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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:3102845..3104805- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_21135-T1 ID=CAN33_21135-T1|Name=CAN33_21135-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1961bp|location=Sequence derived from alignment at NKJJ01000011.1:3102845..3104805- (Aspergillus niger FDAARGOS_311)
ATGCCAGAGGTCATCGATCTCCTCTCCTCCACCCCTCCGCCCCCGTTAGA
GCGACGTGAGCAGCTCTCCATCCGCAGAGCGCATTCTCACCCGCCTGTCG
TACCCGCCTCGGACTCCATCTTCTCCGACGAAATTGACCTCTCCGCATTT
ACCTACGATAACCCCATCGAGCAGCCCGCCAAACGACGGCGCTTGAGCCA
TGAGATCACACCCGTCAAAGATGTACCGCTTCCACCAGCTAAGAACTCGC
TGTTCCTCTTCTCCGATGACGACATAATCTTATCCTCGGACGGTCCCGCC
CCTACAAAACCTCCGGCCTGGAATGGAGAATCCGACCCTATTGTCTTCAC
CTCATCGGCGCCTGAACCCACTCATAATCTACCGGTCAGACCAGCCATAA
GCTCGCGTGCTGTAAACACTATCTCACTCGATGATGATGATGCTGGCAAT
TCCAGTGACACCCGCAGTAACAACCGACCCCGGAAAGAGGCGATTCAAGT
GTCCAGCGACCAATTGGATTTCCCGGATGTCGACGATTTACTTGATGTGG
CCCAGCGAGTCGAAGCAAACGCATTTTCAAGTCGGACTGCGAATCTACTA
GCAACCCTTGAAGACCGTTCCCGTGGCAGCAATGGCGAATCTGCGTCCAG
GTCGTCGAGAGGTCGGAGGATCCAGGATCAAAGCGATGATATAGAGGTTG
AAGAGATGCCGCCACCGCGGAAGCCCCAGCGCAAAGCAACCAAGGTTACA
AGCGAAGAGAAGGAGGCTAAAGCCAGAGAGCGGGAGGCGGCTAAGGCACA
AAGGGAACACGACAGGCAACTTGAAAAGGAGCGCAAGCAGAAAGCCAAGG
AAGATAAAGCCCGCGAAAAGCAACTCGCAGCGGACATTGCTGAGGTCAAC
AAGCTCAAGGTGGACAAGAAGGATTCGACGCATGAGATGCTAATTGACCT
CGCCTCTACATTTACCGACACAAGTCTCGGGAATCAGACCTCGGAGCTTA
TGCGCCTTCTCAAAGTTGATCTCTCATTTTTCCCCAGTACCATTCCGAAT
ATCGTCAAGTGGCGTCGCAAGGTTCGGGCTACATATAACGACTCCCTTGG
TCACTGGGAACCGTGCGCGCTTCACATCCGCGACGAAGAGGAGCATGTCC
TATGTTTGATAGCGGCTCAAGACTTTATCAATATGATCGTGGCCCCAACA
ACCGAACCAAGAAATACTATCAACGACCACGTTGAGCGCCTGAAATTAGC
CTACCCAAAGTCTCGACCGATCTATTTAATCGAAGGCTTGACAAGTCTAA
TGCGGAAGAATAACAATGCACAAAACAGAGCCTACCAAGCCGCTGTGCGA
CGACAATATGAAGACAGCTCTGCCCGTCCGTCAACGCGGAGAAAGCAACA
GCAGCCTGAACCGGTTACGCCTATAGACAGCGACACGGTTGAAGACGCTC
TCCTCGATTTACAGGTGACCCATTCGTGCCTAATCCATCATACAAGCTCC
CCTGCAGAGTCCGCGGAATGGATCAAGAACTTCACTGAGTATATTTCCAC
TGTGCCCTATCGCCGGGAGCGGATGGACTTGAATGACTCCGCATTTTGTA
TGGATGTAGGACAAGTAAAGCCCGGCGAGAACCGATCCGACGCATTCGTG
AAGATGCTCCAGGAGGTGAACCGAGTCACGGCGTCAATGGCATATGGCAT
TGCGACGCAATACCCAAGTGCGATGGATTTGGTAAATGCGATGCGGAAAC
ATGGACCGGGGCTATTAGAAGACGTCAAGGTATATTCCTTTACGGCTCCT
CGCCTTATTCGATTATATCTTTGTCTTGGTACTGACCATTATACTTTCAG
