You are here

Home

CAN33_21275-T1, CAN33_21275-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_21275-T1
Unique NameCAN33_21275-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000011.1:3190380..3191676+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_21275-T1 ID=CAN33_21275-T1|Name=CAN33_21275-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1297bp|location=Sequence derived from alignment at NKJJ01000011.1:3190380..3191676+ (Aspergillus niger FDAARGOS_311)
ATGCGTGCGCTCAATGCCAATGTGCCCTGACCTTGGCTGGCATCTGCTTG
CTCGTAATTGTTTCCACAAGGAAATTAAACGGATTGACTAATAAGATTCT
GGTCCATCTTAATCGCTGTAGCGTGCCATTCGCAACTTCCTCAAAGTCCG
TACCAGCTATGATGTCCTTCCGCTCAGTTTTCGACTTATCATGTTCGATA
CGTCGCTGTCTGTCAAGGAGAGCTTGAACATCCTCATACAGAACGGCAAG
TCTTCCTCCCACCCGCTTCCCGCGCCTCCGTGGGCTATGCGCACCGTGAG
TGCACTCTCGCTGACTGGAAAGGGTACATAATACAGGTATCGTTTCGGCT
CCGTTATGGGATTCTACTTCGTCGACCTTTGCCGGCCTCCTTACCACATC
CGACTACATCAATGTCATTCAGTACTACTACCAAAATCCCGAGGCTTTGA
ACCAGATCGATCAATTCCGCTTGGATAGTCTACGAGGTGCGCCTTGTGTT
TTGCAACTGGGTATACACAGGCTGACATTCCTTTCCAGAGGTCGAAAAGG
CGCTCCATGTGGCGCCTCCCGAAACGATATCCATTGACCCAGAGCGGCCA
CTCTACGAGGCCTGTCGGCGCATGCTCGAGTCTCGCGCCAGGAGGATTCC
TTTGGTTACTTTCGACAGTCAGACCGATCGAGCCCTCGTTCTGAGTGTTC
TCACCCAGTACCGCATCCTAAAGTTTGTCGCCGTCAACGTCAATGACACG
CAGAAGTTACGGAAACCCCTTGGTGAGATCTTGCTGGGCTCGTATCACAA
TATCGCAGTCGCATCGATGGATACACCTGTCATTGACGTGATTCACATTC
TCGTCTCACGGAGTATATCAAGTGTCCCCATCATCAATACTGAAGGTAGG
CGATACTACGTTGAAACGCGCATGTATGTGTACTGAAATTCTTATTTTCG
CAGGTGTTGTGTACAACGTCTTCGAGGCTGTCGACGTAATAACGTTGATC
AAAGGAGGTGTATATGATGATCTGAGTCTAACGGTGGGTGAGGCGTTGAA
GAAGCGGTCTCCGGTATGTTCTATCATCAAGGTTTCCGGTACCCTTGGCT
CACTGCTCCAGGACTTCCCCGGTATCTACACATGCTCCCTGAACGATGGT
CTGGATACCATTTTCGACACGATTCGCAAATCCCGTGTACACCGCCTGGT
TGTGGTGGACGACAACTTTCGGCTAAAGGGTGTCCTAACCTTGAGTGATA
TCCTCCAGTATATTCTCTTGGAGGGTGAGAATGACGAGTCATCATGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000011.1:3190380..3191676+

>CAN33_21275-T1 ID=CAN33_21275-T1|Name=CAN33_21275-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6012bp|location=Sequence derived from alignment at NKJJ01000011.1:3190380..3191676+ (Aspergillus niger FDAARGOS_311)
ATGCGTGCGCTCAATGCCAATCGTGCCATTCGCAACTTCCTCAAAGTCCG
TACCAGCTATGATGTCCTTCCGCTCAGTTTTCGACTTATCATGTTCGATA
CGTCGCTGTCTGTCAAGGAGAGCTTGAACATCCTCATACAGAACGGCAAG
TCTTCCTCCCACCCGCTTCCCGCGCCTCCGTGGGCTATGCGCACCGTGAG
