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CAN33_2125-T1, CAN33_2125-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2125-T1
Unique NameCAN33_2125-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1299552..1300007+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2125-T1 ID=CAN33_2125-T1|Name=CAN33_2125-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=456bp|location=Sequence derived from alignment at NKJJ01000004.1:1299552..1300007+ (Aspergillus niger FDAARGOS_311)
ATGCCCGCACACCTGGGCCACGAGGAGGTACTTCACCTCCACAACCACAA
CAACACCCCCAAAACCAATACTGACCAAACGAACTAGTTCTTCACCTCCC
TCACCACCCTCCTAAGCACCACATCCCAAAAAACCCGCGGATCCGTGTAC
CTCACCCAGAAGCCTCTCCTCGACTCTACCAACACCCAGTCCCAACCATC
CATTCTCATCCGCGCGACAGACGGCAACACCAACGCCCCGAACCCCAAGA
CGGCAGAGGCCAAGAAGAAGGTGTCGAAGGCGACAGCAGCATCGAAAGTG
AAGATCTCGACGGTCGTGAGCCCTGATGACCTGGAGGCGTTCTATGCGCG
GTATGCGGAGGTGTGTAAGGCTGGGATGACGGGGTTGAAGAAGAGGGATC
GGAAGAAGGGCAAGGCGAAGGGGAAGAAGGAGGGTGGGAAGGTTGTTAAG
GGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:1299552..1300007+

>CAN33_2125-T1 ID=CAN33_2125-T1|Name=CAN33_2125-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=792bp|location=Sequence derived from alignment at NKJJ01000004.1:1299552..1300007+ (Aspergillus niger FDAARGOS_311)
ATGCCCGCACACCTGGGCCACGAGGAGTTCTTCACCTCCCTCACCACCCT
CCTAAGCACCACATCCCAAAAAACCCGCGGATCCGTGTACCTCACCCAGA
AGCCTCTCCTCGACTCTACCAACACCCAGTCCCAACCATCCATTCTCATC
CGCGCGACAGACGGCAACACCAACGCCCCGAACCCCAAGACGGCAGAGGC
CAAGAAGAAGGTGTCGAAGGCGACAGCAGCATCGAAAGTGAAGATCTCGA
CGGTCGTGAGCCCTGATGACCTGGAGGCGTTCTATGCGCGGTATGCGGAG
GTGTGTAAGGCTGGGATGACGGGGTTGAAGAAGAGGGATCGGAAGAAGGG
CAAGGCGAAGGGGAAGAAGGAGGGTGGGAAGGTTGTTAAGGGGTGAATGC
CCGCACACCTGGGCCACGAGGAGTTCTTCACCTCCCTCACCACCCTCCTA
AGCACCACATCCCAAAAAACCCGCGGATCCGTGTACCTCACCCAGAAGCC
TCTCCTCGACTCTACCAACACCCAGTCCCAACCATCCATTCTCATCCGCG
CGACAGACGGCAACACCAACGCCCCGAACCCCAAGACGGCAGAGGCCAAG
AAGAAGGTGTCGAAGGCGACAGCAGCATCGAAAGTGAAGATCTCGACGGT
CGTGAGCCCTGATGACCTGGAGGCGTTCTATGCGCGGTATGCGGAGGTGT
GTAAGGCTGGGATGACGGGGTTGAAGAAGAGGGATCGGAAGAAGGGCAAG
GCGAAGGGGAAGAAGGAGGGTGGGAAGGTTGTTAAGGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005786signal recognition particle, endoplasmic reticulum targeting
GO:0048500signal recognition particle
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Molecular Function
TermDefinition
GO:0030942endoplasmic reticulum signal peptide binding
GO:00083127S RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_2125CAN33_2125Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2125-T1.exon1CAN33_2125-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_2125-T1.exon2CAN33_2125-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2125-T1.cdsCAN33_2125-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2125-T1CAN33_2125-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003210
DBxrefInterPro:IPR009018
DBxrefPFAM:PF02290
ProductSignal recognition particle 14kD protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1299552..1300007 +
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