You are here

Home

CAN33_21085-T1, CAN33_21085-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_21085-T1
Unique NameCAN33_21085-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:3081236..3082164+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_21085-T1 ID=CAN33_21085-T1|Name=CAN33_21085-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=929bp|location=Sequence derived from alignment at NKJJ01000011.1:3081236..3082164+ (Aspergillus niger FDAARGOS_311)
ATGCCCAAAGATTACATCGCCCGTCTCGTCTATGATCACACTCACTTGTC
TTTGGCCATCTGCAAAATGCCCCTGGAAATTATTGGCGGAATCACATTCA
GAGAGGTCCGACATCGCAGGTTCGCTGAAATTGTGTTCTGTGCGGCTTCA
TCGGACCAGCAGGTGAAGGGATACGGGGCGCATCTCATGGCCCACTTGAA
GGACTATGTCAGAGCCACATCCCCAGTGATGCATTTTCTAACTTACGCTG
ATAACTACGCAACCGGTTATTTCCAAAAACAAGGCTTCACGAAAGAGATC
ACGCTTGACAAGTCCATCTGGATGGGTTATATTAAGGATTATGAAGGCGG
TACACTCATGCAATGTTCTATGCTCCCCGAATACGGTATCTGGAAGTTGG
TCGTATGCTTCTCAAGCAGAAGGCATGTGTTCTAGCTAAATTACGCCCTT
TGAGCAGAAATCATATTGTACATCCCCCGCCTCCACAATGGGCCAACGGC
ATCGTCACTCTGATCGATCCACTCTCTATTCCTGCTATTCGGGCTACTGG
ATGGTCTCCGGACATGGACGAGCTAGCACGGCAACCACGACATGGACCTC
ATTTTAACGAGCTTCGACGTTTTCTTAGCAAAATACAAGCCCACAAACAA
GCGTGGCCCTTTCTCTCTCCTGTCAACAAAGATGAGGTCCCGGATTACTA
CAACTTCATCGAATCTCCAATGGATCTATCAACGATGGAGGAAAGATTGG
AGAATGACACATATTCTACCCCAAAAGAGCTTATTAACGATCTCAAGTCA
ATCTTTCGCAATTGTCGGCAGTATAATGATGCAACGACGATTTATGCCAA
AAGCGCGACAAAGCTGGAGAAATATATATATTCTCTAATCAAGGAGGTAC
CAGAGTGGTTTGACTTGGTGAAAGAGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:3081236..3082164+

>CAN33_21085-T1 ID=CAN33_21085-T1|Name=CAN33_21085-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1734bp|location=Sequence derived from alignment at NKJJ01000011.1:3081236..3082164+ (Aspergillus niger FDAARGOS_311)
ATGCCCAAAGATTACATCGCCCGTCTCGTCTATGATCACACTCACTTGTC
TTTGGCCATCTGCAAAATGCCCCTGGAAATTATTGGCGGAATCACATTCA
GAGAGGTCCGACATCGCAGGTTCGCTGAAATTGTGTTCTGTGCGGCTTCA
TCGGACCAGCAGGTGAAGGGATACGGGGCGCATCTCATGGCCCACTTGAA
GGACTATGTCAGAGCCACATCCCCAGTGATGCATTTTCTAACTTACGCTG
ATAACTACGCAACCGGTTATTTCCAAAAACAAGGCTTCACGAAAGAGATC
ACGCTTGACAAGTCCATCTGGATGGGTTATATTAAGGATTATGAAGGCGG
TACACTCATGCAATGTTCTATGCTCCCCGAATACGGTATCTGGAAAAATC
ATATTGTACATCCCCCGCCTCCACAATGGGCCAACGGCATCGTCACTCTG
ATCGATCCACTCTCTATTCCTGCTATTCGGGCTACTGGATGGTCTCCGGA
CATGGACGAGCTAGCACGGCAACCACGACATGGACCTCATTTTAACGAGC
TTCGACGTTTTCTTAGCAAAATACAAGCCCACAAACAAGCGTGGCCCTTT
CTCTCTCCTGTCAACAAAGATGAGGTCCCGGATTACTACAACTTCATCGA
ATCTCCAATGGATCTATCAACGATGGAGGAAAGATTGGAGAATGACACAT
ATTCTACCCCAAAAGAGCTTATTAACGATCTCAAGTCAATCTTTCGCAAT
TGTCGGCAGTATAATGATGCAACGACGATTTATGCCAAAAGCGCGACAAA
GCTGGAGAAATATATATATTCTCTAATCAAGGAGGTACCAGAGTGGTTTG
ACTTGGTGAAAGAGTGAATGCCCAAAGATTACATCGCCCGTCTCGTCTAT
GATCACACTCACTTGTCTTTGGCCATCTGCAAAATGCCCCTGGAAATTAT
TGGCGGAATCACATTCAGAGAGGTCCGACATCGCAGGTTCGCTGAAATTG
TGTTCTGTGCGGCTTCATCGGACCAGCAGGTGAAGGGATACGGGGCGCAT
CTCATGGCCCACTTGAAGGACTATGTCAGAGCCACATCCCCAGTGATGCA
TTTTCTAACTTACGCTGATAACTACGCAACCGGTTATTTCCAAAAACAAG
GCTTCACGAAAGAGATCACGCTTGACAAGTCCATCTGGATGGGTTATATT
AAGGATTATGAAGGCGGTACACTCATGCAATGTTCTATGCTCCCCGAATA
CGGTATCTGGAAAAATCATATTGTACATCCCCCGCCTCCACAATGGGCCA
ACGGCATCGTCACTCTGATCGATCCACTCTCTATTCCTGCTATTCGGGCT
ACTGGATGGTCTCCGGACATGGACGAGCTAGCACGGCAACCACGACATGG
ACCTCATTTTAACGAGCTTCGACGTTTTCTTAGCAAAATACAAGCCCACA
AACAAGCGTGGCCCTTTCTCTCTCCTGTCAACAAAGATGAGGTCCCGGAT
TACTACAACTTCATCGAATCTCCAATGGATCTATCAACGATGGAGGAAAG
ATTGGAGAATGACACATATTCTACCCCAAAAGAGCTTATTAACGATCTCA
AGTCAATCTTTCGCAATTGTCGGCAGTATAATGATGCAACGACGATTTAT
GCCAAAAGCGCGACAAAGCTGGAGAAATATATATATTCTCTAATCAAGGA
GGTACCAGAGTGGTTTGACTTGGTGAAAGAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008080N-acetyltransferase activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_21085CAN33_21085Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21085-T1.exon1CAN33_21085-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_21085-T1.exon2CAN33_21085-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21085-T1.cdsCAN33_21085-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21085-T1CAN33_21085-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR016181
DBxrefInterPro:IPR018359
DBxrefInterPro:IPR000182
DBxrefInterPro:IPR036427
DBxrefInterPro:IPR001487
DBxrefPFAM:PF00439
DBxrefPFAM:PF13673
DBxrefPFAM:PF00583
ProductBromodomain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:3081236..3082164 +
Powered by Drupal