AAATCAGCAAACAAAAACGGCGCCCTCACCGATTCACGCATTGGTCCAGC
CGTGAGCAGACGATTGTATAAAGTATTCATGGGAATGGATCCGACGTCGA
CTGATATTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:3102845..3104805- >CAN33_21135-T1 ID=CAN33_21135-T1|Name=CAN33_21135-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3780bp|location=Sequence derived from alignment at NKJJ01000011.1:3102845..3104805- (Aspergillus niger FDAARGOS_311)
AAATCAGCAAACAAAAACGGCGCCCTCACCGATTCACGCATTGGTCCAGC
CGTGAGCAGACGATTGTATAAAGTATTCATGGGAATGGATCCGACGTCGA
CTGATATTTGAATGCCAGAGGTCATCGATCTCCTCTCCTCCACCCCTCCG
CCCCCGTTAGAGCGACGTGAGCAGCTCTCCATCCGCAGAGCGCATTCTCA
CCCGCCTGTCGTACCCGCCTCGGACTCCATCTTCTCCGACGAAATTGACC
TCTCCGCATTTACCTACGATAACCCCATCGAGCAGCCCGCCAAACGACGG
CGCTTGAGCCATGAGATCACACCCGTCAAAGATGTACCGCTTCCACCAGC
TAAGAACTCGCTGTTCCTCTTCTCCGATGACGACATAATCTTATCCTCGG
ACGGTCCCGCCCCTACAAAACCTCCGGCCTGGAATGGAGAATCCGACCCT
ATTGTCTTCACCTCATCGGCGCCTGAACCCACTCATAATCTACCGGTCAG
ACCAGCCATAAGCTCGCGTGCTGTAAACACTATCTCACTCGATGATGATG
ATGCTGGCAATTCCAGTGACACCCGCAGTAACAACCGACCCCGGAAAGAG
GCGATTCAAGTGTCCAGCGACCAATTGGATTTCCCGGATGTCGACGATTT
ACTTGATGTGGCCCAGCGAGTCGAAGCAAACGCATTTTCAAGTCGGACTG
CGAATCTACTAGCAACCCTTGAAGACCGTTCCCGTGGCAGCAATGGCGAA
TCTGCGTCCAGGTCGTCGAGAGGTCGGAGGATCCAGGATCAAAGCGATGA
TATAGAGGTTGAAGAGATGCCGCCACCGCGGAAGCCCCAGCGCAAAGCAA
CCAAGGTTACAAGCGAAGAGAAGGAGGCTAAAGCCAGAGAGCGGGAGGCG
GCTAAGGCACAAAGGGAACACGACAGGCAACTTGAAAAGGAGCGCAAGCA
GAAAGCCAAGGAAGATAAAGCCCGCGAAAAGCAACTCGCAGCGGACATTG
CTGAGGTCAACAAGCTCAAGGTGGACAAGAAGGATTCGACGCATGAGATG
CTAATTGACCTCGCCTCTACATTTACCGACACAAGTCTCGGGAATCAGAC
CTCGGAGCTTATGCGCCTTCTCAAAGTTGATCTCTCATTTTTCCCCAGTA
CCATTCCGAATATCGTCAAGTGGCGTCGCAAGGTTCGGGCTACATATAAC
GACTCCCTTGGTCACTGGGAACCGTGCGCGCTTCACATCCGCGACGAAGA
GGAGCATGTCCTATGTTTGATAGCGGCTCAAGACTTTATCAATATGATCG
TGGCCCCAACAACCGAACCAAGAAATACTATCAACGACCACGTTGAGCGC
CTGAAATTAGCCTACCCAAAGTCTCGACCGATCTATTTAATCGAAGGCTT
GACAAGTCTAATGCGGAAGAATAACAATGCACAAAACAGAGCCTACCAAG
CCGCTGTGCGACGACAATATGAAGACAGCTCTGCCCGTCCGTCAACGCGG
AGAAAGCAACAGCAGCCTGAACCGGTTACGCCTATAGACAGCGACACGGT
TGAAGACGCTCTCCTCGATTTACAGGTGACCCATTCGTGCCTAATCCATC
ATACAAGCTCCCCTGCAGAGTCCGCGGAATGGATCAAGAACTTCACTGAG
TATATTTCCACTGTGCCCTATCGCCGGGAGCGGATGGACTTGAATGACTC
CGCATTTTGTATGGATGTAGGACAAGTAAAGCCCGGCGAGAACCGATCCG
ACGCATTCGTGAAGATGCTCCAGGAGGTGAACCGAGTCACGGCGTCAATG
GCATATGGCATTGCGACGCAATACCCAAGTGCGATGGATTTGGTAAATGC
