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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000011.1:3244022..3244801+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_21365-T1 ID=CAN33_21365-T1|Name=CAN33_21365-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=780bp|location=Sequence derived from alignment at NKJJ01000011.1:3244022..3244801+ (Aspergillus niger FDAARGOS_311)
ATGTCGACCGATCCCAAGATCCAGTAATTACCCCTCTTTTCCTACCCTCC
TTTACATCCCGATGAGTCATTAGCTCTTGTCATGGTGTAATCCGCTCCTC
AACCTGCCGGACCTCATTGCTAACCTTGTCTTGCAATTCATTAGGGACCT
GCTCAACAAGCCTAAGAGCGAGCTCACGTACGTTATCGAACCCCTCCTCT
TCTTTCCGGCTTTTATCAAAGCTTTCTATTCCCGTGTTCCTATCACATGA
TGCCCGATCCCCTTTGCACACCTATCAGTCCAACTACCCATGCCCACCAC
AACCCATGATATCCGGATAGTGTCCCGCGCGCCTAATTCTCATCGCGCCA
CATCATATCTATCTATCTACCAACCCATCATCGCCGTCCATTCGCTAACC
TGGCGCCTCATTCAGTGAATACGAGGTCTCCCTCGTCGAGGAACATGAGC
TCACTGCCGGTCCTTTGTCCCTTCTCCAAACCGCTACGCGCACACACACC
CAGGTCCTGATCTCATGCCGGAACAACCGCAAGCTCCTCGCCCGTGTCAA
GGCCTTCGACCGCCACTGCAACATGGTTCTGGAGAACGTCAAGGAGATGT
GGACCGAGAAGCCCAAGGGTGGTAACGGCAAGGGTGTTAACAAGGATCGC
TTCATCAGCAAGATGTAAGCATCGCCATTACCTACACTCACCCTCTCCCC
CCGCCAGAAACAATCCTAACCCAACCTTTTATCGTAGGTTCCTCCGTGGT
GACTCCGTCATCCTCGTCCTGCTCAGCTGA back to topCoding sequence (CDS) from alignment at NKJJ01000011.1:3244022..3244801+ >CAN33_21365-T1 ID=CAN33_21365-T1|Name=CAN33_21365-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1392bp|location=Sequence derived from alignment at NKJJ01000011.1:3244022..3244801+ (Aspergillus niger FDAARGOS_311)
ATGTCGACCGATCCCAAGATCCAGGACCTGCTCAACAAGCCTAAGAGCGA
GCTCACTGAATACGAGGTCTCCCTCGTCGAGGAACATGAGCTCACTGCCG
GTCCTTTGTCCCTTCTCCAAACCGCTACGCGCACACACACCCAGGTCCTG
ATCTCATGCCGGAACAACCGCAAGCTCCTCGCCCGTGTCAAGGCCTTCGA
CCGCCACTGCAACATGGTTCTGGAGAACGTCAAGGAGATGTGGACCGAGA
AGCCCAAGGGTGGTAACGGCAAGGGTGTTAACAAGGATCGCTTCATCAGC
AAGATGTTCCTCCGTGGTGACTCCGTCATCCTCGTCCTGCTCAGCTGAAT
GTCGACCGATCCCAAGATCCAGGACCTGCTCAACAAGCCTAAGAGCGAGC
TCACTGAATACGAGGTCTCCCTCGTCGAGGAACATGAGCTCACTGCCGGT
CCTTTGTCCCTTCTCCAAACCGCTACGCGCACACACACCCAGGTCCTGAT
CTCATGCCGGAACAACCGCAAGCTCCTCGCCCGTGTCAAGGCCTTCGACC
GCCACTGCAACATGGTTCTGGAGAACGTCAAGGAGATGTGGACCGAGAAG
CCCAAGGGTGGTAACGGCAAGGGTGTTAACAAGGATCGCTTCATCAGCAA
GATGTTCCTCCGTGGTGACTCCGTCATCCTCGTCCTGCTCAGCTGAATGT
CGACCGATCCCAAGATCCAGGACCTGCTCAACAAGCCTAAGAGCGAGCTC
ACTGAATACGAGGTCTCCCTCGTCGAGGAACATGAGCTCACTGCCGGTCC
TTTGTCCCTTCTCCAAACCGCTACGCGCACACACACCCAGGTCCTGATCT
CATGCCGGAACAACCGCAAGCTCCTCGCCCGTGTCAAGGCCTTCGACCGC
CACTGCAACATGGTTCTGGAGAACGTCAAGGAGATGTGGACCGAGAAGCC
CAAGGGTGGTAACGGCAAGGGTGTTAACAAGGATCGCTTCATCAGCAAGA
TGTTCCTCCGTGGTGACTCCGTCATCCTCGTCCTGCTCAGCTGAATGTCG
ACCGATCCCAAGATCCAGGACCTGCTCAACAAGCCTAAGAGCGAGCTCAC
TGAATACGAGGTCTCCCTCGTCGAGGAACATGAGCTCACTGCCGGTCCTT
TGTCCCTTCTCCAAACCGCTACGCGCACACACACCCAGGTCCTGATCTCA
TGCCGGAACAACCGCAAGCTCCTCGCCCGTGTCAAGGCCTTCGACCGCCA
CTGCAACATGGTTCTGGAGAACGTCAAGGAGATGTGGACCGAGAAGCCCA
AGGGTGGTAACGGCAAGGGTGTTAACAAGGATCGCTTCATCAGCAAGATG
TTCCTCCGTGGTGACTCCGTCATCCTCGTCCTGCTCAGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030532 | small nuclear ribonucleoprotein complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008380 | RNA splicing |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265IT6 |
| DBxref | InterPro:IPR010920 |
| DBxref | InterPro:IPR027248 |
| DBxref | InterPro:IPR001163 |
| DBxref | PFAM:PF01423 |
| Product | mRNA splicing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000011.1 | supercontig | NKJJ01000011.1:3244022..3244801 + |
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