCTTCACGA
GGAAAACGAAGATCCAGCTGTCAAAGACGTCATCCGCGTCGCCTCATATC
ATCGACTCGACTACGATCTAGCAGTCATCAGAACTTTCCCTAGACCCCAC
CACCTCATACGTGACTTGCTGACCCCCAAAACCCTTATCATCGACCTGAA
TTCAAGACTGGGTGTCCTGGATGTCTTCCCACTAGAATTCATCCACGAAA
TATGTCTCATGCTTGATGTCCAATCCTTGTTCCGCTTCCACCGAGTCAAC
CGTCGTGCTCGACAAATAGCTAGCGCCAGTGGATACTACAAAGCAGTAGT
CAAACATGCCATCGGGGCTCTGTTCGTTATCCTAAGAACAGGCATGGCAT
CTTGGTACAAATTATCGGACCTATATGACGTCCTCTGCACAAAGAACTGT
GCAATCTGCAACGACTTTGGCGGCTTTATCTTCCTTCCATCGTTCATGAG
ATGTTGTTTCTTCTGCATTGAGGACGACGAACTTCCTCCCGTTCTGCCTG
CTTCTCAAGCCAGACCATACCTGAACCGGCGTTCAGCCCCTCCTCTCTCC
AGTCGGATCCCTATGATAAAGACGCTGCCTGGAATATACTCGTTGGATGA
ATCAAAGCGAACCAGAAGATTCGAACTTGTACTGGAACAATCAGCCATCT
CGCTCTTCTCGTCTGACCGGGTTCCAACTTTCCCGAAGAAGTACTCTAGG
GACACAGAGCTACAGCGTTACATGGTCAGTACGGCCCTACCTTACCTCGA
CAATAAGAACGATGTCATCGAGAAGGGTGTCTCCTGCAGTGGCTGCCAGA
TTTCTCTGGAGAAGGCCTTGCAATCGTCAGGGGCCGAATATGATGTCTGG
GATGACCGAGATAAAATTTATTCGCATGATCAATTCATGGAACATTTTGA
GACTTGTCCAGAGGCTCGCAAGCTTTGGGAACTAAGCGAAGGGGCACAAT
CGAGCCTGATATCCCGGCACTGCACCTGGAATTCTGCGCATCTCAGCCGA
GATAAATCCAGCGGTGAACTCGTGGTAGAACTACAAAAACGAGACCTTGT
TGGCATAGCGGATGTCTGGCATCCTTCGCAGGTTGACTGTCTCAAGCTTA
GACGGACAAGGCAGCTTACAGCTACTACATTCGAAGCAACTTACTGCGGT
AGTGAGCCGATAAGCTCTCCTCCTCTGAACGAGGACACTACAGTAATTGC
CAAAGTTGCCCGGTTTGAGTGGGAAATACCTCGTTTATCCCAAGAGACTT
CCATATACAAACAGCTACAGGACACCGGTCTTGCTCCACGCTTTCTTGGC
CATGTCCATGAGCACGGGCGTGTGATTGGCTTCATACTCGAAAGGCTCAA
AGGGCGTGAAGCGGGCATCAAAGATCTTCCGCTATGTCAATCCGTGCTCA
AACGCCTGCACGATATCGGTATCCTTCATGGCGATGTCAACCGATATAAC
TTTATCGTTCGAGGTGATGCAGTTCGCTTGATTGACTTTGAGAGAAGTCA
GCAATCCAAGGGCGCGACTACGCTGATGCATGCTGAAATGGAGAGTTTAT
GTGAACAACTATTGGAGGATACAGGACGCGGTGCAGGTTTCACTCGGTCG
AATCAGCAGATTGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_20985CAN33_20985Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20985-T1.exon1CAN33_20985-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_20985-T1.exon2CAN33_20985-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20985-T1.cdsCAN33_20985-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_20985-T1CAN33_20985-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011009
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR001810
ProductLipopolysaccharide core biosynthesis protein (WaaY) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:3004999..3007265 +
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