TATCGTTTCGGCTCCGTTATGGGATTCTACTTCGTCGACCTTTGCCGGCC
TCCTTACCACATCCGACTACATCAATGTCATTCAGTACTACTACCAAAAT
CCCGAGGCTTTGAACCAGATCGATCAATTCCGCTTGGATAGTCTACGAGA
GGTCGAAAAGGCGCTCCATGTGGCGCCTCCCGAAACGATATCCATTGACC
CAGAGCGGCCACTCTACGAGGCCTGTCGGCGCATGCTCGAGTCTCGCGCC
AGGAGGATTCCTTTGGTTACTTTCGACAGTCAGACCGATCGAGCCCTCGT
TCTGAGTGTTCTCACCCAGTACCGCATCCTAAAGTTTGTCGCCGTCAACG
TCAATGACACGCAGAAGTTACGGAAACCCCTTGGTGAGATCTTGCTGGGC
TCGTATCACAATATCGCAGTCGCATCGATGGATACACCTGTCATTGACGT
GATTCACATTCTCGTCTCACGGAGTATATCAAGTGTCCCCATCATCAATA
CTGAAGGTGTTGTGTACAACGTCTTCGAGGCTGTCGACGTAATAACGTTG
ATCAAAGGAGGTGTATATGATGATCTGAGTCTAACGGTGGGTGAGGCGTT
GAAGAAGCGGTCTCCGGACTTCCCCGGTATCTACACATGCTCCCTGAACG
ATGGTCTGGATACCATTTTCGACACGATTCGCAAATCCCGTGTACACCGC
CTGGTTGTGGTGGACGACAACTTTCGGCTAAAGGGTGTCCTAACCTTGAG
TGATATCCTCCAGTATATTCTCTTGGAGGGTGAGAATGACGAGTCATCAT
GAATGCGTGCGCTCAATGCCAATCGTGCCATTCGCAACTTCCTCAAAGTC
CGTACCAGCTATGATGTCCTTCCGCTCAGTTTTCGACTTATCATGTTCGA
TACGTCGCTGTCTGTCAAGGAGAGCTTGAACATCCTCATACAGAACGGCA
AGTCTTCCTCCCACCCGCTTCCCGCGCCTCCGTGGGCTATGCGCACCGTG
AGTATCGTTTCGGCTCCGTTATGGGATTCTACTTCGTCGACCTTTGCCGG
CCTCCTTACCACATCCGACTACATCAATGTCATTCAGTACTACTACCAAA
ATCCCGAGGCTTTGAACCAGATCGATCAATTCCGCTTGGATAGTCTACGA
GAGGTCGAAAAGGCGCTCCATGTGGCGCCTCCCGAAACGATATCCATTGA
CCCAGAGCGGCCACTCTACGAGGCCTGTCGGCGCATGCTCGAGTCTCGCG
CCAGGAGGATTCCTTTGGTTACTTTCGACAGTCAGACCGATCGAGCCCTC
GTTCTGAGTGTTCTCACCCAGTACCGCATCCTAAAGTTTGTCGCCGTCAA
CGTCAATGACACGCAGAAGTTACGGAAACCCCTTGGTGAGATCTTGCTGG
GCTCGTATCACAATATCGCAGTCGCATCGATGGATACACCTGTCATTGAC
GTGATTCACATTCTCGTCTCACGGAGTATATCAAGTGTCCCCATCATCAA
TACTGAAGGTGTTGTGTACAACGTCTTCGAGGCTGTCGACGTAATAACGT
TGATCAAAGGAGGTGTATATGATGATCTGAGTCTAACGGTGGGTGAGGCG
TTGAAGAAGCGGTCTCCGGACTTCCCCGGTATCTACACATGCTCCCTGAA
CGATGGTCTGGATACCATTTTCGACACGATTCGCAAATCCCGTGTACACC
GCCTGGTTGTGGTGGACGACAACTTTCGGCTAAAGGGTGTCCTAACCTTG
AGTGATATCCTCCAGTATATTCTCTTGGAGGGTGAGAATGACGAGTCATC
ATGAATGCGTGCGCTCAATGCCAATCGTGCCATTCGCAACTTCCTCAAAG
TCCGTACCAGCTATGATGTCCTTCCGCTCAGTTTTCGACTTATCATGTTC
GATACGTCGCTGTCTGTCAAGGAGAGCTTGAACATCCTCATACAGAACGG
CAAGTCTTCCTCCCACCCGCTTCCCGCGCCTCCGTGGGCTATGCGCACCG
TGAGTATCGTTTCGGCTCCGTTATGGGATTCTACTTCGTCGACCTTTGCC
GGCCTCCTTACCACATCCGACTACATCAATGTCATTCAGTACTACTACCA
AAATCCCGAGGCTTTGAACCAGATCGATCAATTCCGCTTGGATAGTCTAC
GAGAGGTCGAAAAGGCGCTCCATGTGGCGCCTCCCGAAACGATATCCATT
GACCCAGAGCGGCCACTCTACGAGGCCTGTCGGCGCATGCTCGAGTCTCG
