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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:3210059..3211015- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_21310-T1 ID=CAN33_21310-T1|Name=CAN33_21310-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=957bp|location=Sequence derived from alignment at NKJJ01000011.1:3210059..3211015- (Aspergillus niger FDAARGOS_311)
ATGCCTGGAAGTGACGCTCTTCGCGCACTCAAGTTGCTCTCTCGCAGCTC
CGGGGGTCTCCTCTCGGGCGCTGAGACGACCACGGTAAGACCGACGTTTT
TCGATTCCGCTGCTAGTCTTTTGCACATGGCCGAATGCAAGATACTGACC
ATTGATGCCTCGATCTTATAGCAACGATGCCTGGCGAAGACTTTCTCCCG
CTCGATGGCTACCGAGGCCCAGTCTCCCGTTGACAACCTCACGAGGGAGG
TTCCCAAGCCCGTGTGGAATCCCGAACCCGTCAAGGCGACACTCTACTCA
TTTCCCTCGATGGAGCCCCTGCGCTTCGTTGAGTATCCTCGCAACCACCT
CCTGATGCCGCTACGCAAAGACATCCTGCACCGAGCCGTCGTCTACGAGG
GTGACATGACCCGACAAGGTACCGCAAGCACCAAGTGGAGAGATGATGTG
CATGGAAGTGGCAGGAAGTTGCATGCGCAGAAGGGTACTGGCCGGGCCCG
TGTTGGCGACAAGAAATCCCCGATCCGGAGAGGTGGAGGTGTTGCTTTTG
GCCCTCATCCCCGCGACTTCTCTACGGAGCTCCCTCAGAAAATCTACGAC
CAGGCGTGGCGGATAGCCCTCAGTTACCGCTACAAGCGCGGCCAATTGAT
CATTGTCGACAACGAAATCGCCCTTCCGGAAGGTGCCACTCCCCATATTG
TTGAGGAGATTTTCAAGGTCAACTGCTGGGGCCGGCACTATGGACGGTCA
ACATTGATCACGGACCAGCCGAACGAGGAGCTGTTCGAGACGGTGCGTCA
GGCTGGCGAACACGCGAAGATCCTGGACCGCCGTGACGTGGATGTGAAGG
ACCTGTTGGAGACTGGACGCTTGATCATCGAGAAGCAGGCGCTGGACCGC
ATTCTGTCTCAGCATTCCAAGGATCTGAAGAACAAGCCGGCCAAGGCTTT
GTACTAA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:3210059..3211015- >CAN33_21310-T1 ID=CAN33_21310-T1|Name=CAN33_21310-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1740bp|location=Sequence derived from alignment at NKJJ01000011.1:3210059..3211015- (Aspergillus niger FDAARGOS_311)
CAACGATGCCTGGCGAAGACTTTCTCCCGCTCGATGGCTACCGAGGCCCA
GTCTCCCGTTGACAACCTCACGAGGGAGGTTCCCAAGCCCGTGTGGAATC
CCGAACCCGTCAAGGCGACACTCTACTCATTTCCCTCGATGGAGCCCCTG
CGCTTCGTTGAGTATCCTCGCAACCACCTCCTGATGCCGCTACGCAAAGA
CATCCTGCACCGAGCCGTCGTCTACGAGGGTGACATGACCCGACAAGGTA
CCGCAAGCACCAAGTGGAGAGATGATGTGCATGGAAGTGGCAGGAAGTTG
CATGCGCAGAAGGGTACTGGCCGGGCCCGTGTTGGCGACAAGAAATCCCC
GATCCGGAGAGGTGGAGGTGTTGCTTTTGGCCCTCATCCCCGCGACTTCT
CTACGGAGCTCCCTCAGAAAATCTACGACCAGGCGTGGCGGATAGCCCTC
AGTTACCGCTACAAGCGCGGCCAATTGATCATTGTCGACAACGAAATCGC
CCTTCCGGAAGGTGCCACTCCCCATATTGTTGAGGAGATTTTCAAGGTCA
ACTGCTGGGGCCGGCACTATGGACGGTCAACATTGATCACGGACCAGCCG
AACGAGGAGCTGTTCGAGACGGTGCGTCAGGCTGGCGAACACGCGAAGAT
CCTGGACCGCCGTGACGTGGATGTGAAGGACCTGTTGGAGACTGGACGCT
TGATCATCGAGAAGCAGGCGCTGGACCGCATTCTGTCTCAGCATTCCAAG
GATCTGAAGAACAAGCCGGCCAAGGCTTTGTACTAAATGCCTGGAAGTGA
CGCTCTTCGCGCACTCAAGTTGCTCTCTCGCAGCTCCGGGGGTCTCCTCT
CGGGCGCTGAGACGACCACGCAACGATGCCTGGCGAAGACTTTCTCCCGC
TCGATGGCTACCGAGGCCCAGTCTCCCGTTGACAACCTCACGAGGGAGGT
TCCCAAGCCCGTGTGGAATCCCGAACCCGTCAAGGCGACACTCTACTCAT
TTCCCTCGATGGAGCCCCTGCGCTTCGTTGAGTATCCTCGCAACCACCTC
CTGATGCCGCTACGCAAAGACATCCTGCACCGAGCCGTCGTCTACGAGGG
TGACATGACCCGACAAGGTACCGCAAGCACCAAGTGGAGAGATGATGTGC
ATGGAAGTGGCAGGAAGTTGCATGCGCAGAAGGGTACTGGCCGGGCCCGT
GTTGGCGACAAGAAATCCCCGATCCGGAGAGGTGGAGGTGTTGCTTTTGG
CCCTCATCCCCGCGACTTCTCTACGGAGCTCCCTCAGAAAATCTACGACC
AGGCGTGGCGGATAGCCCTCAGTTACCGCTACAAGCGCGGCCAATTGATC
ATTGTCGACAACGAAATCGCCCTTCCGGAAGGTGCCACTCCCCATATTGT
TGAGGAGATTTTCAAGGTCAACTGCTGGGGCCGGCACTATGGACGGTCAA
CATTGATCACGGACCAGCCGAACGAGGAGCTGTTCGAGACGGTGCGTCAG
GCTGGCGAACACGCGAAGATCCTGGACCGCCGTGACGTGGATGTGAAGGA
CCTGTTGGAGACTGGACGCTTGATCATCGAGAAGCAGGCGCTGGACCGCA
TTCTGTCTCAGCATTCCAAGGATCTGAAGAACAAGCCGGCCAAGGCTTTG
TACTAAATGCCTGGAAGTGACGCTCTTCGCGCACTCAAGTTGCTCTCTCG
CAGCTCCGGGGGTCTCCTCTCGGGCGCTGAGACGACCACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264NNY |
| DBxref | InterPro:IPR023574 |
| DBxref | InterPro:IPR002136 |
| DBxref | InterPro:IPR013005 |
| DBxref | PFAM:PF00573 |
| Product | Ribosomal L4/L1 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:3210059..3211015 - |
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