GATGCGGAAACATGGACCGGGGCTATTAGAAGACGTCAAGAAATCAGCAA
ACAAAAACGGCGCCCTCACCGATTCACGCATTGGTCCAGCCGTGAGCAGA
CGATTGTATAAAGTATTCATGGGAATGGATCCGACGTCGACTGATATTTG
AATGCCAGAGGTCATCGATCTCCTCTCCTCCACCCCTCCGCCCCCGTTAG
AGCGACGTGAGCAGCTCTCCATCCGCAGAGCGCATTCTCACCCGCCTGTC
GTACCCGCCTCGGACTCCATCTTCTCCGACGAAATTGACCTCTCCGCATT
TACCTACGATAACCCCATCGAGCAGCCCGCCAAACGACGGCGCTTGAGCC
ATGAGATCACACCCGTCAAAGATGTACCGCTTCCACCAGCTAAGAACTCG
CTGTTCCTCTTCTCCGATGACGACATAATCTTATCCTCGGACGGTCCCGC
CCCTACAAAACCTCCGGCCTGGAATGGAGAATCCGACCCTATTGTCTTCA
CCTCATCGGCGCCTGAACCCACTCATAATCTACCGGTCAGACCAGCCATA
AGCTCGCGTGCTGTAAACACTATCTCACTCGATGATGATGATGCTGGCAA
TTCCAGTGACACCCGCAGTAACAACCGACCCCGGAAAGAGGCGATTCAAG
TGTCCAGCGACCAATTGGATTTCCCGGATGTCGACGATTTACTTGATGTG
GCCCAGCGAGTCGAAGCAAACGCATTTTCAAGTCGGACTGCGAATCTACT
AGCAACCCTTGAAGACCGTTCCCGTGGCAGCAATGGCGAATCTGCGTCCA
GGTCGTCGAGAGGTCGGAGGATCCAGGATCAAAGCGATGATATAGAGGTT
GAAGAGATGCCGCCACCGCGGAAGCCCCAGCGCAAAGCAACCAAGGTTAC
AAGCGAAGAGAAGGAGGCTAAAGCCAGAGAGCGGGAGGCGGCTAAGGCAC
AAAGGGAACACGACAGGCAACTTGAAAAGGAGCGCAAGCAGAAAGCCAAG
GAAGATAAAGCCCGCGAAAAGCAACTCGCAGCGGACATTGCTGAGGTCAA
CAAGCTCAAGGTGGACAAGAAGGATTCGACGCATGAGATGCTAATTGACC
TCGCCTCTACATTTACCGACACAAGTCTCGGGAATCAGACCTCGGAGCTT
ATGCGCCTTCTCAAAGTTGATCTCTCATTTTTCCCCAGTACCATTCCGAA
TATCGTCAAGTGGCGTCGCAAGGTTCGGGCTACATATAACGACTCCCTTG
GTCACTGGGAACCGTGCGCGCTTCACATCCGCGACGAAGAGGAGCATGTC
CTATGTTTGATAGCGGCTCAAGACTTTATCAATATGATCGTGGCCCCAAC
AACCGAACCAAGAAATACTATCAACGACCACGTTGAGCGCCTGAAATTAG
CCTACCCAAAGTCTCGACCGATCTATTTAATCGAAGGCTTGACAAGTCTA
ATGCGGAAGAATAACAATGCACAAAACAGAGCCTACCAAGCCGCTGTGCG
ACGACAATATGAAGACAGCTCTGCCCGTCCGTCAACGCGGAGAAAGCAAC
AGCAGCCTGAACCGGTTACGCCTATAGACAGCGACACGGTTGAAGACGCT
CTCCTCGATTTACAGGTGACCCATTCGTGCCTAATCCATCATACAAGCTC
CCCTGCAGAGTCCGCGGAATGGATCAAGAACTTCACTGAGTATATTTCCA
CTGTGCCCTATCGCCGGGAGCGGATGGACTTGAATGACTCCGCATTTTGT
ATGGATGTAGGACAAGTAAAGCCCGGCGAGAACCGATCCGACGCATTCGT
GAAGATGCTCCAGGAGGTGAACCGAGTCACGGCGTCAATGGCATATGGCA
TTGCGACGCAATACCCAAGTGCGATGGATTTGGTAAATGCGATGCGGAAA
CATGGACCGGGGCTATTAGAAGACGTCAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0004518 | nuclease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR042530 |
| DBxref | InterPro:IPR006166 |
| DBxref | PFAM:PF02732 |
| Product | ERCC4 domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:3102845..3104805 - |
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