CGCCAGGAGGATTCCTTTGGTTACTTTCGACAGTCAGACCGATCGAGCCC
TCGTTCTGAGTGTTCTCACCCAGTACCGCATCCTAAAGTTTGTCGCCGTC
AACGTCAATGACACGCAGAAGTTACGGAAACCCCTTGGTGAGATCTTGCT
GGGCTCGTATCACAATATCGCAGTCGCATCGATGGATACACCTGTCATTG
ACGTGATTCACATTCTCGTCTCACGGAGTATATCAAGTGTCCCCATCATC
AATACTGAAGGTGTTGTGTACAACGTCTTCGAGGCTGTCGACGTAATAAC
GTTGATCAAAGGAGGTGTATATGATGATCTGAGTCTAACGGTGGGTGAGG
CGTTGAAGAAGCGGTCTCCGGACTTCCCCGGTATCTACACATGCTCCCTG
AACGATGGTCTGGATACCATTTTCGACACGATTCGCAAATCCCGTGTACA
CCGCCTGGTTGTGGTGGACGACAACTTTCGGCTAAAGGGTGTCCTAACCT
TGAGTGATATCCTCCAGTATATTCTCTTGGAGGGTGAGAATGACGAGTCA
TCATGAATGCGTGCGCTCAATGCCAATCGTGCCATTCGCAACTTCCTCAA
AGTCCGTACCAGCTATGATGTCCTTCCGCTCAGTTTTCGACTTATCATGT
TCGATACGTCGCTGTCTGTCAAGGAGAGCTTGAACATCCTCATACAGAAC
GGCAAGTCTTCCTCCCACCCGCTTCCCGCGCCTCCGTGGGCTATGCGCAC
CGTGAGTATCGTTTCGGCTCCGTTATGGGATTCTACTTCGTCGACCTTTG
CCGGCCTCCTTACCACATCCGACTACATCAATGTCATTCAGTACTACTAC
CAAAATCCCGAGGCTTTGAACCAGATCGATCAATTCCGCTTGGATAGTCT
ACGAGAGGTCGAAAAGGCGCTCCATGTGGCGCCTCCCGAAACGATATCCA
TTGACCCAGAGCGGCCACTCTACGAGGCCTGTCGGCGCATGCTCGAGTCT
CGCGCCAGGAGGATTCCTTTGGTTACTTTCGACAGTCAGACCGATCGAGC
CCTCGTTCTGAGTGTTCTCACCCAGTACCGCATCCTAAAGTTTGTCGCCG
TCAACGTCAATGACACGCAGAAGTTACGGAAACCCCTTGGTGAGATCTTG
CTGGGCTCGTATCACAATATCGCAGTCGCATCGATGGATACACCTGTCAT
TGACGTGATTCACATTCTCGTCTCACGGAGTATATCAAGTGTCCCCATCA
TCAATACTGAAGGTGTTGTGTACAACGTCTTCGAGGCTGTCGACGTAATA
ACGTTGATCAAAGGAGGTGTATATGATGATCTGAGTCTAACGGTGGGTGA
GGCGTTGAAGAAGCGGTCTCCGGACTTCCCCGGTATCTACACATGCTCCC
TGAACGATGGTCTGGATACCATTTTCGACACGATTCGCAAATCCCGTGTA
CACCGCCTGGTTGTGGTGGACGACAACTTTCGGCTAAAGGGTGTCCTAAC
CTTGAGTGATATCCTCCAGTATATTCTCTTGGAGGGTGAGAATGACGAGT
CATCATGAATGCGTGCGCTCAATGCCAATCGTGCCATTCGCAACTTCCTC
AAAGTCCGTACCAGCTATGATGTCCTTCCGCTCAGTTTTCGACTTATCAT
GTTCGATACGTCGCTGTCTGTCAAGGAGAGCTTGAACATCCTCATACAGA
ACGGCAAGTCTTCCTCCCACCCGCTTCCCGCGCCTCCGTGGGCTATGCGC
ACCGTGAGTATCGTTTCGGCTCCGTTATGGGATTCTACTTCGTCGACCTT
TGCCGGCCTCCTTACCACATCCGACTACATCAATGTCATTCAGTACTACT
ACCAAAATCCCGAGGCTTTGAACCAGATCGATCAATTCCGCTTGGATAGT
CTACGAGAGGTCGAAAAGGCGCTCCATGTGGCGCCTCCCGAAACGATATC
CATTGACCCAGAGCGGCCACTCTACGAGGCCTGTCGGCGCATGCTCGAGT
CTCGCGCCAGGAGGATTCCTTTGGTTACTTTCGACAGTCAGACCGATCGA
GCCCTCGTTCTGAGTGTTCTCACCCAGTACCGCATCCTAAAGTTTGTCGC
CGTCAACGTCAATGACACGCAGAAGTTACGGAAACCCCTTGGTGAGATCT
TGCTGGGCTCGTATCACAATATCGCAGTCGCATCGATGGATACACCTGTC
ATTGACGTGATTCACATTCTCGTCTCACGGAGTATATCAAGTGTCCCCAT
