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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:3238374..3238916+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_21355-T1 ID=CAN33_21355-T1|Name=CAN33_21355-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=543bp|location=Sequence derived from alignment at NKJJ01000011.1:3238374..3238916+ (Aspergillus niger FDAARGOS_311)
ATGTCCCTCCAAACCCCCCGCATCCTCCCCTCCCACCTCCACGCCTTCCA
CCCCTCCTCCGCCGGCCCACGCACATCCCATACCGTCCGTATCCTAGGAA
CAGTGACTGCTCTGCGCGGCGACACGGCGACTATGACGTGCGGAAACCAC
GGCGATGTGACGCTCATCTTGAAGCCCGATTCGCATTTGCAGATGGGCAA
GTTGGTGGAGATTATTGGGAAGGTGGCGGATCTGGATAATGGGAGTGTAT
GTTTCAATACCTTATTTTTTCCCCCGCTATAAATGAGGGGTTGTTCTTGG
GTAGGATAATGGCTAATTTTGGTTATGTGGCGTTTAGGGCGTGGGTATTA
GAGTCCTGGGAAGTACGGATTGGGGGAGTCCCGCGGATTGCGGTAGGTTT
TCTTCTTTTCTTATGGACTATGGAGAAGGGGTAAAAGGAAAAAGGTGCTA
ATTGTGGTTGTTGATGTGGCTGCAGATTACACGATCTATGAACAGGTTGT
CAATGCTACGCATAAGCTCAAGCCTATCTTTTATGATGAGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:3238374..3238916+ >CAN33_21355-T1 ID=CAN33_21355-T1|Name=CAN33_21355-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1107bp|location=Sequence derived from alignment at NKJJ01000011.1:3238374..3238916+ (Aspergillus niger FDAARGOS_311)
ATGTCCCTCCAAACCCCCCGCATCCTCCCCTCCCACCTCCACGCCTTCCA
CCCCTCCTCCGCCGGCCCACGCACATCCCATACCGTCCGTATCCTAGGAA
CAGTGACTGCTCTGCGCGGCGACACGGCGACTATGACGTGCGGAAACCAC
GGCGATGTGACGCTCATCTTGAAGCCCGATTCGCATTTGCAGATGGGCAA
GTTGGTGGAGATTATTGGGAAGGTGGCGGATCTGGATAATGGGAGTGGCG
TGGGTATTAGAGTCCTGGGAAGTACGGATTGGGGGAGTCCCGCGGATTGC
GATTACACGATCTATGAACAGGTTGTCAATGCTACGCATAAGCTCAAGCC
TATCTTTTATGATGAGTGAATGTCCCTCCAAACCCCCCGCATCCTCCCCT
CCCACCTCCACGCCTTCCACCCCTCCTCCGCCGGCCCACGCACATCCCAT
ACCGTCCGTATCCTAGGAACAGTGACTGCTCTGCGCGGCGACACGGCGAC
TATGACGTGCGGAAACCACGGCGATGTGACGCTCATCTTGAAGCCCGATT
CGCATTTGCAGATGGGCAAGTTGGTGGAGATTATTGGGAAGGTGGCGGAT
CTGGATAATGGGAGTGGCGTGGGTATTAGAGTCCTGGGAAGTACGGATTG
GGGGAGTCCCGCGGATTGCGATTACACGATCTATGAACAGGTTGTCAATG
CTACGCATAAGCTCAAGCCTATCTTTTATGATGAGTGAATGTCCCTCCAA
ACCCCCCGCATCCTCCCCTCCCACCTCCACGCCTTCCACCCCTCCTCCGC
CGGCCCACGCACATCCCATACCGTCCGTATCCTAGGAACAGTGACTGCTC
TGCGCGGCGACACGGCGACTATGACGTGCGGAAACCACGGCGATGTGACG
CTCATCTTGAAGCCCGATTCGCATTTGCAGATGGGCAAGTTGGTGGAGAT
TATTGGGAAGGTGGCGGATCTGGATAATGGGAGTGGCGTGGGTATTAGAG
TCCTGGGAAGTACGGATTGGGGGAGTCCCGCGGATTGCGATTACACGATC
TATGAACAGGTTGTCAATGCTACGCATAAGCTCAAGCCTATCTTTTATGA
TGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006260 | DNA replication |
| GO:0006281 | DNA repair |
| GO:0006310 | DNA recombination |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR013970 |
| DBxref | PFAM:PF08661 |
| Product | Replication factor A protein 3 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:3238374..3238916 + |
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