CATCAATACTGAAGGTGTTGTGTACAACGTCTTCGAGGCTGTCGACGTAA
TAACGTTGATCAAAGGAGGTGTATATGATGATCTGAGTCTAACGGTGGGT
GAGGCGTTGAAGAAGCGGTCTCCGGACTTCCCCGGTATCTACACATGCTC
CCTGAACGATGGTCTGGATACCATTTTCGACACGATTCGCAAATCCCGTG
TACACCGCCTGGTTGTGGTGGACGACAACTTTCGGCTAAAGGGTGTCCTA
ACCTTGAGTGATATCCTCCAGTATATTCTCTTGGAGGGTGAGAATGACGA
GTCATCATGAATGCGTGCGCTCAATGCCAATCGTGCCATTCGCAACTTCC
TCAAAGTCCGTACCAGCTATGATGTCCTTCCGCTCAGTTTTCGACTTATC
ATGTTCGATACGTCGCTGTCTGTCAAGGAGAGCTTGAACATCCTCATACA
GAACGGCAAGTCTTCCTCCCACCCGCTTCCCGCGCCTCCGTGGGCTATGC
GCACCGTGAGTATCGTTTCGGCTCCGTTATGGGATTCTACTTCGTCGACC
TTTGCCGGCCTCCTTACCACATCCGACTACATCAATGTCATTCAGTACTA
CTACCAAAATCCCGAGGCTTTGAACCAGATCGATCAATTCCGCTTGGATA
GTCTACGAGAGGTCGAAAAGGCGCTCCATGTGGCGCCTCCCGAAACGATA
TCCATTGACCCAGAGCGGCCACTCTACGAGGCCTGTCGGCGCATGCTCGA
GTCTCGCGCCAGGAGGATTCCTTTGGTTACTTTCGACAGTCAGACCGATC
GAGCCCTCGTTCTGAGTGTTCTCACCCAGTACCGCATCCTAAAGTTTGTC
GCCGTCAACGTCAATGACACGCAGAAGTTACGGAAACCCCTTGGTGAGAT
CTTGCTGGGCTCGTATCACAATATCGCAGTCGCATCGATGGATACACCTG
TCATTGACGTGATTCACATTCTCGTCTCACGGAGTATATCAAGTGTCCCC
ATCATCAATACTGAAGGTGTTGTGTACAACGTCTTCGAGGCTGTCGACGT
AATAACGTTGATCAAAGGAGGTGTATATGATGATCTGAGTCTAACGGTGG
GTGAGGCGTTGAAGAAGCGGTCTCCGGACTTCCCCGGTATCTACACATGC
TCCCTGAACGATGGTCTGGATACCATTTTCGACACGATTCGCAAATCCCG
TGTACACCGCCTGGTTGTGGTGGACGACAACTTTCGGCTAAAGGGTGTCC
TAACCTTGAGTGATATCCTCCAGTATATTCTCTTGGAGGGTGAGAATGAC
GAGTCATCATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_21275CAN33_21275Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21275-T1CAN33_21275-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21275-T1.exon1CAN33_21275-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_21275-T1.exon2CAN33_21275-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_21275-T1.exon3CAN33_21275-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_21275-T1.exon4CAN33_21275-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_21275-T1.exon5CAN33_21275-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_21275-T1.exon6CAN33_21275-T1.exon6Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_21275-T1.cdsCAN33_21275-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteBUSCO:EOG0926374A
DBxrefInterPro:IPR000644
DBxrefPFAM:PF00571
ProductCBS domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000011.1supercontigNKJJ01000011.1:3190380..3191676 +
Powered by Drupal